Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00307
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 312
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00307

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00307 Chr07 57689465-78240712 Chr06 70648111-89578874 mixed High 200 anchors
Chr07 57689465-78240712 Chr06 70648111-89578874 JCVI_TKOH_00307 · 312 gene pairs TkA07G230460 | LXL04_028847 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G230660 | LXL04_028849 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA07G230700 | LXL04_028850 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA07G231200 | LXL04_028851 | 90.2% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G231230 | LXL04_028853 | 99.3% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G237180 | LXL04_028884 | 96.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G237700 | LXL04_028873 | 96.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G238640 | LXL04_028880 | 52.1% | multi_source_to_OH1004 | Complex TkA07G239270 | LXL04_028878 | 97.8% | sequence_supported_annotation_or_model_conflict | Review TkA07G239950 | LXL04_028868 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA07G240390 | LXL04_028867 | 100.0% | multi_source_to_OH1004 | Complex TkA07G240410 | LXL04_028866 | 100.0% | multi_source_to_OH1004 | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00307 Chr07:57689465-78240712 Chr06:70648111-89578874 mixed 312 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 312 · Showing 1–200 · Page 1/2

TkA07G230460 → LXL04_028847
100.0%
TkA07G230660 → LXL04_028849
99.7%
TkA07G230700 → LXL04_028850
99.4%
TkA07G231200 → LXL04_028851
90.2%
TkA07G231230 → LXL04_028853
99.3%
TkA07G237180 → LXL04_028884
96.5%
TkA07G237700 → LXL04_028873
96.5%
TkA07G238640 → LXL04_028880
52.1%
TkA07G239270 → LXL04_028878
97.8%
TkA07G239950 → LXL04_028868
100.0%
TkA07G240390 → LXL04_028867
100.0%
TkA07G240410 → LXL04_028866
100.0%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA07G230460LXL04_028847JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G230660LXL04_028849JCVI_TKOH_0030799.7100.0 / 100.0Strict
TkA07G230700LXL04_028850JCVI_TKOH_0030799.4100.0 / 100.0Strict
TkA07G231200LXL04_028851JCVI_TKOH_0030790.272.444 / 58.182Review
TkA07G231230LXL04_028853JCVI_TKOH_0030799.350.0 / 45.238Review
TkA07G237180LXL04_028884JCVI_TKOH_0030796.580.189 / 39.535Review
TkA07G237700LXL04_028873JCVI_TKOH_0030796.585.821 / 66.474Review
TkA07G238640LXL04_028880JCVI_TKOH_0030752.147.744 / 57.967Complex
TkA07G239270LXL04_028878JCVI_TKOH_0030797.897.887 / 96.528Review
TkA07G239950LXL04_028868JCVI_TKOH_00307100.0100.0 / 100.0Review
TkA07G240390LXL04_028867JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G240410LXL04_028866JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G240690LXL04_028857JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G240730LXL04_028858JCVI_TKOH_0030799.068.085 / 51.064Review
TkA07G241780LXL04_028860JCVI_TKOH_0030799.8100.0 / 100.0Strict
TkA07G242740LXL04_028863JCVI_TKOH_0030799.3100.0 / 96.923Strict
TkA07G243170LXL04_028864JCVI_TKOH_0030799.1100.0 / 100.0Complex
TkA07G243230LXL04_028866JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G243270LXL04_028867JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G243950LXL04_028886JCVI_TKOH_0030782.8100.0 / 100.0Review
TkA07G244570LXL04_028888JCVI_TKOH_0030794.273.394 / 100.0Probable
TkA07G245650LXL04_028893JCVI_TKOH_0030798.8100.0 / 100.0Strict
TkA07G245660LXL04_028894JCVI_TKOH_0030795.7100.0 / 94.249Strict
TkA07G246830LXL04_028899JCVI_TKOH_0030792.792.083 / 55.107Review
TkA07G247220LXL04_028901JCVI_TKOH_0030799.1100.0 / 100.0Complex
TkA07G248410LXL04_028911JCVI_TKOH_0030797.181.928 / 24.635Complex
TkA07G248540LXL04_028913JCVI_TKOH_0030778.395.482 / 100.0Review
TkA07G248580LXL04_028916JCVI_TKOH_0030790.6100.0 / 99.515Complex
TkA07G249060LXL04_028916JCVI_TKOH_0030798.1100.0 / 100.0Complex
TkA07G249580LXL04_028920JCVI_TKOH_0030797.4100.0 / 100.0Strict
TkA07G249900LXL04_028922JCVI_TKOH_0030796.1100.0 / 100.0Review
TkA07G250070LXL04_028923JCVI_TKOH_00307100.0100.0 / 81.102Complex
TkA07G250430LXL04_028924JCVI_TKOH_0030799.7100.0 / 100.0Complex
TkA07G250500LXL04_028925JCVI_TKOH_0030797.498.498 / 54.773Review
TkA07G250670LXL04_028922JCVI_TKOH_0030796.1100.0 / 100.0Review
TkA07G250890LXL04_028924JCVI_TKOH_0030799.6100.0 / 89.643Complex
TkA07G250980LXL04_028925JCVI_TKOH_0030794.799.875 / 97.494Complex
TkA07G250990LXL04_028926JCVI_TKOH_0030797.391.667 / 63.415Complex
TkA07G251240LXL04_028930JCVI_TKOH_0030799.1100.0 / 100.0Strict
TkA07G251360LXL04_028931JCVI_TKOH_0030799.7100.0 / 100.0Complex
TkA07G251860LXL04_028932JCVI_TKOH_0030789.6100.0 / 100.0Complex
TkA07G252000LXL04_028935JCVI_TKOH_0030799.7100.0 / 100.0Strict
TkA07G252090LXL04_028937JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G252100LXL04_028938JCVI_TKOH_0030796.1100.0 / 100.0Strict
TkA07G252210LXL04_028938JCVI_TKOH_0030769.449.2 / 10.798Complex
TkA07G252220LXL04_028939JCVI_TKOH_0030797.597.536 / 100.0Strict
TkA07G252590LXL04_028940JCVI_TKOH_0030793.7100.0 / 68.251Review
TkA07G252600LXL04_028940JCVI_TKOH_0030794.0100.0 / 21.598Complex
TkA07G252610LXL04_028938JCVI_TKOH_0030764.860.591 / 10.073Complex
TkA07G252650LXL04_028941JCVI_TKOH_0030799.1100.0 / 29.189Review
TkA07G252660LXL04_028943JCVI_TKOH_00307100.095.266 / 90.96Strict
TkA07G253240LXL04_028945JCVI_TKOH_0030799.5100.0 / 100.0Strict
TkA07G253550LXL04_028947JCVI_TKOH_0030769.0100.0 / 83.591Review
TkA07G253640LXL04_028948JCVI_TKOH_0030783.2100.0 / 100.0Review
TkA07G253910LXL04_028949JCVI_TKOH_00307100.0100.0 / 62.857Review
TkA07G254370LXL04_028953JCVI_TKOH_0030798.499.794 / 94.175Strict
TkA07G254860LXL04_028958JCVI_TKOH_00307100.093.615 / 92.229Strict
TkA07G255300LXL04_028966JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G255420LXL04_028967JCVI_TKOH_0030799.7100.0 / 100.0Strict
TkA07G255440LXL04_028968JCVI_TKOH_0030799.899.089 / 66.718Review
TkA07G255520LXL04_028970JCVI_TKOH_0030799.6100.0 / 100.0Strict
TkA07G255530LXL04_028971JCVI_TKOH_0030799.9100.0 / 100.0Strict
TkA07G255820LXL04_028974JCVI_TKOH_00307100.0100.0 / 100.0Review
TkA07G257520LXL04_028979JCVI_TKOH_0030798.177.037 / 96.296Complex
TkA07G257760LXL04_028980JCVI_TKOH_0030752.032.258 / 14.286Complex
TkA07G257970LXL04_028982JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G258000LXL04_028984JCVI_TKOH_0030799.191.34 / 27.932Review
TkA07G258820LXL04_028985JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G258990LXL04_028987JCVI_TKOH_0030790.686.29 / 92.857Probable
TkA07G259280LXL04_028989JCVI_TKOH_0030793.899.299 / 90.763Probable
TkA07G259320LXL04_028990JCVI_TKOH_00307100.098.364 / 78.253Probable
TkA07G259400LXL04_028991JCVI_TKOH_0030795.4100.0 / 100.0Strict
TkA07G259580LXL04_028993JCVI_TKOH_0030799.4100.0 / 92.188Strict
TkA07G259640LXL04_028996JCVI_TKOH_0030788.1100.0 / 41.501Review
TkA07G259650LXL04_028996JCVI_TKOH_0030799.086.325 / 14.306Review
TkA07G259680LXL04_028998JCVI_TKOH_0030795.3100.0 / 100.0Complex
TkA07G259900LXL04_028998JCVI_TKOH_0030763.799.668 / 90.6Complex
TkA07G260330LXL04_028999JCVI_TKOH_0030790.0100.0 / 96.468Complex
TkA07G260370LXL04_029001JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G260840LXL04_029002JCVI_TKOH_00307100.0100.0 / 95.133Strict
TkA07G260850LXL04_029003JCVI_TKOH_0030798.8100.0 / 100.0Strict
TkA07G260880LXL04_029004JCVI_TKOH_0030792.488.71 / 81.361Probable
TkA07G260900LXL04_029005JCVI_TKOH_0030798.3100.0 / 95.504Strict
TkA07G260910LXL04_029006JCVI_TKOH_0030792.387.895 / 49.412Review
TkA07G261200LXL04_029009JCVI_TKOH_0030799.597.5 / 67.241Review
TkA07G261350LXL04_029018JCVI_TKOH_0030795.595.067 / 67.769Review
TkA07G262450LXL04_029026JCVI_TKOH_00307100.0100.0 / 18.713Review
TkA07G262460LXL04_029026JCVI_TKOH_0030797.299.527 / 75.556Probable
TkA07G263200LXL04_029027JCVI_TKOH_0030798.8100.0 / 100.0Strict
TkA07G263300LXL04_029028JCVI_TKOH_0030796.694.421 / 100.0Strict
TkA07G264100LXL04_029036JCVI_TKOH_0030771.176.667 / 73.761Complex
TkA07G264420LXL04_029036JCVI_TKOH_0030797.1100.0 / 100.0Complex
TkA07G264950LXL04_029042JCVI_TKOH_0030777.797.118 / 76.438Complex
TkA07G265050LXL04_029042JCVI_TKOH_0030799.798.746 / 86.301Complex
TkA07G265250LXL04_029043JCVI_TKOH_00307100.0100.0 / 74.126Complex
TkA07G265500LXL04_029045JCVI_TKOH_0030791.3100.0 / 100.0Complex
TkA07G265520LXL04_029046JCVI_TKOH_0030794.2100.0 / 80.071Review
TkA07G266290LXL04_029047JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G266310LXL04_029048JCVI_TKOH_0030799.4100.0 / 100.0Strict
TkA07G266330LXL04_029049JCVI_TKOH_0030799.962.5 / 62.5Complex
TkA07G266370LXL04_029051JCVI_TKOH_0030799.6100.0 / 100.0Strict
TkA07G266450LXL04_029052JCVI_TKOH_0030798.1100.0 / 100.0Strict
TkA07G267120LXL04_029057JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G267200LXL04_029058JCVI_TKOH_0030798.095.0 / 34.983Review
TkA07G267790LXL04_029060JCVI_TKOH_0030799.8100.0 / 100.0Complex
TkA07G268070LXL04_029061JCVI_TKOH_0030795.9100.0 / 85.468Strict
TkA07G268780LXL04_029062JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G268890LXL04_029063JCVI_TKOH_0030799.3100.0 / 67.568Review
TkA07G268970LXL04_029064JCVI_TKOH_0030799.289.818 / 45.238Review
TkA07G269310LXL04_029066JCVI_TKOH_0030788.7100.0 / 100.0Review
TkA07G269460LXL04_029068JCVI_TKOH_0030796.038.757 / 72.149Review
TkA07G269510LXL04_029070JCVI_TKOH_0030783.8100.0 / 100.0Review
TkA07G269750LXL04_029071JCVI_TKOH_0030798.9100.0 / 100.0Strict
TkA07G269770LXL04_029072JCVI_TKOH_0030791.2100.0 / 94.118Probable
TkA07G269960LXL04_029075JCVI_TKOH_0030798.8100.0 / 100.0Strict
TkA07G270330LXL04_029076JCVI_TKOH_0030799.299.945 / 93.882Strict
TkA07G270420LXL04_029076JCVI_TKOH_0030796.883.929 / 4.833Complex
TkA07G270480LXL04_029082JCVI_TKOH_0030792.9100.0 / 100.0Probable
TkA07G270840LXL04_029090JCVI_TKOH_0030795.799.857 / 41.453Review
TkA07G271360LXL04_029090JCVI_TKOH_0030779.499.901 / 63.023Review
TkA07G271380LXL04_029090JCVI_TKOH_0030795.999.855 / 40.0Review
TkA07G271570LXL04_029093JCVI_TKOH_00307100.099.134 / 91.968Strict
TkA07G271800LXL04_029094JCVI_TKOH_0030768.5100.0 / 100.0Complex
TkA07G272110LXL04_029095JCVI_TKOH_0030795.9100.0 / 100.0Complex
TkA07G272170LXL04_029096JCVI_TKOH_0030799.692.793 / 55.436Review
TkA07G272180LXL04_029099JCVI_TKOH_0030799.2100.0 / 100.0Complex
TkA07G272190LXL04_029100JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G272200LXL04_029101JCVI_TKOH_0030799.2100.0 / 100.0Strict
TkA07G272240LXL04_029102JCVI_TKOH_0030792.4100.0 / 100.0Probable
TkA07G272480LXL04_029104JCVI_TKOH_0030797.3100.0 / 88.29Complex
TkA07G272530LXL04_029106JCVI_TKOH_00307100.064.744 / 75.94Review
TkA07G272540LXL04_029107JCVI_TKOH_0030775.891.213 / 94.783Review
TkA07G272840LXL04_029111JCVI_TKOH_00307100.099.351 / 63.223Complex
TkA07G272850LXL04_029112JCVI_TKOH_0030797.094.476 / 98.097Strict
TkA07G272890LXL04_029115JCVI_TKOH_0030797.699.436 / 100.0Complex
TkA07G272900LXL04_029117JCVI_TKOH_0030796.1100.0 / 70.882Complex
TkA07G273960LXL04_029115JCVI_TKOH_0030798.5100.0 / 100.0Complex
TkA07G273970LXL04_029117JCVI_TKOH_0030796.9100.0 / 81.765Complex
TkA07G275150LXL04_029126JCVI_TKOH_0030795.1100.0 / 100.0Strict
TkA07G275160LXL04_029127JCVI_TKOH_00307100.099.451 / 72.984Probable
TkA07G275280LXL04_029128JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G275970LXL04_029132JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G275980LXL04_029133JCVI_TKOH_0030799.4100.0 / 100.0Complex
TkA07G275990LXL04_029134JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G276060LXL04_029136JCVI_TKOH_0030797.8100.0 / 100.0Complex
TkA07G278030LXL04_029131JCVI_TKOH_0030798.0100.0 / 97.115Review
TkA07G278060LXL04_029132JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G278070LXL04_029133JCVI_TKOH_00307100.0100.0 / 100.0Complex
TkA07G278080LXL04_029134JCVI_TKOH_0030799.7100.0 / 100.0Complex
TkA07G278470LXL04_029136JCVI_TKOH_0030799.8100.0 / 100.0Complex
TkA07G278860LXL04_029137JCVI_TKOH_00307100.0100.0 / 100.0Review
TkA07G278910LXL04_029139JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G278940LXL04_029140JCVI_TKOH_00307100.087.108 / 87.108Strict
TkA07G279000LXL04_029141JCVI_TKOH_00307100.083.797 / 46.229Review
TkA07G279210LXL04_029142JCVI_TKOH_0030799.8100.0 / 100.0Strict
TkA07G279220LXL04_029143JCVI_TKOH_0030781.5100.0 / 42.797Complex
TkA07G279310LXL04_029146JCVI_TKOH_0030799.3100.0 / 13.919Review
TkA07G279330LXL04_029145JCVI_TKOH_0030777.5100.0 / 52.504Complex
TkA07G279340LXL04_029143JCVI_TKOH_0030793.484.868 / 36.441Complex
TkA07G279600LXL04_029146JCVI_TKOH_0030799.5100.0 / 97.894Strict
TkA07G280020LXL04_029149JCVI_TKOH_0030794.498.165 / 38.674Complex
TkA07G280030LXL04_029150JCVI_TKOH_0030788.7100.0 / 100.0Complex
TkA07G280110LXL04_029152JCVI_TKOH_0030795.4100.0 / 99.758Complex
TkA07G280370LXL04_029149JCVI_TKOH_0030799.8100.0 / 87.293Strict
TkA07G280380LXL04_029150JCVI_TKOH_0030789.3100.0 / 100.0Complex
TkA07G280420LXL04_029152JCVI_TKOH_0030786.7100.0 / 100.0Complex
TkA07G280470LXL04_029157JCVI_TKOH_0030796.187.356 / 77.949Probable
TkA07G280910LXL04_029161JCVI_TKOH_0030795.298.045 / 100.0Complex
TkA07G280990LXL04_029160JCVI_TKOH_0030795.889.77 / 75.571Review
TkA07G281040LXL04_029163JCVI_TKOH_0030798.645.399 / 34.906Review
TkA07G281290LXL04_029165JCVI_TKOH_0030794.7100.0 / 87.346Complex
TkA07G281300LXL04_029167JCVI_TKOH_00307100.0100.0 / 87.805Complex
TkA07G281390LXL04_029168JCVI_TKOH_00307100.0100.0 / 100.0Strict
TkA07G281950LXL04_029171JCVI_TKOH_0030793.698.526 / 95.22Complex
TkA07G282260LXL04_029172JCVI_TKOH_00307100.028.037 / 16.667Complex
TkA07G282330LXL04_029174JCVI_TKOH_0030782.893.723 / 84.513Complex
TkA07G282390LXL04_029176JCVI_TKOH_0030788.898.498 / 68.553Complex
TkA07G282520LXL04_029176JCVI_TKOH_0030787.394.375 / 68.082Complex
TkA07G282530LXL04_029177JCVI_TKOH_0030798.1100.0 / 97.185Strict
TkA07G282540LXL04_029178JCVI_TKOH_0030797.798.972 / 100.0Strict
TkA07G282820LXL04_029180JCVI_TKOH_0030799.499.041 / 72.798Probable
TkA07G282850LXL04_029181JCVI_TKOH_0030794.598.37 / 46.41Complex
TkA07G283020LXL04_029154JCVI_TKOH_0030792.397.81 / 97.704Complex
TkA07G284140LXL04_029201JCVI_TKOH_0030777.499.762 / 25.21Complex
TkA07G284300LXL04_029196JCVI_TKOH_0030787.698.033 / 98.857Review
TkA07G284630LXL04_029204JCVI_TKOH_0030797.499.471 / 55.848Review
TkA07G284640LXL04_029205JCVI_TKOH_0030791.4100.0 / 70.698Complex
TkA07G284760LXL04_029207JCVI_TKOH_0030799.9100.0 / 100.0Complex
TkA07G284810LXL04_029208JCVI_TKOH_0030787.1100.0 / 100.0Complex
TkA07G284860LXL04_029209JCVI_TKOH_0030792.594.664 / 23.482Review
TkA07G284880LXL04_029210JCVI_TKOH_0030798.699.409 / 95.907Complex
TkA07G285140LXL04_029217JCVI_TKOH_0030760.294.91 / 16.64Complex
TkA07G285220LXL04_029217JCVI_TKOH_0030777.696.635 / 10.599Complex
TkA07G285260LXL04_029214JCVI_TKOH_0030791.5100.0 / 100.0Probable
TkA07G285520LXL04_029217JCVI_TKOH_0030793.699.806 / 54.637Review
TkA07G286160LXL04_029217JCVI_TKOH_0030781.399.08 / 17.276Complex
TkA07G286270LXL04_029217JCVI_TKOH_0030773.587.611 / 5.988Complex
TkA07G286280LXL04_029217JCVI_TKOH_0030796.799.711 / 36.566Review
TkA07G286500LXL04_029218JCVI_TKOH_00307100.095.03 / 95.03Complex
TkA07G286540LXL04_029219JCVI_TKOH_0030799.899.512 / 100.0Strict