Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00314
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 376
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00314

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00314 Chr07 101257191-112970028 Chr06 115965610-126693932 mixed High 200 anchors
Chr07 101257191-112970028 Chr06 115965610-126693932 JCVI_TKOH_00314 · 376 gene pairs TkA07G402930 | LXL04_030433 | 100.0% | multi_source_to_OH1004 | Complex TkA07G402940 | LXL04_030434 | 95.9% | RBH_high_identity_coverage_synteny | Strict TkA07G403010 | LXL04_030436 | 93.2% | multi_source_to_OH1004 | Complex TkA07G403050 | LXL04_030438 | 89.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G403060 | LXL04_030439 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G403200 | LXL04_030440 | 100.0% | multi_source_to_OH1004 | Complex TkA07G403380 | LXL04_030443 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G403410 | LXL04_030444 | 70.9% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G403550 | LXL04_030445 | 74.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G404150 | LXL04_030452 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G404260 | LXL04_030454 | 100.0% | non_reciprocal_best_hit | Complex TkA07G404790 | LXL04_030457 | 96.2% | RBH_high_identity_coverage_synteny | Strict
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00314 Chr07:101257191-112970028 Chr06:115965610-126693932 mixed 376 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 376 · Showing 1–200 · Page 1/2

TkA07G402930 → LXL04_030433
100.0%
TkA07G402940 → LXL04_030434
95.9%
TkA07G403010 → LXL04_030436
93.2%
TkA07G403050 → LXL04_030438
89.0%
TkA07G403060 → LXL04_030439
100.0%
TkA07G403200 → LXL04_030440
100.0%
TkA07G403380 → LXL04_030443
100.0%
TkA07G403410 → LXL04_030444
70.9%
TkA07G403550 → LXL04_030445
74.7%
TkA07G404150 → LXL04_030452
100.0%
TkA07G404260 → LXL04_030454
100.0%
TkA07G404790 → LXL04_030457
96.2%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA07G402930LXL04_030433JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G402940LXL04_030434JCVI_TKOH_0031495.9100.0 / 100.0Strict
TkA07G403010LXL04_030436JCVI_TKOH_0031493.2100.0 / 100.0Complex
TkA07G403050LXL04_030438JCVI_TKOH_0031489.099.764 / 99.775Review
TkA07G403060LXL04_030439JCVI_TKOH_00314100.087.912 / 92.486Strict
TkA07G403200LXL04_030440JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G403380LXL04_030443JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G403410LXL04_030444JCVI_TKOH_0031470.992.544 / 96.8Review
TkA07G403550LXL04_030445JCVI_TKOH_0031474.795.604 / 85.065Review
TkA07G404150LXL04_030452JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G404260LXL04_030454JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G404790LXL04_030457JCVI_TKOH_0031496.2100.0 / 99.25Strict
TkA07G404910LXL04_030459JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G404980LXL04_030463JCVI_TKOH_0031499.0100.0 / 100.0Strict
TkA07G404990LXL04_030465JCVI_TKOH_0031499.7100.0 / 100.0Strict
TkA07G405040LXL04_030467JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G405180LXL04_030468JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G405190LXL04_030469JCVI_TKOH_0031498.2100.0 / 100.0Complex
TkA07G405220LXL04_030470JCVI_TKOH_0031497.698.526 / 85.623Strict
TkA07G405890LXL04_030474JCVI_TKOH_0031498.6100.0 / 100.0Strict
TkA07G406200LXL04_030476JCVI_TKOH_0031498.1100.0 / 100.0Complex
TkA07G406210LXL04_030477JCVI_TKOH_0031495.089.103 / 52.453Review
TkA07G406280LXL04_030478JCVI_TKOH_0031492.697.211 / 87.143Probable
TkA07G406700LXL04_030481JCVI_TKOH_0031475.3100.0 / 100.0Review
TkA07G406710LXL04_030482JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G406810LXL04_030484JCVI_TKOH_0031494.9100.0 / 94.891Probable
TkA07G407020LXL04_030487JCVI_TKOH_0031494.597.023 / 93.813Probable
TkA07G407030LXL04_030488JCVI_TKOH_0031499.8100.0 / 100.0Strict
TkA07G407200LXL04_030489JCVI_TKOH_0031495.0100.0 / 88.476Strict
TkA07G407320LXL04_030490JCVI_TKOH_0031494.7100.0 / 100.0Probable
TkA07G407350LXL04_030491JCVI_TKOH_00314100.099.375 / 71.622Probable
TkA07G407370LXL04_030492JCVI_TKOH_0031496.193.41 / 76.256Probable
TkA07G407380LXL04_030493JCVI_TKOH_00314100.0100.0 / 57.233Review
TkA07G407660LXL04_030494JCVI_TKOH_0031474.393.75 / 14.818Complex
TkA07G407850LXL04_030495JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G408110LXL04_030497JCVI_TKOH_0031499.898.858 / 93.926Strict
TkA07G408380LXL04_030498JCVI_TKOH_0031499.899.571 / 96.266Strict
TkA07G408390LXL04_030499JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G408450LXL04_030500JCVI_TKOH_0031499.4100.0 / 90.789Complex
TkA07G408460LXL04_030501JCVI_TKOH_00314100.0100.0 / 45.888Review
TkA07G408480LXL04_030502JCVI_TKOH_00314100.094.949 / 32.982Review
TkA07G408570LXL04_030503JCVI_TKOH_0031480.099.522 / 97.357Review
TkA07G408620LXL04_030504JCVI_TKOH_00314100.0100.0 / 82.555Strict
TkA07G408640LXL04_030505JCVI_TKOH_00314100.090.361 / 100.0Strict
TkA07G409210LXL04_030519JCVI_TKOH_0031497.4100.0 / 100.0Complex
TkA07G409300LXL04_030520JCVI_TKOH_0031481.4100.0 / 100.0Complex
TkA07G409500LXL04_030521JCVI_TKOH_0031497.8100.0 / 100.0Complex
TkA07G409650LXL04_030522JCVI_TKOH_0031499.899.275 / 99.757Complex
TkA07G409670LXL04_030523JCVI_TKOH_0031494.3100.0 / 100.0Probable
TkA07G409760LXL04_030526JCVI_TKOH_0031492.3100.0 / 91.818Probable
TkA07G409770LXL04_030527JCVI_TKOH_0031485.267.5 / 75.0Review
TkA07G409860LXL04_030528JCVI_TKOH_0031497.198.131 / 93.994Strict
TkA07G409890LXL04_030529JCVI_TKOH_0031499.2100.0 / 100.0Strict
TkA07G409950LXL04_030530JCVI_TKOH_0031499.5100.0 / 100.0Strict
TkA07G409980LXL04_030531JCVI_TKOH_00314100.0100.0 / 100.0Review
TkA07G410020LXL04_030532JCVI_TKOH_00314100.099.853 / 76.437Probable
TkA07G410040LXL04_030534JCVI_TKOH_0031499.698.582 / 100.0Complex
TkA07G410060LXL04_030535JCVI_TKOH_0031499.8100.0 / 100.0Strict
TkA07G410380LXL04_030537JCVI_TKOH_0031499.4100.0 / 100.0Complex
TkA07G410500LXL04_030539JCVI_TKOH_0031488.758.491 / 39.241Complex
TkA07G410520LXL04_030544JCVI_TKOH_0031498.998.67 / 58.61Review
TkA07G410530LXL04_030545JCVI_TKOH_0031497.598.654 / 74.456Probable
TkA07G410540LXL04_030546JCVI_TKOH_0031498.3100.0 / 100.0Strict
TkA07G410550LXL04_030547JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G410560LXL04_030548JCVI_TKOH_0031494.6100.0 / 100.0Review
TkA07G410570LXL04_030549JCVI_TKOH_0031499.6100.0 / 100.0Strict
TkA07G410800LXL04_030550JCVI_TKOH_00314100.0100.0 / 48.162Review
TkA07G410810LXL04_030551JCVI_TKOH_0031499.4100.0 / 100.0Strict
TkA07G410820LXL04_030552JCVI_TKOH_00314100.096.277 / 35.467Review
TkA07G410830LXL04_030555JCVI_TKOH_0031497.799.304 / 96.264Complex
TkA07G410910LXL04_030558JCVI_TKOH_0031490.899.835 / 51.733Complex
TkA07G411080LXL04_030561JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G411140LXL04_030562JCVI_TKOH_0031498.7100.0 / 73.544Probable
TkA07G411640LXL04_030565JCVI_TKOH_0031497.2100.0 / 100.0Review
TkA07G411650LXL04_030566JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G411660LXL04_030567JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G411690LXL04_030568JCVI_TKOH_0031499.7100.0 / 100.0Strict
TkA07G411720LXL04_030569JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G411850LXL04_030570JCVI_TKOH_00314100.089.873 / 100.0Review
TkA07G411910LXL04_030571JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G411920LXL04_030572JCVI_TKOH_0031493.399.265 / 25.862Complex
TkA07G411940LXL04_030573JCVI_TKOH_0031499.6100.0 / 100.0Complex
TkA07G412030LXL04_030575JCVI_TKOH_0031499.6100.0 / 100.0Complex
TkA07G413430LXL04_030580JCVI_TKOH_0031495.9100.0 / 100.0Strict
TkA07G413440LXL04_030581JCVI_TKOH_0031493.8100.0 / 100.0Probable
TkA07G413460LXL04_030582JCVI_TKOH_0031499.1100.0 / 100.0Strict
TkA07G413630LXL04_030583JCVI_TKOH_0031499.7100.0 / 68.92Review
TkA07G413650LXL04_030584JCVI_TKOH_0031497.1100.0 / 74.795Probable
TkA07G413700LXL04_030585JCVI_TKOH_0031498.699.804 / 98.646Strict
TkA07G413730LXL04_030586JCVI_TKOH_0031499.585.714 / 100.0Strict
TkA07G413890LXL04_030588JCVI_TKOH_0031499.6100.0 / 88.085Complex
TkA07G413900LXL04_030589JCVI_TKOH_0031498.4100.0 / 100.0Complex
TkA07G413920LXL04_030590JCVI_TKOH_0031499.6100.0 / 100.0Complex
TkA07G413950LXL04_030591JCVI_TKOH_0031499.6100.0 / 100.0Complex
TkA07G414150LXL04_030592JCVI_TKOH_0031495.7100.0 / 100.0Review
TkA07G414160LXL04_030593JCVI_TKOH_0031498.6100.0 / 100.0Review
TkA07G414170LXL04_030594JCVI_TKOH_0031499.6100.0 / 100.0Complex
TkA07G414180LXL04_030595JCVI_TKOH_0031499.491.713 / 100.0Complex
TkA07G414190LXL04_030596JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G414220LXL04_030598JCVI_TKOH_0031484.999.682 / 65.125Complex
TkA07G414310LXL04_030601JCVI_TKOH_0031498.9100.0 / 100.0Complex
TkA07G414330LXL04_030603JCVI_TKOH_0031499.6100.0 / 75.989Probable
TkA07G414410LXL04_030604JCVI_TKOH_0031480.0100.0 / 100.0Review
TkA07G414520LXL04_030605JCVI_TKOH_00314100.0100.0 / 100.0Review
TkA07G414560LXL04_030606JCVI_TKOH_0031493.8100.0 / 97.797Complex
TkA07G414580LXL04_030607JCVI_TKOH_00314100.0100.0 / 100.0Review
TkA07G414590LXL04_030608JCVI_TKOH_00314100.0100.0 / 100.0Review
TkA07G414600LXL04_030609JCVI_TKOH_0031490.4100.0 / 100.0Complex
TkA07G414670LXL04_030611JCVI_TKOH_00314100.0100.0 / 14.305Review
TkA07G414680LXL04_030611JCVI_TKOH_0031499.798.167 / 58.78Review
TkA07G415240LXL04_030609JCVI_TKOH_0031489.4100.0 / 100.0Complex
TkA07G415260LXL04_030611JCVI_TKOH_0031498.4100.0 / 14.351Review
TkA07G415270LXL04_030611JCVI_TKOH_0031496.797.674 / 50.252Review
TkA07G415290LXL04_030612JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G415350LXL04_030613JCVI_TKOH_0031495.4100.0 / 79.853Complex
TkA07G415370LXL04_030614JCVI_TKOH_0031470.5100.0 / 97.843Review
TkA07G415400LXL04_030615JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G415410LXL04_030616JCVI_TKOH_00314100.083.333 / 98.739Strict
TkA07G415530LXL04_030619JCVI_TKOH_0031499.7100.0 / 100.0Strict
TkA07G419130LXL04_030622JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G419240LXL04_030627JCVI_TKOH_0031492.195.0 / 60.699Complex
TkA07G419830LXL04_030628JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G419850LXL04_030629JCVI_TKOH_0031490.394.505 / 50.535Review
TkA07G419870LXL04_030630JCVI_TKOH_0031499.7100.0 / 100.0Strict
TkA07G419880LXL04_030632JCVI_TKOH_00314100.092.063 / 67.704Review
TkA07G419940LXL04_030633JCVI_TKOH_0031496.1100.0 / 100.0Complex
TkA07G420160LXL04_030637JCVI_TKOH_0031499.3100.0 / 100.0Strict
TkA07G420380LXL04_030639JCVI_TKOH_0031487.3100.0 / 71.549Complex
TkA07G420400LXL04_030639JCVI_TKOH_0031496.454.369 / 28.283Complex
TkA07G420430LXL04_030639JCVI_TKOH_0031454.299.644 / 61.953Complex
TkA07G420950LXL04_030643JCVI_TKOH_0031480.788.701 / 45.926Complex
TkA07G420980LXL04_030644JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G420990LXL04_030645JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G421010LXL04_030646JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G421120LXL04_030647JCVI_TKOH_0031494.3100.0 / 79.837Probable
TkA07G421130LXL04_030648JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G421270LXL04_030649JCVI_TKOH_0031495.6100.0 / 100.0Strict
TkA07G421310LXL04_030650JCVI_TKOH_00314100.090.948 / 27.69Review
TkA07G421320LXL04_030650JCVI_TKOH_00314100.088.636 / 20.472Review
TkA07G421550LXL04_030651JCVI_TKOH_00314100.0100.0 / 55.208Review
TkA07G421640LXL04_030653JCVI_TKOH_0031492.0100.0 / 100.0Probable
TkA07G421660LXL04_030654JCVI_TKOH_0031499.4100.0 / 100.0Strict
TkA07G421680LXL04_030655JCVI_TKOH_0031495.7100.0 / 100.0Strict
TkA07G421760LXL04_030657JCVI_TKOH_0031499.7100.0 / 44.272Review
TkA07G421770LXL04_030657JCVI_TKOH_0031491.198.947 / 43.653Complex
TkA07G421820LXL04_030659JCVI_TKOH_0031476.0100.0 / 100.0Complex
TkA07G421830LXL04_030660JCVI_TKOH_00314100.0100.0 / 91.317Review
TkA07G422480LXL04_030665JCVI_TKOH_0031499.7100.0 / 100.0Strict
TkA07G422500LXL04_030668JCVI_TKOH_0031498.5100.0 / 91.53Strict
TkA07G422510LXL04_030669JCVI_TKOH_0031499.5100.0 / 100.0Strict
TkA07G422550LXL04_030670JCVI_TKOH_0031498.5100.0 / 86.126Strict
TkA07G422560LXL04_030671JCVI_TKOH_0031499.596.627 / 74.122Probable
TkA07G422570LXL04_030672JCVI_TKOH_0031497.8100.0 / 100.0Strict
TkA07G422630LXL04_030673JCVI_TKOH_0031499.7100.0 / 100.0Strict
TkA07G422640LXL04_030674JCVI_TKOH_0031499.0100.0 / 100.0Strict
TkA07G422650LXL04_030675JCVI_TKOH_0031499.6100.0 / 100.0Strict
TkA07G422660LXL04_030676JCVI_TKOH_00314100.0100.0 / 100.0Review
TkA07G422670LXL04_030677JCVI_TKOH_0031499.8100.0 / 100.0Strict
TkA07G422710LXL04_030678JCVI_TKOH_0031497.8100.0 / 100.0Strict
TkA07G422720LXL04_030679JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G422930LXL04_030682JCVI_TKOH_0031499.8100.0 / 100.0Strict
TkA07G423150LXL04_030684JCVI_TKOH_0031499.3100.0 / 45.133Review
TkA07G423200LXL04_030685JCVI_TKOH_0031499.697.213 / 85.321Strict
TkA07G423210LXL04_030686JCVI_TKOH_0031496.7100.0 / 92.11Strict
TkA07G423320LXL04_030687JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G423340LXL04_030688JCVI_TKOH_0031497.496.438 / 99.717Strict
TkA07G423430LXL04_030689JCVI_TKOH_0031499.194.444 / 52.494Review
TkA07G423600LXL04_030695JCVI_TKOH_0031497.097.059 / 88.472Strict
TkA07G423700LXL04_030696JCVI_TKOH_0031492.6100.0 / 100.0Probable
TkA07G423770LXL04_030697JCVI_TKOH_0031499.0100.0 / 27.209Review
TkA07G423780LXL04_030697JCVI_TKOH_0031447.5100.0 / 61.15Complex
TkA07G423790LXL04_030698JCVI_TKOH_00314100.0100.0 / 30.038Review
TkA07G423800LXL04_030698JCVI_TKOH_0031499.6100.0 / 50.38Review
TkA07G424060LXL04_030700JCVI_TKOH_0031495.3100.0 / 100.0Strict
TkA07G424090LXL04_030701JCVI_TKOH_0031499.192.742 / 31.856Review
TkA07G424740LXL04_030705JCVI_TKOH_0031499.6100.0 / 100.0Strict
TkA07G424770LXL04_030706JCVI_TKOH_0031498.796.682 / 93.578Strict
TkA07G424990LXL04_030709JCVI_TKOH_00314100.0100.0 / 100.0Complex
TkA07G425000LXL04_030709JCVI_TKOH_0031464.287.945 / 88.556Complex
TkA07G425220LXL04_030710JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G425240LXL04_030711JCVI_TKOH_0031498.698.639 / 71.429Complex
TkA07G425350LXL04_030712JCVI_TKOH_0031491.697.509 / 93.333Probable
TkA07G425430LXL04_030713JCVI_TKOH_0031499.8100.0 / 100.0Strict
TkA07G425500LXL04_030714JCVI_TKOH_0031495.4100.0 / 100.0Strict
TkA07G425700LXL04_030716JCVI_TKOH_0031499.2100.0 / 100.0Strict
TkA07G425850LXL04_030717JCVI_TKOH_0031495.896.899 / 100.0Strict
TkA07G425890LXL04_030718JCVI_TKOH_0031498.4100.0 / 93.0Strict
TkA07G425900LXL04_030719JCVI_TKOH_0031499.0100.0 / 97.556Strict
TkA07G425970LXL04_030721JCVI_TKOH_0031499.9100.0 / 100.0Complex
TkA07G426000LXL04_030723JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G426020LXL04_030725JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G426290LXL04_030727JCVI_TKOH_0031499.398.929 / 89.355Strict
TkA07G426320LXL04_030728JCVI_TKOH_00314100.0100.0 / 100.0Strict
TkA07G426330LXL04_030729JCVI_TKOH_0031491.797.971 / 33.934Complex
TkA07G426340LXL04_030729JCVI_TKOH_0031498.0100.0 / 46.66Review
TkA07G426550LXL04_030730JCVI_TKOH_0031499.799.01 / 90.909Strict
TkA07G426660LXL04_030732JCVI_TKOH_00314100.091.626 / 39.076Review
TkA07G426920LXL04_030734JCVI_TKOH_0031499.159.474 / 24.094Complex
TkA07G427130LXL04_030736JCVI_TKOH_0031499.9100.0 / 100.0Review
TkA07G427180LXL04_030739JCVI_TKOH_0031498.3100.0 / 98.282Strict