Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00346
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 781
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00346

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00346 Chr08 22809577-40062385 Chr07 856277-17709506 mixed High 200 anchors
Chr08 22809577-40062385 Chr07 856277-17709506 JCVI_TKOH_00346 · 781 gene pairs TkA08G120200 | LXL04_031653 | 93.2% | multi_source_to_OH1004 | Complex TkA08G120220 | LXL04_031654 | 78.0% | non_reciprocal_best_hit | Complex TkA08G120510 | LXL04_031655 | 62.4% | multi_source_to_OH1004 | Complex TkA08G120550 | LXL04_031655 | 84.6% | multi_source_to_OH1004 | Complex TkA08G120630 | LXL04_031656 | 99.5% | sequence_supported_annotation_or_model_conflict | Review TkA08G121040 | LXL04_031660 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA08G121050 | LXL04_031661 | 94.8% | RBH_sequence_supported | Probable TkA08G121110 | LXL04_031662 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA08G121170 | LXL04_031664 | 97.7% | non_reciprocal_best_hit | Complex TkA08G121300 | LXL04_031665 | 97.3% | sequence_supported_annotation_or_model_conflict | Review TkA08G121330 | LXL04_031667 | 87.3% | multi_source_to_OH1004 | Complex TkA08G121350 | LXL04_031668 | 93.5% | RBH_sequence_supported | Probable
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00346 Chr08:22809577-40062385 Chr07:856277-17709506 mixed 781 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 781 · Showing 401–600 · Page 3/4

TkA08G120200 → LXL04_031653
93.2%
TkA08G120220 → LXL04_031654
78.0%
TkA08G120510 → LXL04_031655
62.4%
TkA08G120550 → LXL04_031655
84.6%
TkA08G120630 → LXL04_031656
99.5%
TkA08G121040 → LXL04_031660
100.0%
TkA08G121050 → LXL04_031661
94.8%
TkA08G121110 → LXL04_031662
100.0%
TkA08G121170 → LXL04_031664
97.7%
TkA08G121300 → LXL04_031665
97.3%
TkA08G121330 → LXL04_031667
87.3%
TkA08G121350 → LXL04_031668
93.5%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA08G120200LXL04_031653JCVI_TKOH_0034693.281.818 / 63.934Complex
TkA08G120220LXL04_031654JCVI_TKOH_0034678.079.13 / 38.397Complex
TkA08G120510LXL04_031655JCVI_TKOH_0034662.499.563 / 99.632Complex
TkA08G120550LXL04_031655JCVI_TKOH_0034684.6100.0 / 100.0Complex
TkA08G120630LXL04_031656JCVI_TKOH_0034699.5100.0 / 100.0Review
TkA08G121040LXL04_031660JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G121050LXL04_031661JCVI_TKOH_0034694.8100.0 / 89.407Probable
TkA08G121110LXL04_031662JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G121170LXL04_031664JCVI_TKOH_0034697.7100.0 / 60.563Complex
TkA08G121300LXL04_031665JCVI_TKOH_0034697.392.308 / 87.129Review
TkA08G121330LXL04_031667JCVI_TKOH_0034687.398.864 / 66.123Complex
TkA08G121350LXL04_031668JCVI_TKOH_0034693.5100.0 / 100.0Probable
TkA08G121360LXL04_031669JCVI_TKOH_00346100.0100.0 / 97.863Strict
TkA08G121390LXL04_031670JCVI_TKOH_0034695.379.545 / 60.732Review
TkA08G121410LXL04_031672JCVI_TKOH_0034699.4100.0 / 100.0Strict
TkA08G121510LXL04_031673JCVI_TKOH_0034699.5100.0 / 100.0Strict
TkA08G121640LXL04_031674JCVI_TKOH_0034698.195.549 / 12.667Review
TkA08G121650LXL04_031675JCVI_TKOH_0034684.999.709 / 99.276Complex
TkA08G121660LXL04_031678JCVI_TKOH_0034699.5100.0 / 77.959Probable
TkA08G121770LXL04_031680JCVI_TKOH_00346100.081.102 / 54.787Complex
TkA08G122010LXL04_031684JCVI_TKOH_0034687.299.231 / 12.68Complex
TkA08G122030LXL04_031685JCVI_TKOH_0034697.752.41 / 33.984Complex
TkA08G122150LXL04_031687JCVI_TKOH_0034697.4100.0 / 96.02Complex
TkA08G122160LXL04_031688JCVI_TKOH_0034696.8100.0 / 80.198Strict
TkA08G122280LXL04_031689JCVI_TKOH_0034691.3100.0 / 100.0Probable
TkA08G122290LXL04_031690JCVI_TKOH_0034699.6100.0 / 100.0Strict
TkA08G122360LXL04_031693JCVI_TKOH_0034695.0100.0 / 45.484Review
TkA08G122380LXL04_031694JCVI_TKOH_0034685.6100.0 / 100.0Review
TkA08G122710LXL04_031695JCVI_TKOH_0034698.2100.0 / 95.85Strict
TkA08G122960LXL04_031696JCVI_TKOH_0034697.1100.0 / 91.375Strict
TkA08G123140LXL04_031697JCVI_TKOH_00346100.099.366 / 82.601Complex
TkA08G123490LXL04_031702JCVI_TKOH_0034691.9100.0 / 82.119Complex
TkA08G123570LXL04_031704JCVI_TKOH_00346100.055.34 / 98.276Review
TkA08G124170LXL04_031697JCVI_TKOH_0034692.899.809 / 91.388Complex
TkA08G124290LXL04_031698JCVI_TKOH_0034699.5100.0 / 100.0Strict
TkA08G124330LXL04_031699JCVI_TKOH_0034678.0100.0 / 94.085Review
TkA08G124340LXL04_031700JCVI_TKOH_0034699.5100.0 / 81.471Complex
TkA08G124550LXL04_031702JCVI_TKOH_0034691.9100.0 / 82.119Complex
TkA08G124930LXL04_031706JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G124970LXL04_031707JCVI_TKOH_00346100.0100.0 / 92.373Review
TkA08G125110LXL04_031709JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G125120LXL04_031710JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G125330LXL04_031713JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G125640LXL04_031714JCVI_TKOH_0034699.691.085 / 100.0Strict
TkA08G125650LXL04_031715JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G125730LXL04_031717JCVI_TKOH_0034689.0100.0 / 100.0Review
TkA08G125760LXL04_031718JCVI_TKOH_0034697.0100.0 / 62.733Review
TkA08G125940LXL04_031721JCVI_TKOH_00346100.0100.0 / 58.209Review
TkA08G125960LXL04_031722JCVI_TKOH_0034699.1100.0 / 52.919Review
TkA08G126100LXL04_031723JCVI_TKOH_0034697.2100.0 / 100.0Strict
TkA08G126120LXL04_031724JCVI_TKOH_0034666.974.737 / 75.0Review
TkA08G126210LXL04_031725JCVI_TKOH_0034684.7100.0 / 83.799Complex
TkA08G126460LXL04_031729JCVI_TKOH_0034658.555.357 / 41.558Complex
TkA08G126470LXL04_031730JCVI_TKOH_0034698.889.503 / 31.953Review
TkA08G126510LXL04_031731JCVI_TKOH_0034678.093.514 / 25.441Complex
TkA08G126520LXL04_031731JCVI_TKOH_0034677.872.321 / 11.176Complex
TkA08G126570LXL04_031732JCVI_TKOH_0034691.790.073 / 100.0Complex
TkA08G126680LXL04_031732JCVI_TKOH_0034696.5100.0 / 100.0Complex
TkA08G126760LXL04_031734JCVI_TKOH_0034698.196.505 / 79.601Review
TkA08G126780LXL04_031735JCVI_TKOH_0034693.790.071 / 48.289Review
TkA08G126890LXL04_031736JCVI_TKOH_0034698.077.344 / 28.249Complex
TkA08G126990LXL04_031738JCVI_TKOH_0034693.399.611 / 29.06Review
TkA08G127030LXL04_031738JCVI_TKOH_0034699.894.336 / 26.236Review
TkA08G127060LXL04_031738JCVI_TKOH_0034696.296.667 / 14.177Review
TkA08G127140LXL04_031739JCVI_TKOH_0034685.399.625 / 37.412Complex
TkA08G127150LXL04_031739JCVI_TKOH_0034697.0100.0 / 18.987Review
TkA08G127160LXL04_031740JCVI_TKOH_0034696.993.569 / 58.434Review
TkA08G127180LXL04_031739JCVI_TKOH_0034683.694.648 / 47.257Complex
TkA08G127190LXL04_031742JCVI_TKOH_0034695.599.608 / 92.518Strict
TkA08G127200LXL04_031743JCVI_TKOH_0034697.939.496 / 36.154Review
TkA08G127330LXL04_031744JCVI_TKOH_0034699.3100.0 / 100.0Strict
TkA08G127340LXL04_031745JCVI_TKOH_00346100.090.89 / 85.8Strict
TkA08G127440LXL04_031746JCVI_TKOH_0034686.8100.0 / 100.0Review
TkA08G127530LXL04_031747JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G127590LXL04_031748JCVI_TKOH_0034699.2100.0 / 100.0Strict
TkA08G127630LXL04_031749JCVI_TKOH_0034690.7100.0 / 100.0Probable
TkA08G127640LXL04_031750JCVI_TKOH_0034699.4100.0 / 100.0Complex
TkA08G127660LXL04_031751JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G127910LXL04_031755JCVI_TKOH_0034682.3100.0 / 100.0Review
TkA08G128430LXL04_031757JCVI_TKOH_0034689.1100.0 / 99.361Review
TkA08G128450LXL04_031758JCVI_TKOH_0034699.6100.0 / 68.598Review
TkA08G128520LXL04_031759JCVI_TKOH_0034698.6100.0 / 100.0Strict
TkA08G128530LXL04_031760JCVI_TKOH_0034699.5100.0 / 100.0Strict
TkA08G128970LXL04_031764JCVI_TKOH_0034691.2100.0 / 56.72Complex
TkA08G129110LXL04_031767JCVI_TKOH_0034680.299.119 / 27.928Complex
TkA08G129220LXL04_031768JCVI_TKOH_00346100.090.421 / 81.992Review
TkA08G129230LXL04_031769JCVI_TKOH_0034696.0100.0 / 100.0Strict
TkA08G129360LXL04_031772JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G129370LXL04_031773JCVI_TKOH_0034696.579.861 / 10.942Complex
TkA08G129590LXL04_031775JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G129640LXL04_031777JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G129660LXL04_031778JCVI_TKOH_0034696.6100.0 / 100.0Strict
TkA08G129670LXL04_031779JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G129680LXL04_031780JCVI_TKOH_0034688.8100.0 / 93.403Review
TkA08G129690LXL04_031781JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G130040LXL04_031784JCVI_TKOH_0034695.490.909 / 30.036Review
TkA08G130060LXL04_031784JCVI_TKOH_0034695.494.103 / 31.565Review
TkA08G130070LXL04_031785JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G130160LXL04_031786JCVI_TKOH_0034697.8100.0 / 100.0Strict
TkA08G130170LXL04_031787JCVI_TKOH_0034696.3100.0 / 77.569Probable
TkA08G130420LXL04_031789JCVI_TKOH_00346100.0100.0 / 100.0Review
TkA08G130430LXL04_031790JCVI_TKOH_0034687.694.286 / 84.774Review
TkA08G130460LXL04_031791JCVI_TKOH_00346100.099.582 / 100.0Strict
TkA08G130560LXL04_031792JCVI_TKOH_0034696.2100.0 / 100.0Strict
TkA08G130570LXL04_031793JCVI_TKOH_0034690.5100.0 / 100.0Probable
TkA08G130580LXL04_031794JCVI_TKOH_0034699.2100.0 / 100.0Strict
TkA08G130590LXL04_031795JCVI_TKOH_0034698.997.653 / 80.148Complex
TkA08G130610LXL04_031797JCVI_TKOH_0034699.8100.0 / 100.0Strict
TkA08G130640LXL04_031798JCVI_TKOH_0034699.2100.0 / 100.0Strict
TkA08G130650LXL04_031799JCVI_TKOH_0034694.5100.0 / 100.0Probable
TkA08G130680LXL04_031800JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G130690LXL04_031801JCVI_TKOH_0034699.2100.0 / 100.0Strict
TkA08G130700LXL04_031802JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G130710LXL04_031803JCVI_TKOH_0034699.7100.0 / 100.0Strict
TkA08G130740LXL04_031804JCVI_TKOH_0034678.175.377 / 63.702Review
TkA08G130750LXL04_031805JCVI_TKOH_0034699.397.955 / 99.309Strict
TkA08G130810LXL04_031807JCVI_TKOH_0034698.363.309 / 91.667Review
TkA08G130830LXL04_031808JCVI_TKOH_0034675.5100.0 / 70.918Review
TkA08G130840LXL04_031809JCVI_TKOH_0034660.798.802 / 40.547Complex
TkA08G130900LXL04_031809JCVI_TKOH_0034695.3100.0 / 100.0Strict
TkA08G131130LXL04_031811JCVI_TKOH_0034699.1100.0 / 100.0Strict
TkA08G131140LXL04_031812JCVI_TKOH_0034688.3100.0 / 100.0Review
TkA08G131150LXL04_031813JCVI_TKOH_0034699.6100.0 / 100.0Strict
TkA08G131180LXL04_031814JCVI_TKOH_0034695.6100.0 / 99.586Complex
TkA08G131250LXL04_031818JCVI_TKOH_0034698.591.749 / 96.687Complex
TkA08G131260LXL04_031817JCVI_TKOH_0034665.3100.0 / 100.0Complex
TkA08G131270LXL04_031818JCVI_TKOH_0034662.8100.0 / 94.41Complex
TkA08G131280LXL04_031818JCVI_TKOH_0034666.2100.0 / 94.41Complex
TkA08G131370LXL04_031820JCVI_TKOH_0034659.172.245 / 78.437Complex
TkA08G131380LXL04_031821JCVI_TKOH_0034699.492.347 / 97.312Strict
TkA08G131390LXL04_031822JCVI_TKOH_0034699.7100.0 / 100.0Strict
TkA08G131400LXL04_031823JCVI_TKOH_0034699.4100.0 / 100.0Strict
TkA08G131410LXL04_031824JCVI_TKOH_0034684.497.637 / 100.0Review
TkA08G131610LXL04_031826JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G131800LXL04_031828JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G131820LXL04_031830JCVI_TKOH_0034639.527.931 / 6.593Complex
TkA08G131830LXL04_031830JCVI_TKOH_0034699.496.283 / 43.209Review
TkA08G132030LXL04_031833JCVI_TKOH_0034699.094.578 / 55.379Review
TkA08G132090LXL04_031834JCVI_TKOH_0034697.095.169 / 66.667Complex
TkA08G132250LXL04_031836JCVI_TKOH_0034698.8100.0 / 87.366Strict
TkA08G132290LXL04_031838JCVI_TKOH_0034698.999.815 / 88.797Strict
TkA08G132310LXL04_031839JCVI_TKOH_0034698.9100.0 / 100.0Strict
TkA08G132330LXL04_031840JCVI_TKOH_00346100.0100.0 / 98.069Strict
TkA08G132420LXL04_031841JCVI_TKOH_0034699.8100.0 / 90.943Complex
TkA08G132510LXL04_031843JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G132520LXL04_031844JCVI_TKOH_0034698.797.817 / 35.897Review
TkA08G132540LXL04_031845JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G132550LXL04_031846JCVI_TKOH_0034698.984.685 / 100.0Review
TkA08G132570LXL04_031847JCVI_TKOH_0034699.7100.0 / 56.342Review
TkA08G132630LXL04_031849JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G132660LXL04_031851JCVI_TKOH_0034699.792.365 / 87.007Complex
TkA08G132670LXL04_031852JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G132720LXL04_031853JCVI_TKOH_0034699.4100.0 / 93.023Strict
TkA08G132760LXL04_031854JCVI_TKOH_0034694.4100.0 / 93.333Probable
TkA08G132810LXL04_031855JCVI_TKOH_0034699.2100.0 / 100.0Complex
TkA08G132820LXL04_031856JCVI_TKOH_0034699.2100.0 / 61.421Review
TkA08G132900LXL04_031859JCVI_TKOH_0034698.198.886 / 44.386Review
TkA08G133130LXL04_031860JCVI_TKOH_0034690.083.636 / 89.316Probable
TkA08G133170LXL04_031863JCVI_TKOH_0034699.6100.0 / 100.0Strict
TkA08G133190LXL04_031864JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G133220LXL04_031865JCVI_TKOH_0034699.397.085 / 100.0Complex
TkA08G133240LXL04_031866JCVI_TKOH_00346100.0100.0 / 38.462Review
TkA08G133290LXL04_031867JCVI_TKOH_00346100.0100.0 / 43.608Review
TkA08G133390LXL04_031870JCVI_TKOH_0034699.5100.0 / 62.128Complex
TkA08G133400LXL04_031872JCVI_TKOH_0034698.9100.0 / 100.0Strict
TkA08G133430LXL04_031873JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G133690LXL04_031876JCVI_TKOH_0034694.183.678 / 86.005Probable
TkA08G133740LXL04_031877JCVI_TKOH_0034699.797.695 / 97.135Strict
TkA08G133750LXL04_031878JCVI_TKOH_0034697.1100.0 / 96.317Strict
TkA08G133780LXL04_031879JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G134140LXL04_031881JCVI_TKOH_0034699.8100.0 / 100.0Strict
TkA08G134220LXL04_031884JCVI_TKOH_00346100.094.094 / 57.895Review
TkA08G134280LXL04_031886JCVI_TKOH_00346100.0100.0 / 100.0Review
TkA08G134300LXL04_031887JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G134520LXL04_031890JCVI_TKOH_0034698.496.421 / 56.265Review
TkA08G134530LXL04_031891JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G134830LXL04_031896JCVI_TKOH_00346100.081.437 / 100.0Complex
TkA08G134880LXL04_031897JCVI_TKOH_0034688.5100.0 / 100.0Review
TkA08G134900LXL04_031896JCVI_TKOH_0034647.979.061 / 93.627Complex
TkA08G134920LXL04_031894JCVI_TKOH_0034651.696.471 / 97.98Complex
TkA08G135000LXL04_031898JCVI_TKOH_0034656.682.784 / 80.081Complex
TkA08G135210LXL04_031899JCVI_TKOH_0034690.1100.0 / 100.0Complex
TkA08G135220LXL04_031900JCVI_TKOH_0034699.398.662 / 99.327Strict
TkA08G135230LXL04_031901JCVI_TKOH_0034699.597.872 / 80.0Strict
TkA08G135240LXL04_031902JCVI_TKOH_0034696.693.078 / 79.129Probable
TkA08G135340LXL04_031905JCVI_TKOH_0034695.1100.0 / 99.919Strict
TkA08G135400LXL04_031907JCVI_TKOH_0034699.6100.0 / 100.0Strict
TkA08G135760LXL04_031908JCVI_TKOH_0034699.1100.0 / 100.0Strict
TkA08G135910LXL04_031910JCVI_TKOH_0034698.869.106 / 30.686Review
TkA08G135930LXL04_031915JCVI_TKOH_0034652.399.346 / 41.144Complex
TkA08G136370LXL04_031909JCVI_TKOH_0034657.398.507 / 20.266Complex
TkA08G136590LXL04_031915JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G136690LXL04_031909JCVI_TKOH_0034661.579.343 / 17.195Complex
TkA08G136720LXL04_031917JCVI_TKOH_0034697.690.934 / 51.719Review
TkA08G136730LXL04_031917JCVI_TKOH_0034688.695.359 / 37.031Complex
TkA08G136750LXL04_031918JCVI_TKOH_0034690.2100.0 / 95.726Probable
TkA08G136760LXL04_031919JCVI_TKOH_00346100.097.902 / 46.823Review
TkA08G136770LXL04_031919JCVI_TKOH_00346100.099.375 / 53.177Review
TkA08G136830LXL04_031920JCVI_TKOH_0034699.9100.0 / 71.584Probable
TkA08G136840LXL04_031921JCVI_TKOH_0034699.5100.0 / 100.0Strict