Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00346
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 781
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00346

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00346 Chr08 22809577-40062385 Chr07 856277-17709506 mixed High 200 anchors
Chr08 22809577-40062385 Chr07 856277-17709506 JCVI_TKOH_00346 · 781 gene pairs TkA08G088000 | LXL04_031118 | 77.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G088110 | LXL04_031119 | 74.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G088180 | LXL04_031121 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G088240 | LXL04_031122 | 94.7% | RBH_sequence_supported | Probable TkA08G088250 | LXL04_031123 | 89.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA08G088310 | LXL04_031125 | 99.2% | multi_source_to_OH1004 | Complex TkA08G088430 | LXL04_031126 | 99.6% | multi_source_to_OH1004 | Complex TkA08G088490 | LXL04_031128 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA08G088510 | LXL04_031129 | 95.6% | non_reciprocal_best_hit | Complex TkA08G088520 | LXL04_031130 | 100.0% | multi_source_to_OH1004 | Complex TkA08G088530 | LXL04_031131 | 99.5% | RBH_high_identity_coverage_synteny | Strict TkA08G088540 | LXL04_031132 | 100.0% | multi_source_to_OH1004 | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00346 Chr08:22809577-40062385 Chr07:856277-17709506 mixed 781 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 781 · Showing 1–200 · Page 1/4

TkA08G088000 → LXL04_031118
77.5%
TkA08G088110 → LXL04_031119
74.5%
TkA08G088180 → LXL04_031121
100.0%
TkA08G088240 → LXL04_031122
94.7%
TkA08G088250 → LXL04_031123
89.6%
TkA08G088310 → LXL04_031125
99.2%
TkA08G088430 → LXL04_031126
99.6%
TkA08G088490 → LXL04_031128
100.0%
TkA08G088510 → LXL04_031129
95.6%
TkA08G088520 → LXL04_031130
100.0%
TkA08G088530 → LXL04_031131
99.5%
TkA08G088540 → LXL04_031132
100.0%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA08G088000LXL04_031118JCVI_TKOH_0034677.5100.0 / 100.0Review
TkA08G088110LXL04_031119JCVI_TKOH_0034674.5100.0 / 78.462Review
TkA08G088180LXL04_031121JCVI_TKOH_00346100.026.606 / 21.481Review
TkA08G088240LXL04_031122JCVI_TKOH_0034694.7100.0 / 100.0Probable
TkA08G088250LXL04_031123JCVI_TKOH_0034689.6100.0 / 100.0Review
TkA08G088310LXL04_031125JCVI_TKOH_0034699.299.195 / 82.167Complex
TkA08G088430LXL04_031126JCVI_TKOH_0034699.6100.0 / 98.778Complex
TkA08G088490LXL04_031128JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G088510LXL04_031129JCVI_TKOH_0034695.692.623 / 84.962Complex
TkA08G088520LXL04_031130JCVI_TKOH_00346100.096.629 / 72.421Complex
TkA08G088530LXL04_031131JCVI_TKOH_0034699.5100.0 / 100.0Strict
TkA08G088540LXL04_031132JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G088690LXL04_031134JCVI_TKOH_0034696.768.593 / 46.064Complex
TkA08G088730LXL04_031136JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G088740LXL04_031136JCVI_TKOH_0034675.4100.0 / 68.449Complex
TkA08G088750LXL04_031138JCVI_TKOH_0034699.1100.0 / 86.038Complex
TkA08G089200LXL04_031136JCVI_TKOH_0034676.597.245 / 94.385Complex
TkA08G089230LXL04_031136JCVI_TKOH_0034681.4100.0 / 95.989Complex
TkA08G089260LXL04_031139JCVI_TKOH_0034699.268.852 / 31.579Complex
TkA08G089580LXL04_031142JCVI_TKOH_0034697.3100.0 / 47.804Review
TkA08G089590LXL04_031142JCVI_TKOH_0034690.280.952 / 52.713Complex
TkA08G089640LXL04_031143JCVI_TKOH_00346100.0100.0 / 100.0Review
TkA08G089680LXL04_031143JCVI_TKOH_0034669.487.143 / 87.129Complex
TkA08G089790LXL04_031144JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G089800LXL04_031145JCVI_TKOH_0034697.9100.0 / 100.0Strict
TkA08G089820LXL04_031146JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G089850LXL04_031147JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G089860LXL04_031148JCVI_TKOH_0034699.797.767 / 100.0Strict
TkA08G089870LXL04_031149JCVI_TKOH_0034693.7100.0 / 100.0Probable
TkA08G090170LXL04_031155JCVI_TKOH_0034698.5100.0 / 74.573Probable
TkA08G090190LXL04_031157JCVI_TKOH_0034699.496.286 / 83.005Strict
TkA08G090220LXL04_031158JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G090230LXL04_031159JCVI_TKOH_0034697.4100.0 / 100.0Strict
TkA08G090240LXL04_031160JCVI_TKOH_00346100.097.189 / 99.588Complex
TkA08G090260LXL04_031161JCVI_TKOH_00346100.098.312 / 75.161Complex
TkA08G090490LXL04_031163JCVI_TKOH_0034699.7100.0 / 100.0Complex
TkA08G090830LXL04_031164JCVI_TKOH_0034699.693.688 / 100.0Complex
TkA08G090850LXL04_031166JCVI_TKOH_0034699.6100.0 / 100.0Strict
TkA08G090990LXL04_031167JCVI_TKOH_0034699.7100.0 / 100.0Complex
TkA08G091860LXL04_031172JCVI_TKOH_0034699.196.936 / 97.479Review
TkA08G092090LXL04_031175JCVI_TKOH_0034699.1100.0 / 100.0Strict
TkA08G092160LXL04_031178JCVI_TKOH_00346100.090.604 / 78.488Probable
TkA08G092190LXL04_031180JCVI_TKOH_0034699.7100.0 / 100.0Complex
TkA08G092210LXL04_031181JCVI_TKOH_00346100.099.612 / 95.539Strict
TkA08G092230LXL04_031182JCVI_TKOH_0034699.682.867 / 9.084Complex
TkA08G092280LXL04_031183JCVI_TKOH_0034699.1100.0 / 74.558Complex
TkA08G092310LXL04_031182JCVI_TKOH_0034698.497.674 / 14.527Review
TkA08G092360LXL04_031183JCVI_TKOH_00346100.0100.0 / 74.558Complex
TkA08G092370LXL04_031184JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G092390LXL04_031185JCVI_TKOH_00346100.0100.0 / 100.0Review
TkA08G092400LXL04_031186JCVI_TKOH_00346100.0100.0 / 41.012Review
TkA08G092470LXL04_031187JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G092500LXL04_031189JCVI_TKOH_00346100.0100.0 / 100.0Review
TkA08G092510LXL04_031190JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G092530LXL04_031191JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G093200LXL04_031192JCVI_TKOH_00346100.0100.0 / 30.22Review
TkA08G093270LXL04_031195JCVI_TKOH_0034697.899.639 / 57.717Review
TkA08G093390LXL04_031197JCVI_TKOH_0034699.699.821 / 98.584Complex
TkA08G093760LXL04_031200JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G093810LXL04_031201JCVI_TKOH_0034667.888.303 / 100.0Complex
TkA08G093890LXL04_031201JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G093920LXL04_031203JCVI_TKOH_0034683.3100.0 / 100.0Complex
TkA08G094000LXL04_031204JCVI_TKOH_00346100.0100.0 / 39.845Review
TkA08G094010LXL04_031204JCVI_TKOH_0034699.2100.0 / 39.514Review
TkA08G094110LXL04_031205JCVI_TKOH_0034692.2100.0 / 93.991Complex
TkA08G094150LXL04_031206JCVI_TKOH_0034699.8100.0 / 100.0Strict
TkA08G094180LXL04_031207JCVI_TKOH_00346100.0100.0 / 54.455Review
TkA08G094790LXL04_031208JCVI_TKOH_0034685.893.267 / 98.011Review
TkA08G094820LXL04_031209JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G095190LXL04_031212JCVI_TKOH_0034699.2100.0 / 100.0Strict
TkA08G095200LXL04_031213JCVI_TKOH_0034698.499.317 / 70.209Probable
TkA08G095210LXL04_031213JCVI_TKOH_0034699.4100.0 / 24.96Review
TkA08G095220LXL04_031214JCVI_TKOH_0034694.5100.0 / 100.0Probable
TkA08G095340LXL04_031215JCVI_TKOH_0034691.898.802 / 32.911Complex
TkA08G095350LXL04_031215JCVI_TKOH_0034699.388.454 / 45.253Review
TkA08G095380LXL04_031216JCVI_TKOH_0034697.871.774 / 40.271Review
TkA08G095410LXL04_031217JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G095460LXL04_031218JCVI_TKOH_0034699.5100.0 / 100.0Strict
TkA08G095490LXL04_031219JCVI_TKOH_0034694.754.589 / 100.0Review
TkA08G095500LXL04_031221JCVI_TKOH_00346100.098.592 / 54.124Review
TkA08G095780LXL04_031223JCVI_TKOH_0034699.4100.0 / 100.0Strict
TkA08G095800LXL04_031224JCVI_TKOH_0034698.499.875 / 96.64Strict
TkA08G095810LXL04_031225JCVI_TKOH_0034699.497.161 / 28.361Review
TkA08G095970LXL04_031229JCVI_TKOH_0034698.8100.0 / 100.0Review
TkA08G095980LXL04_031230JCVI_TKOH_0034699.795.146 / 80.328Complex
TkA08G096030LXL04_031231JCVI_TKOH_00346100.0100.0 / 94.315Complex
TkA08G096040LXL04_031232JCVI_TKOH_0034697.798.519 / 25.725Review
TkA08G096070LXL04_031232JCVI_TKOH_00346100.0100.0 / 69.052Review
TkA08G096080LXL04_031234JCVI_TKOH_0034699.594.472 / 95.431Strict
TkA08G096200LXL04_031235JCVI_TKOH_00346100.094.695 / 56.398Review
TkA08G096410LXL04_031237JCVI_TKOH_0034682.484.103 / 100.0Complex
TkA08G096420LXL04_031239JCVI_TKOH_0034694.998.879 / 100.0Complex
TkA08G096440LXL04_031240JCVI_TKOH_0034699.5100.0 / 100.0Complex
TkA08G096550LXL04_031241JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G096670LXL04_031242JCVI_TKOH_00346100.081.667 / 26.776Review
TkA08G096680LXL04_031242JCVI_TKOH_00346100.067.939 / 24.317Complex
TkA08G096710LXL04_031243JCVI_TKOH_0034699.1100.0 / 37.955Review
TkA08G096730LXL04_031244JCVI_TKOH_0034699.692.683 / 44.229Review
TkA08G096740LXL04_031245JCVI_TKOH_0034643.488.477 / 76.678Complex
TkA08G096920LXL04_031247JCVI_TKOH_0034680.1100.0 / 100.0Review
TkA08G096930LXL04_031248JCVI_TKOH_0034695.0100.0 / 100.0Strict
TkA08G097040LXL04_031252JCVI_TKOH_0034699.499.717 / 96.175Strict
TkA08G097340LXL04_031254JCVI_TKOH_0034696.0100.0 / 100.0Strict
TkA08G097460LXL04_031255JCVI_TKOH_0034689.9100.0 / 50.681Review
TkA08G097470LXL04_031256JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G097490LXL04_031257JCVI_TKOH_0034699.6100.0 / 88.971Strict
TkA08G097690LXL04_031258JCVI_TKOH_0034696.8100.0 / 100.0Strict
TkA08G097710LXL04_031259JCVI_TKOH_0034699.0100.0 / 100.0Strict
TkA08G097730LXL04_031260JCVI_TKOH_0034691.5100.0 / 57.271Review
TkA08G097740LXL04_031261JCVI_TKOH_00346100.093.168 / 13.381Review
TkA08G097750LXL04_031262JCVI_TKOH_00346100.097.135 / 56.547Review
TkA08G097760LXL04_031263JCVI_TKOH_00346100.086.121 / 61.893Review
TkA08G097770LXL04_031264JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G097800LXL04_031265JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G098080LXL04_031266JCVI_TKOH_0034699.892.176 / 59.703Review
TkA08G098210LXL04_031268JCVI_TKOH_0034698.866.935 / 38.967Review
TkA08G098620LXL04_031270JCVI_TKOH_0034699.0100.0 / 94.495Complex
TkA08G099130LXL04_031275JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G099140LXL04_031276JCVI_TKOH_0034699.7100.0 / 100.0Strict
TkA08G099150LXL04_031277JCVI_TKOH_0034696.1100.0 / 96.36Strict
TkA08G099180LXL04_031279JCVI_TKOH_0034693.198.861 / 98.8Probable
TkA08G099250LXL04_031280JCVI_TKOH_00346100.0100.0 / 92.891Complex
TkA08G099270LXL04_031281JCVI_TKOH_00346100.095.64 / 98.209Strict
TkA08G099340LXL04_031282JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G099350LXL04_031283JCVI_TKOH_0034693.9100.0 / 100.0Probable
TkA08G099560LXL04_031284JCVI_TKOH_0034656.583.969 / 50.192Complex
TkA08G099610LXL04_031284JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G099940LXL04_031286JCVI_TKOH_0034650.883.178 / 74.699Review
TkA08G099970LXL04_031287JCVI_TKOH_0034699.1100.0 / 53.271Review
TkA08G100020LXL04_031288JCVI_TKOH_0034699.9100.0 / 100.0Strict
TkA08G100060LXL04_031290JCVI_TKOH_0034699.799.437 / 89.367Strict
TkA08G100130LXL04_031291JCVI_TKOH_0034697.998.813 / 38.32Review
TkA08G100170LXL04_031295JCVI_TKOH_0034681.497.26 / 19.386Complex
TkA08G100260LXL04_031293JCVI_TKOH_0034677.793.053 / 100.0Complex
TkA08G100380LXL04_031293JCVI_TKOH_0034681.391.091 / 100.0Review
TkA08G100480LXL04_031295JCVI_TKOH_0034682.794.795 / 23.345Complex
TkA08G100510LXL04_031295JCVI_TKOH_0034690.697.994 / 21.365Complex
TkA08G100540LXL04_031296JCVI_TKOH_0034675.3100.0 / 95.181Complex
TkA08G100550LXL04_031297JCVI_TKOH_00346100.090.761 / 68.443Complex
TkA08G100560LXL04_031295JCVI_TKOH_0034690.697.994 / 21.365Complex
TkA08G100640LXL04_031297JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G100650LXL04_031298JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G100660LXL04_031299JCVI_TKOH_0034698.2100.0 / 20.244Review
TkA08G100670LXL04_031299JCVI_TKOH_0034693.696.911 / 65.0Review
TkA08G100730LXL04_031300JCVI_TKOH_0034699.8100.0 / 100.0Complex
TkA08G100800LXL04_031305JCVI_TKOH_0034699.8100.0 / 100.0Complex
TkA08G100810LXL04_031306JCVI_TKOH_0034690.2100.0 / 100.0Probable
TkA08G101020LXL04_031308JCVI_TKOH_0034689.370.222 / 48.899Complex
TkA08G101120LXL04_031310JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G101130LXL04_031311JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G101150LXL04_031313JCVI_TKOH_0034698.7100.0 / 64.835Review
TkA08G101160LXL04_031314JCVI_TKOH_00346100.0100.0 / 85.373Strict
TkA08G101170LXL04_031315JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G101180LXL04_031316JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G101190LXL04_031317JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G101240LXL04_031319JCVI_TKOH_0034699.583.539 / 74.908Complex
TkA08G101280LXL04_031320JCVI_TKOH_0034699.6100.0 / 76.957Probable
TkA08G101290LXL04_031321JCVI_TKOH_00346100.098.626 / 95.733Strict
TkA08G101300LXL04_031322JCVI_TKOH_0034698.2100.0 / 46.849Review
TkA08G101310LXL04_031322JCVI_TKOH_0034698.8100.0 / 46.301Review
TkA08G101320LXL04_031323JCVI_TKOH_0034698.7100.0 / 100.0Strict
TkA08G101560LXL04_031328JCVI_TKOH_0034699.699.232 / 95.092Complex
TkA08G101670LXL04_031329JCVI_TKOH_0034699.4100.0 / 16.126Review
TkA08G101690LXL04_031330JCVI_TKOH_00346100.096.084 / 53.88Review
TkA08G101720LXL04_031330JCVI_TKOH_0034679.729.317 / 10.835Complex
TkA08G101750LXL04_031331JCVI_TKOH_0034679.5100.0 / 100.0Complex
TkA08G101920LXL04_031334JCVI_TKOH_00346100.099.598 / 84.932Strict
TkA08G101930LXL04_031335JCVI_TKOH_00346100.0100.0 / 73.709Probable
TkA08G101940LXL04_031336JCVI_TKOH_0034699.698.608 / 60.121Review
TkA08G101950LXL04_031339JCVI_TKOH_0034697.7100.0 / 100.0Strict
TkA08G102120LXL04_031340JCVI_TKOH_0034699.4100.0 / 100.0Strict
TkA08G102360LXL04_031342JCVI_TKOH_0034697.893.145 / 78.571Complex
TkA08G102400LXL04_031343JCVI_TKOH_00346100.097.448 / 99.762Strict
TkA08G102410LXL04_031345JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G102440LXL04_031346JCVI_TKOH_0034689.194.483 / 34.93Complex
TkA08G102500LXL04_031347JCVI_TKOH_0034699.8100.0 / 30.13Review
TkA08G102520LXL04_031349JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G102530LXL04_031350JCVI_TKOH_0034698.7100.0 / 100.0Review
TkA08G102610LXL04_031351JCVI_TKOH_0034694.9100.0 / 100.0Probable
TkA08G102840LXL04_031353JCVI_TKOH_00346100.0100.0 / 100.0Complex
TkA08G102850LXL04_031354JCVI_TKOH_0034699.0100.0 / 88.889Strict
TkA08G102860LXL04_031355JCVI_TKOH_0034699.699.642 / 87.284Strict
TkA08G102870LXL04_031356JCVI_TKOH_0034697.784.047 / 44.72Complex
TkA08G102880LXL04_031357JCVI_TKOH_0034683.298.873 / 99.469Review
TkA08G102900LXL04_031358JCVI_TKOH_0034699.289.384 / 56.034Review
TkA08G102950LXL04_031360JCVI_TKOH_0034689.1100.0 / 84.049Review
TkA08G103000LXL04_031363JCVI_TKOH_0034683.2100.0 / 99.896Complex
TkA08G103070LXL04_031361JCVI_TKOH_0034697.494.926 / 48.793Review
TkA08G103090LXL04_031362JCVI_TKOH_0034699.3100.0 / 100.0Complex
TkA08G103100LXL04_031363JCVI_TKOH_0034699.1100.0 / 100.0Complex
TkA08G103130LXL04_031364JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G103140LXL04_031365JCVI_TKOH_00346100.093.75 / 100.0Strict
TkA08G103150LXL04_031366JCVI_TKOH_0034699.799.74 / 98.21Strict
TkA08G103170LXL04_031367JCVI_TKOH_0034696.9100.0 / 100.0Strict
TkA08G103180LXL04_031368JCVI_TKOH_0034699.5100.0 / 100.0Strict
TkA08G103460LXL04_031371JCVI_TKOH_00346100.0100.0 / 100.0Strict
TkA08G103680LXL04_031374JCVI_TKOH_00346100.0100.0 / 100.0Review
TkA08G104000LXL04_031375JCVI_TKOH_0034699.998.333 / 70.287Probable
TkA08G104010LXL04_031376JCVI_TKOH_0034698.4100.0 / 100.0Strict
TkA08G104060LXL04_031377JCVI_TKOH_00346100.030.07 / 26.584Review