Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00271

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 127

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00271

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00271 Chr06 18062180-21563327 Chr05 106323981-109780666 mixed High 127 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00271`	Chr06:18062180-21563327	Chr05:106323981-109780666	mixed	127	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 127 · Showing 1–127 · Page 1/1

Download All Anchors TSV

TkA06G067520 → LXL04_025322

95.3%

TkA06G067540 → LXL04_025321

90.2%

TkA06G067730 → LXL04_025320

99.9%

TkA06G067740 → LXL04_025317

99.5%

TkA06G067750 → LXL04_025314

99.7%

TkA06G067760 → LXL04_025313

94.5%

TkA06G068560 → LXL04_025311

100.0%

TkA06G068580 → LXL04_025310

100.0%

TkA06G068590 → LXL04_025309

100.0%

TkA06G068600 → LXL04_025308

99.2%

TkA06G068610 → LXL04_025307

98.5%

TkA06G068640 → LXL04_025306

99.9%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA06G067520`	`LXL04_025322`	`JCVI_TKOH_00271`	95.3	100.0 / 40.226	Review
`TkA06G067540`	`LXL04_025321`	`JCVI_TKOH_00271`	90.2	100.0 / 97.465	Probable
`TkA06G067730`	`LXL04_025320`	`JCVI_TKOH_00271`	99.9	100.0 / 100.0	Strict
`TkA06G067740`	`LXL04_025317`	`JCVI_TKOH_00271`	99.5	99.091 / 83.525	Strict
`TkA06G067750`	`LXL04_025314`	`JCVI_TKOH_00271`	99.7	100.0 / 100.0	Strict
`TkA06G067760`	`LXL04_025313`	`JCVI_TKOH_00271`	94.5	98.446 / 84.81	Probable
`TkA06G068560`	`LXL04_025311`	`JCVI_TKOH_00271`	100.0	100.0 / 98.196	Strict
`TkA06G068580`	`LXL04_025310`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Complex
`TkA06G068590`	`LXL04_025309`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G068600`	`LXL04_025308`	`JCVI_TKOH_00271`	99.2	97.727 / 97.93	Complex
`TkA06G068610`	`LXL04_025307`	`JCVI_TKOH_00271`	98.5	64.455 / 23.735	Complex
`TkA06G068640`	`LXL04_025306`	`JCVI_TKOH_00271`	99.9	100.0 / 100.0	Complex
`TkA06G068660`	`LXL04_025305`	`JCVI_TKOH_00271`	99.4	100.0 / 100.0	Complex
`TkA06G068690`	`LXL04_025304`	`JCVI_TKOH_00271`	99.5	100.0 / 100.0	Strict
`TkA06G068840`	`LXL04_025303`	`JCVI_TKOH_00271`	98.4	100.0 / 100.0	Strict
`TkA06G068890`	`LXL04_025302`	`JCVI_TKOH_00271`	100.0	98.75 / 100.0	Strict
`TkA06G068950`	`LXL04_025301`	`JCVI_TKOH_00271`	74.6	100.0 / 100.0	Review
`TkA06G069030`	`LXL04_025298`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G069100`	`LXL04_025297`	`JCVI_TKOH_00271`	99.3	99.206 / 98.315	Strict
`TkA06G069290`	`LXL04_025295`	`JCVI_TKOH_00271`	99.6	100.0 / 100.0	Strict
`TkA06G069720`	`LXL04_025293`	`JCVI_TKOH_00271`	100.0	100.0 / 64.327	Complex
`TkA06G069740`	`LXL04_025292`	`JCVI_TKOH_00271`	80.1	93.023 / 37.7	Complex
`TkA06G069760`	`LXL04_025292`	`JCVI_TKOH_00271`	55.4	76.755 / 50.639	Complex
`TkA06G069770`	`LXL04_025292`	`JCVI_TKOH_00271`	84.4	84.211 / 50.319	Complex
`TkA06G069940`	`LXL04_025286`	`JCVI_TKOH_00271`	95.0	100.0 / 92.021	Strict
`TkA06G070100`	`LXL04_025285`	`JCVI_TKOH_00271`	90.5	79.938 / 75.816	Complex
`TkA06G070130`	`LXL04_025282`	`JCVI_TKOH_00271`	98.0	78.4 / 13.99	Complex
`TkA06G070140`	`LXL04_025282`	`JCVI_TKOH_00271`	98.0	100.0 / 28.765	Review
`TkA06G070150`	`LXL04_025281`	`JCVI_TKOH_00271`	99.5	100.0 / 100.0	Strict
`TkA06G070170`	`LXL04_025280`	`JCVI_TKOH_00271`	99.8	100.0 / 100.0	Strict
`TkA06G070310`	`LXL04_025278`	`JCVI_TKOH_00271`	87.6	100.0 / 94.325	Complex
`TkA06G070370`	`LXL04_025277`	`JCVI_TKOH_00271`	100.0	100.0 / 93.642	Strict
`TkA06G070400`	`LXL04_025276`	`JCVI_TKOH_00271`	99.4	100.0 / 72.902	Complex
`TkA06G070650`	`LXL04_025273`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G070780`	`LXL04_025270`	`JCVI_TKOH_00271`	100.0	94.656 / 84.068	Review
`TkA06G070810`	`LXL04_025269`	`JCVI_TKOH_00271`	97.5	66.387 / 41.799	Review
`TkA06G070920`	`LXL04_025268`	`JCVI_TKOH_00271`	92.8	100.0 / 97.297	Probable
`TkA06G070930`	`LXL04_025267`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G070940`	`LXL04_025266`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Complex
`TkA06G070950`	`LXL04_025265`	`JCVI_TKOH_00271`	99.8	100.0 / 100.0	Complex
`TkA06G070980`	`LXL04_025264`	`JCVI_TKOH_00271`	98.7	100.0 / 100.0	Strict
`TkA06G071010`	`LXL04_025263`	`JCVI_TKOH_00271`	99.6	100.0 / 75.294	Probable
`TkA06G071190`	`LXL04_025262`	`JCVI_TKOH_00271`	99.4	100.0 / 100.0	Strict
`TkA06G071290`	`LXL04_025260`	`JCVI_TKOH_00271`	100.0	98.742 / 70.721	Probable
`TkA06G071390`	`LXL04_025258`	`JCVI_TKOH_00271`	96.4	100.0 / 100.0	Complex
`TkA06G071410`	`LXL04_025257`	`JCVI_TKOH_00271`	99.2	100.0 / 100.0	Strict
`TkA06G071440`	`LXL04_025255`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G071460`	`LXL04_025254`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G071540`	`LXL04_025253`	`JCVI_TKOH_00271`	99.0	100.0 / 75.929	Review
`TkA06G071880`	`LXL04_025249`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Review
`TkA06G072000`	`LXL04_025248`	`JCVI_TKOH_00271`	98.8	100.0 / 20.865	Review
`TkA06G072010`	`LXL04_025248`	`JCVI_TKOH_00271`	99.7	98.408 / 47.201	Review
`TkA06G072020`	`LXL04_025248`	`JCVI_TKOH_00271`	100.0	98.851 / 21.883	Review
`TkA06G072030`	`LXL04_025247`	`JCVI_TKOH_00271`	99.1	100.0 / 90.678	Complex
`TkA06G072040`	`LXL04_025246`	`JCVI_TKOH_00271`	84.2	100.0 / 100.0	Review
`TkA06G072210`	`LXL04_025243`	`JCVI_TKOH_00271`	100.0	100.0 / 78.744	Probable
`TkA06G072480`	`LXL04_025238`	`JCVI_TKOH_00271`	95.0	100.0 / 100.0	Strict
`TkA06G072780`	`LXL04_025236`	`JCVI_TKOH_00271`	100.0	97.861 / 82.063	Strict
`TkA06G072900`	`LXL04_025235`	`JCVI_TKOH_00271`	99.5	100.0 / 100.0	Strict
`TkA06G072910`	`LXL04_025234`	`JCVI_TKOH_00271`	97.1	93.419 / 49.799	Review
`TkA06G072930`	`LXL04_025234`	`JCVI_TKOH_00271`	99.4	94.409 / 46.634	Review
`TkA06G073220`	`LXL04_025230`	`JCVI_TKOH_00271`	99.7	100.0 / 100.0	Review
`TkA06G073230`	`LXL04_025229`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G073390`	`LXL04_025225`	`JCVI_TKOH_00271`	100.0	100.0 / 28.606	Review
`TkA06G073400`	`LXL04_025225`	`JCVI_TKOH_00271`	94.3	100.0 / 63.462	Review
`TkA06G073580`	`LXL04_025222`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Complex
`TkA06G073650`	`LXL04_025220`	`JCVI_TKOH_00271`	64.6	89.231 / 23.95	Complex
`TkA06G074250`	`LXL04_025218`	`JCVI_TKOH_00271`	99.8	100.0 / 77.401	Complex
`TkA06G074260`	`LXL04_025217`	`JCVI_TKOH_00271`	100.0	100.0 / 12.097	Review
`TkA06G074270`	`LXL04_025217`	`JCVI_TKOH_00271`	84.3	87.218 / 26.613	Complex
`TkA06G074560`	`LXL04_025215`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G074720`	`LXL04_025214`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Complex
`TkA06G075120`	`LXL04_025211`	`JCVI_TKOH_00271`	99.6	100.0 / 100.0	Complex
`TkA06G075130`	`LXL04_025210`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Review
`TkA06G075210`	`LXL04_025209`	`JCVI_TKOH_00271`	99.2	100.0 / 100.0	Strict
`TkA06G075250`	`LXL04_025208`	`JCVI_TKOH_00271`	99.5	100.0 / 100.0	Strict
`TkA06G075370`	`LXL04_025207`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G075420`	`LXL04_025206`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G075610`	`LXL04_025205`	`JCVI_TKOH_00271`	96.4	97.391 / 89.286	Complex
`TkA06G075730`	`LXL04_025201`	`JCVI_TKOH_00271`	98.6	100.0 / 100.0	Strict
`TkA06G075750`	`LXL04_025200`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G075760`	`LXL04_025199`	`JCVI_TKOH_00271`	99.4	100.0 / 100.0	Strict
`TkA06G075790`	`LXL04_025198`	`JCVI_TKOH_00271`	99.4	100.0 / 100.0	Complex
`TkA06G075810`	`LXL04_025197`	`JCVI_TKOH_00271`	92.9	100.0 / 96.247	Probable
`TkA06G075900`	`LXL04_025195`	`JCVI_TKOH_00271`	81.6	96.311 / 96.377	Review
`TkA06G076040`	`LXL04_025193`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G076200`	`LXL04_025190`	`JCVI_TKOH_00271`	99.7	100.0 / 100.0	Strict
`TkA06G076340`	`LXL04_025187`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict
`TkA06G076820`	`LXL04_025181`	`JCVI_TKOH_00271`	97.7	100.0 / 100.0	Strict
`TkA06G077310`	`LXL04_025172`	`JCVI_TKOH_00271`	99.4	100.0 / 100.0	Strict
`TkA06G077410`	`LXL04_025169`	`JCVI_TKOH_00271`	86.6	100.0 / 100.0	Review
`TkA06G077500`	`LXL04_025166`	`JCVI_TKOH_00271`	99.6	100.0 / 100.0	Strict
`TkA06G077660`	`LXL04_025163`	`JCVI_TKOH_00271`	94.3	100.0 / 99.623	Complex
`TkA06G077910`	`LXL04_025158`	`JCVI_TKOH_00271`	97.8	100.0 / 100.0	Complex
`TkA06G078170`	`LXL04_025156`	`JCVI_TKOH_00271`	99.3	100.0 / 100.0	Complex
`TkA06G078250`	`LXL04_025156`	`JCVI_TKOH_00271`	83.8	100.0 / 54.676	Complex
`TkA06G078260`	`LXL04_025155`	`JCVI_TKOH_00271`	97.7	100.0 / 100.0	Strict
`TkA06G078450`	`LXL04_025151`	`JCVI_TKOH_00271`	97.6	100.0 / 100.0	Strict
`TkA06G078460`	`LXL04_025150`	`JCVI_TKOH_00271`	94.9	100.0 / 100.0	Probable
`TkA06G078470`	`LXL04_025149`	`JCVI_TKOH_00271`	98.7	100.0 / 100.0	Review
`TkA06G078480`	`LXL04_025148`	`JCVI_TKOH_00271`	99.5	100.0 / 100.0	Complex
`TkA06G078490`	`LXL04_025147`	`JCVI_TKOH_00271`	99.6	100.0 / 100.0	Strict
`TkA06G078550`	`LXL04_025146`	`JCVI_TKOH_00271`	99.6	100.0 / 52.411	Review
`TkA06G078560`	`LXL04_025145`	`JCVI_TKOH_00271`	62.6	100.0 / 52.75	Complex
`TkA06G078590`	`LXL04_025145`	`JCVI_TKOH_00271`	99.5	87.678 / 46.25	Review
`TkA06G078600`	`LXL04_025145`	`JCVI_TKOH_00271`	98.6	100.0 / 52.75	Review
`TkA06G078620`	`LXL04_025144`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Complex
`TkA06G078710`	`LXL04_025143`	`JCVI_TKOH_00271`	98.8	100.0 / 100.0	Review
`TkA06G078790`	`LXL04_025142`	`JCVI_TKOH_00271`	99.4	100.0 / 100.0	Strict
`TkA06G078820`	`LXL04_025140`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Complex
`TkA06G078860`	`LXL04_025139`	`JCVI_TKOH_00271`	98.7	100.0 / 89.714	Strict
`TkA06G078870`	`LXL04_025138`	`JCVI_TKOH_00271`	91.4	93.837 / 98.812	Probable
`TkA06G078970`	`LXL04_025137`	`JCVI_TKOH_00271`	95.4	95.48 / 95.218	Review
`TkA06G078990`	`LXL04_025136`	`JCVI_TKOH_00271`	98.3	99.813 / 81.003	Complex
`TkA06G079010`	`LXL04_025135`	`JCVI_TKOH_00271`	100.0	100.0 / 73.394	Probable
`TkA06G079020`	`LXL04_025133`	`JCVI_TKOH_00271`	72.0	100.0 / 100.0	Complex
`TkA06G079070`	`LXL04_025132`	`JCVI_TKOH_00271`	72.0	88.337 / 42.421	Complex
`TkA06G079090`	`LXL04_025132`	`JCVI_TKOH_00271`	76.7	88.993 / 42.421	Complex
`TkA06G079470`	`LXL04_025132`	`JCVI_TKOH_00271`	75.5	97.509 / 39.706	Complex
`TkA06G079610`	`LXL04_025131`	`JCVI_TKOH_00271`	77.2	98.23 / 96.037	Complex
`TkA06G079730`	`LXL04_025129`	`JCVI_TKOH_00271`	99.8	100.0 / 100.0	Strict
`TkA06G079890`	`LXL04_025125`	`JCVI_TKOH_00271`	93.3	50.074 / 100.0	Review
`TkA06G079980`	`LXL04_025124`	`JCVI_TKOH_00271`	100.0	86.434 / 47.752	Review
`TkA06G080220`	`LXL04_025121`	`JCVI_TKOH_00271`	99.2	100.0 / 48.31	Review
`TkA06G080260`	`LXL04_025118`	`JCVI_TKOH_00271`	99.2	100.0 / 100.0	Strict
`TkA06G080290`	`LXL04_025117`	`JCVI_TKOH_00271`	85.6	100.0 / 100.0	Review
`TkA06G080360`	`LXL04_025116`	`JCVI_TKOH_00271`	100.0	100.0 / 100.0	Strict