Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00310
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 288
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00310

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00310 Chr07 81307033-93828302 Chr06 94464106-106885822 mixed High 200 anchors
Chr07 81307033-93828302 Chr06 94464106-106885822 JCVI_TKOH_00310 · 288 gene pairs TkA07G324760 | LXL04_029571 | 81.9% | non_reciprocal_best_hit | Complex TkA07G325020 | LXL04_029575 | 96.3% | sequence_supported_annotation_or_model_conflict | Review TkA07G325940 | LXL04_029580 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G325950 | LXL04_029581 | 94.9% | RBH_sequence_supported | Probable TkA07G325960 | LXL04_029582 | 99.2% | multi_source_to_OH1004 | Complex TkA07G326260 | LXL04_029585 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G326740 | LXL04_029586 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G327130 | LXL04_029594 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA07G327160 | LXL04_029595 | 99.4% | non_reciprocal_best_hit | Complex TkA07G327530 | LXL04_029596 | 95.9% | RBH_high_identity_coverage_synteny | Strict TkA07G327620 | LXL04_029599 | 98.6% | sequence_supported_annotation_or_model_conflict | Review TkA07G327630 | LXL04_029600 | 75.3% | multi_source_to_OH1004 | Complex
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00310 Chr07:81307033-93828302 Chr06:94464106-106885822 mixed 288 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 288 · Showing 1–200 · Page 1/2

TkA07G324760 → LXL04_029571
81.9%
TkA07G325020 → LXL04_029575
96.3%
TkA07G325940 → LXL04_029580
100.0%
TkA07G325950 → LXL04_029581
94.9%
TkA07G325960 → LXL04_029582
99.2%
TkA07G326260 → LXL04_029585
100.0%
TkA07G326740 → LXL04_029586
100.0%
TkA07G327130 → LXL04_029594
99.4%
TkA07G327160 → LXL04_029595
99.4%
TkA07G327530 → LXL04_029596
95.9%
TkA07G327620 → LXL04_029599
98.6%
TkA07G327630 → LXL04_029600
75.3%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA07G324760LXL04_029571JCVI_TKOH_0031081.9100.0 / 68.404Complex
TkA07G325020LXL04_029575JCVI_TKOH_0031096.397.122 / 84.375Review
TkA07G325940LXL04_029580JCVI_TKOH_00310100.0100.0 / 64.13Review
TkA07G325950LXL04_029581JCVI_TKOH_0031094.9100.0 / 89.294Probable
TkA07G325960LXL04_029582JCVI_TKOH_0031099.2100.0 / 100.0Complex
TkA07G326260LXL04_029585JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G326740LXL04_029586JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G327130LXL04_029594JCVI_TKOH_0031099.496.97 / 99.379Strict
TkA07G327160LXL04_029595JCVI_TKOH_0031099.459.341 / 64.542Complex
TkA07G327530LXL04_029596JCVI_TKOH_0031095.991.667 / 86.55Strict
TkA07G327620LXL04_029599JCVI_TKOH_0031098.6100.0 / 49.434Review
TkA07G327630LXL04_029600JCVI_TKOH_0031075.3100.0 / 88.889Complex
TkA07G327730LXL04_029602JCVI_TKOH_00310100.0100.0 / 85.621Review
TkA07G327930LXL04_029603JCVI_TKOH_0031099.7100.0 / 100.0Strict
TkA07G328010LXL04_029606JCVI_TKOH_0031063.296.386 / 59.169Complex
TkA07G328090LXL04_029607JCVI_TKOH_0031099.3100.0 / 58.8Review
TkA07G328110LXL04_029608JCVI_TKOH_0031098.794.888 / 48.849Review
TkA07G328130LXL04_029608JCVI_TKOH_0031096.899.048 / 49.836Review
TkA07G328320LXL04_029609JCVI_TKOH_00310100.0100.0 / 100.0Review
TkA07G328840LXL04_029614JCVI_TKOH_00310100.098.315 / 54.096Review
TkA07G328850LXL04_029615JCVI_TKOH_0031098.4100.0 / 92.809Review
TkA07G329010LXL04_029617JCVI_TKOH_00310100.098.881 / 54.639Review
TkA07G329440LXL04_029619JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G329470LXL04_029619JCVI_TKOH_0031066.361.029 / 99.412Complex
TkA07G329610LXL04_029620JCVI_TKOH_00310100.0100.0 / 47.222Review
TkA07G329620LXL04_029621JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G329690LXL04_029623JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G329700LXL04_029624JCVI_TKOH_0031099.6100.0 / 100.0Complex
TkA07G330650LXL04_029619JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G330720LXL04_029619JCVI_TKOH_0031066.361.029 / 99.412Complex
TkA07G330800LXL04_029623JCVI_TKOH_0031098.6100.0 / 100.0Complex
TkA07G330810LXL04_029624JCVI_TKOH_0031099.6100.0 / 100.0Complex
TkA07G330970LXL04_029626JCVI_TKOH_0031092.056.818 / 38.071Complex
TkA07G331080LXL04_029627JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G331280LXL04_029630JCVI_TKOH_00310100.0100.0 / 94.554Complex
TkA07G332310LXL04_029633JCVI_TKOH_0031092.699.564 / 70.597Complex
TkA07G332320LXL04_029634JCVI_TKOH_0031095.0100.0 / 85.56Strict
TkA07G332430LXL04_029637JCVI_TKOH_0031099.6100.0 / 100.0Strict
TkA07G332530LXL04_029638JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G332560LXL04_029639JCVI_TKOH_0031098.0100.0 / 59.172Review
TkA07G332660LXL04_029642JCVI_TKOH_0031099.6100.0 / 100.0Strict
TkA07G333040LXL04_029649JCVI_TKOH_0031098.7100.0 / 100.0Complex
TkA07G333070LXL04_029650JCVI_TKOH_0031098.589.597 / 46.597Review
TkA07G333080LXL04_029651JCVI_TKOH_0031099.7100.0 / 100.0Strict
TkA07G333090LXL04_029652JCVI_TKOH_0031099.8100.0 / 100.0Strict
TkA07G333930LXL04_029655JCVI_TKOH_0031099.3100.0 / 100.0Complex
TkA07G334850LXL04_029666JCVI_TKOH_0031098.8100.0 / 100.0Complex
TkA07G334970LXL04_029664JCVI_TKOH_0031097.9100.0 / 54.383Review
TkA07G335540LXL04_029678JCVI_TKOH_0031099.5100.0 / 100.0Complex
TkA07G335820LXL04_029681JCVI_TKOH_0031098.285.494 / 53.578Review
TkA07G335830LXL04_029681JCVI_TKOH_0031098.396.4 / 46.615Review
TkA07G335840LXL04_029682JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G336050LXL04_029684JCVI_TKOH_0031099.797.686 / 90.923Complex
TkA07G336230LXL04_029685JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G336400LXL04_029686JCVI_TKOH_0031099.8100.0 / 100.0Strict
TkA07G336580LXL04_029688JCVI_TKOH_0031096.4100.0 / 100.0Strict
TkA07G336610LXL04_029689JCVI_TKOH_0031099.5100.0 / 100.0Review
TkA07G336630LXL04_029690JCVI_TKOH_0031098.195.536 / 33.754Review
TkA07G336640LXL04_029689JCVI_TKOH_0031042.695.385 / 96.842Complex
TkA07G336800LXL04_029692JCVI_TKOH_00310100.079.147 / 100.0Complex
TkA07G336880LXL04_029694JCVI_TKOH_0031098.1100.0 / 85.847Strict
TkA07G336920LXL04_029695JCVI_TKOH_00310100.0100.0 / 84.848Review
TkA07G337210LXL04_029696JCVI_TKOH_00310100.0100.0 / 84.848Review
TkA07G337460LXL04_029697JCVI_TKOH_0031098.799.568 / 55.676Review
TkA07G337470LXL04_029698JCVI_TKOH_00310100.095.262 / 87.215Strict
TkA07G337490LXL04_029699JCVI_TKOH_0031094.4100.0 / 100.0Probable
TkA07G337570LXL04_029701JCVI_TKOH_0031093.3100.0 / 100.0Probable
TkA07G337580LXL04_029702JCVI_TKOH_0031079.7100.0 / 68.161Complex
TkA07G337730LXL04_029704JCVI_TKOH_0031092.6100.0 / 100.0Probable
TkA07G338190LXL04_029705JCVI_TKOH_0031099.392.73 / 83.457Complex
TkA07G338340LXL04_029705JCVI_TKOH_0031097.299.747 / 48.642Review
TkA07G338630LXL04_029708JCVI_TKOH_0031099.6100.0 / 69.429Complex
TkA07G339320LXL04_029709JCVI_TKOH_0031072.096.816 / 99.431Complex
TkA07G339460LXL04_029709JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G339650LXL04_029711JCVI_TKOH_0031089.2100.0 / 100.0Review
TkA07G340250LXL04_029716JCVI_TKOH_0031091.2100.0 / 100.0Probable
TkA07G340530LXL04_029717JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G340580LXL04_029718JCVI_TKOH_0031099.6100.0 / 100.0Strict
TkA07G340660LXL04_029720JCVI_TKOH_0031093.479.825 / 15.294Complex
TkA07G340670LXL04_029720JCVI_TKOH_0031063.752.358 / 28.235Review
TkA07G340780LXL04_029722JCVI_TKOH_0031063.4100.0 / 63.924Complex
TkA07G341140LXL04_029722JCVI_TKOH_0031067.899.781 / 97.679Complex
TkA07G341170LXL04_029722JCVI_TKOH_0031071.895.486 / 58.439Complex
TkA07G341190LXL04_029722JCVI_TKOH_0031099.8100.0 / 100.0Complex
TkA07G341880LXL04_029725JCVI_TKOH_0031099.6100.0 / 75.676Probable
TkA07G341890LXL04_029726JCVI_TKOH_0031093.8100.0 / 100.0Probable
TkA07G341950LXL04_029727JCVI_TKOH_0031099.7100.0 / 96.588Strict
TkA07G342140LXL04_029729JCVI_TKOH_0031098.7100.0 / 100.0Review
TkA07G342540LXL04_029739JCVI_TKOH_0031095.659.649 / 32.381Complex
TkA07G342580LXL04_029742JCVI_TKOH_0031082.944.625 / 5.428Complex
TkA07G342890LXL04_029744JCVI_TKOH_0031099.1100.0 / 100.0Strict
TkA07G342970LXL04_029745JCVI_TKOH_0031099.2100.0 / 100.0Strict
TkA07G342980LXL04_029746JCVI_TKOH_0031091.788.889 / 22.222Review
TkA07G343400LXL04_029748JCVI_TKOH_0031098.573.864 / 100.0Complex
TkA07G343440LXL04_029749JCVI_TKOH_0031099.6100.0 / 100.0Strict
TkA07G343450LXL04_029750JCVI_TKOH_0031098.4100.0 / 100.0Strict
TkA07G343460LXL04_029751JCVI_TKOH_0031098.4100.0 / 100.0Strict
TkA07G343810LXL04_029752JCVI_TKOH_0031098.9100.0 / 100.0Strict
TkA07G343830LXL04_029753JCVI_TKOH_0031087.9100.0 / 100.0Review
TkA07G343940LXL04_029756JCVI_TKOH_00310100.099.425 / 85.644Review
TkA07G345320LXL04_029762JCVI_TKOH_0031098.8100.0 / 57.483Review
TkA07G345820LXL04_029767JCVI_TKOH_0031099.6100.0 / 100.0Review
TkA07G345880LXL04_029769JCVI_TKOH_0031087.596.519 / 73.046Review
TkA07G345890LXL04_029768JCVI_TKOH_0031090.2100.0 / 100.0Probable
TkA07G345980LXL04_029771JCVI_TKOH_0031097.895.858 / 50.077Review
TkA07G346060LXL04_029772JCVI_TKOH_0031099.2100.0 / 100.0Strict
TkA07G346080LXL04_029773JCVI_TKOH_0031094.282.594 / 93.077Probable
TkA07G346090LXL04_029774JCVI_TKOH_0031095.0100.0 / 100.0Strict
TkA07G346470LXL04_029775JCVI_TKOH_00310100.0100.0 / 85.671Strict
TkA07G346550LXL04_029776JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G347100LXL04_029789JCVI_TKOH_0031099.1100.0 / 94.323Strict
TkA07G347660LXL04_029794JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G347850LXL04_029795JCVI_TKOH_0031099.2100.0 / 79.874Probable
TkA07G348150LXL04_029796JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G348300LXL04_029799JCVI_TKOH_0031084.9100.0 / 100.0Complex
TkA07G348740LXL04_029803JCVI_TKOH_0031090.998.268 / 99.583Probable
TkA07G348940LXL04_029808JCVI_TKOH_0031099.596.507 / 57.552Review
TkA07G348960LXL04_029810JCVI_TKOH_0031099.3100.0 / 100.0Strict
TkA07G348980LXL04_029811JCVI_TKOH_00310100.0100.0 / 27.415Review
TkA07G349480LXL04_029821JCVI_TKOH_0031077.849.541 / 29.67Review
TkA07G350260LXL04_029815JCVI_TKOH_0031098.774.286 / 43.094Review
TkA07G350350LXL04_029819JCVI_TKOH_00310100.031.544 / 33.571Review
TkA07G350610LXL04_029822JCVI_TKOH_00310100.097.581 / 36.778Review
TkA07G350620LXL04_029823JCVI_TKOH_0031097.798.721 / 79.098Probable
TkA07G350920LXL04_029828JCVI_TKOH_0031099.8100.0 / 100.0Strict
TkA07G351000LXL04_029829JCVI_TKOH_0031099.7100.0 / 100.0Strict
TkA07G351010LXL04_029830JCVI_TKOH_00310100.097.537 / 95.192Review
TkA07G351200LXL04_029832JCVI_TKOH_00310100.093.833 / 93.833Strict
TkA07G351210LXL04_029833JCVI_TKOH_0031097.4100.0 / 100.0Complex
TkA07G351220LXL04_029834JCVI_TKOH_00310100.094.841 / 94.841Complex
TkA07G351290LXL04_029833JCVI_TKOH_0031091.8100.0 / 100.0Complex
TkA07G351300LXL04_029834JCVI_TKOH_00310100.094.841 / 94.841Complex
TkA07G351890LXL04_029835JCVI_TKOH_0031098.0100.0 / 100.0Strict
TkA07G352140LXL04_029836JCVI_TKOH_0031099.7100.0 / 100.0Strict
TkA07G352270LXL04_029841JCVI_TKOH_00310100.0100.0 / 100.0Strict
TkA07G352350LXL04_029842JCVI_TKOH_0031096.575.676 / 74.603Probable
TkA07G352370LXL04_029843JCVI_TKOH_0031080.7100.0 / 100.0Review
TkA07G352490LXL04_029844JCVI_TKOH_0031087.070.261 / 31.525Complex
TkA07G352620LXL04_029844JCVI_TKOH_0031066.593.981 / 98.094Complex
TkA07G352760LXL04_029846JCVI_TKOH_0031099.6100.0 / 100.0Complex
TkA07G352910LXL04_029847JCVI_TKOH_0031098.1100.0 / 100.0Review
TkA07G353300LXL04_029848JCVI_TKOH_0031068.6100.0 / 100.0Complex
TkA07G353410LXL04_029848JCVI_TKOH_0031093.399.048 / 99.048Complex
TkA07G353500LXL04_029850JCVI_TKOH_0031098.8100.0 / 100.0Complex
TkA07G353520LXL04_029853JCVI_TKOH_0031093.599.872 / 95.594Complex
TkA07G353630LXL04_029853JCVI_TKOH_0031092.0100.0 / 95.838Complex
TkA07G354220LXL04_029855JCVI_TKOH_0031079.9100.0 / 42.95Complex
TkA07G354230LXL04_029855JCVI_TKOH_0031097.997.909 / 36.684Review
TkA07G354240LXL04_029855JCVI_TKOH_0031089.677.457 / 17.493Complex
TkA07G354320LXL04_029855JCVI_TKOH_0031097.695.406 / 81.332Complex
TkA07G354410LXL04_029859JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G354420LXL04_029860JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G354430LXL04_029861JCVI_TKOH_0031088.099.074 / 100.0Complex
TkA07G354440LXL04_029863JCVI_TKOH_0031097.7100.0 / 100.0Review
TkA07G354450LXL04_029864JCVI_TKOH_0031098.9100.0 / 100.0Complex
TkA07G354800LXL04_029865JCVI_TKOH_0031099.1100.0 / 100.0Complex
TkA07G354900LXL04_029867JCVI_TKOH_0031095.372.034 / 36.325Review
TkA07G354930LXL04_029868JCVI_TKOH_0031099.2100.0 / 44.403Review
TkA07G355060LXL04_029869JCVI_TKOH_00310100.0100.0 / 100.0Complex
TkA07G355120LXL04_029870JCVI_TKOH_0031096.399.725 / 96.219Complex
TkA07G355370LXL04_029871JCVI_TKOH_0031097.9100.0 / 100.0Review
TkA07G355390LXL04_029875JCVI_TKOH_0031081.4100.0 / 59.814Complex
TkA07G355400LXL04_029873JCVI_TKOH_0031099.4100.0 / 68.812Complex
TkA07G355460LXL04_029874JCVI_TKOH_0031096.2100.0 / 72.786Complex
TkA07G355480LXL04_029875JCVI_TKOH_0031099.1100.0 / 28.647Review
TkA07G355490LXL04_029875JCVI_TKOH_0031094.899.208 / 51.194Complex
TkA07G355540LXL04_029876JCVI_TKOH_0031098.4100.0 / 100.0Complex
TkA07G355550LXL04_029877JCVI_TKOH_0031099.2100.0 / 100.0Complex
TkA07G356060LXL04_029881JCVI_TKOH_0031097.499.336 / 88.322Complex
TkA07G356370LXL04_029884JCVI_TKOH_0031091.995.226 / 100.0Complex
TkA07G356400LXL04_029885JCVI_TKOH_0031099.098.734 / 64.463Complex
TkA07G356510LXL04_029886JCVI_TKOH_0031091.6100.0 / 100.0Complex
TkA07G356520LXL04_029887JCVI_TKOH_0031099.8100.0 / 100.0Complex
TkA07G356690LXL04_029889JCVI_TKOH_0031078.483.668 / 50.075Complex
TkA07G356750LXL04_029889JCVI_TKOH_0031099.192.683 / 51.274Review
TkA07G356810LXL04_029889JCVI_TKOH_0031095.092.355 / 45.127Review
TkA07G356960LXL04_029895JCVI_TKOH_0031097.841.441 / 38.983Review
TkA07G356990LXL04_029896JCVI_TKOH_0031098.2100.0 / 100.0Complex
TkA07G357060LXL04_029898JCVI_TKOH_0031098.2100.0 / 100.0Complex
TkA07G357070LXL04_029899JCVI_TKOH_0031095.4100.0 / 100.0Strict
TkA07G357080LXL04_029900JCVI_TKOH_0031097.3100.0 / 100.0Complex
TkA07G357090LXL04_029901JCVI_TKOH_0031098.2100.0 / 100.0Complex
TkA07G357110LXL04_029902JCVI_TKOH_0031089.999.738 / 88.662Complex
TkA07G357470LXL04_029905JCVI_TKOH_0031099.8100.0 / 100.0Complex
TkA07G357480LXL04_029906JCVI_TKOH_0031099.8100.0 / 100.0Review
TkA07G357490LXL04_029907JCVI_TKOH_0031099.5100.0 / 100.0Complex
TkA07G357510LXL04_029908JCVI_TKOH_0031099.598.25 / 99.118Complex
TkA07G358370LXL04_029900JCVI_TKOH_0031097.3100.0 / 100.0Complex
TkA07G358380LXL04_029901JCVI_TKOH_0031098.694.476 / 100.0Complex
TkA07G358390LXL04_029902JCVI_TKOH_0031089.499.738 / 88.662Complex
TkA07G358650LXL04_029905JCVI_TKOH_0031099.1100.0 / 100.0Complex
TkA07G358660LXL04_029906JCVI_TKOH_0031099.8100.0 / 100.0Complex
TkA07G358670LXL04_029907JCVI_TKOH_0031098.9100.0 / 100.0Complex
TkA07G358770LXL04_029908JCVI_TKOH_0031099.799.249 / 100.0Complex
TkA07G358900LXL04_029909JCVI_TKOH_0031087.7100.0 / 96.447Review
TkA07G359060LXL04_029911JCVI_TKOH_00310100.099.269 / 84.977Strict
TkA07G359220LXL04_029913JCVI_TKOH_0031096.294.393 / 91.014Review
TkA07G359370LXL04_029916JCVI_TKOH_0031098.7100.0 / 100.0Strict
TkA07G359380LXL04_029917JCVI_TKOH_0031099.6100.0 / 100.0Complex
TkA07G359410LXL04_029918JCVI_TKOH_0031098.9100.0 / 46.897Review