Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00241

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 129

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00241

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00241 Chr05 83288475-90198651 Chr04 117143423-124171330 mixed High 129 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00241`	Chr05:83288475-90198651	Chr04:117143423-124171330	mixed	129	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 129 · Showing 1–129 · Page 1/1

Download All Anchors TSV

TkA05G336960 → LXL04_020985

97.7%

TkA05G336990 → LXL04_020984

99.9%

TkA05G337000 → LXL04_020983

100.0%

TkA05G337580 → LXL04_020982

98.0%

TkA05G337600 → LXL04_020981

98.2%

TkA05G337620 → LXL04_020980

99.4%

TkA05G337660 → LXL04_020979

100.0%

TkA05G337890 → LXL04_020991

98.9%

TkA05G338900 → LXL04_020995

84.7%

TkA05G339360 → LXL04_020997

97.5%

TkA05G339780 → LXL04_020998

100.0%

TkA05G339790 → LXL04_020999

92.3%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA05G336960`	`LXL04_020985`	`JCVI_TKOH_00241`	97.7	100.0 / 100.0	Strict
`TkA05G336990`	`LXL04_020984`	`JCVI_TKOH_00241`	99.9	100.0 / 100.0	Strict
`TkA05G337000`	`LXL04_020983`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G337580`	`LXL04_020982`	`JCVI_TKOH_00241`	98.0	100.0 / 35.172	Review
`TkA05G337600`	`LXL04_020981`	`JCVI_TKOH_00241`	98.2	62.778 / 88.976	Review
`TkA05G337620`	`LXL04_020980`	`JCVI_TKOH_00241`	99.4	100.0 / 88.597	Strict
`TkA05G337660`	`LXL04_020979`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G337890`	`LXL04_020991`	`JCVI_TKOH_00241`	98.9	100.0 / 100.0	Strict
`TkA05G338900`	`LXL04_020995`	`JCVI_TKOH_00241`	84.7	100.0 / 94.304	Complex
`TkA05G339360`	`LXL04_020997`	`JCVI_TKOH_00241`	97.5	100.0 / 100.0	Complex
`TkA05G339780`	`LXL04_020998`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Complex
`TkA05G339790`	`LXL04_020999`	`JCVI_TKOH_00241`	92.3	69.643 / 78.0	Review
`TkA05G339870`	`LXL04_021000`	`JCVI_TKOH_00241`	99.3	100.0 / 100.0	Strict
`TkA05G340150`	`LXL04_021009`	`JCVI_TKOH_00241`	98.8	100.0 / 100.0	Strict
`TkA05G340170`	`LXL04_021010`	`JCVI_TKOH_00241`	97.7	99.718 / 61.005	Complex
`TkA05G340300`	`LXL04_021011`	`JCVI_TKOH_00241`	90.8	96.748 / 46.304	Complex
`TkA05G341710`	`LXL04_021013`	`JCVI_TKOH_00241`	77.7	100.0 / 90.833	Review
`TkA05G341940`	`LXL04_021014`	`JCVI_TKOH_00241`	99.7	100.0 / 100.0	Strict
`TkA05G342670`	`LXL04_021015`	`JCVI_TKOH_00241`	99.1	53.883 / 100.0	Review
`TkA05G342690`	`LXL04_021017`	`JCVI_TKOH_00241`	98.8	94.866 / 73.024	Complex
`TkA05G342820`	`LXL04_021021`	`JCVI_TKOH_00241`	98.6	100.0 / 100.0	Complex
`TkA05G342930`	`LXL04_021023`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G343150`	`LXL04_021024`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G343160`	`LXL04_021025`	`JCVI_TKOH_00241`	99.5	98.922 / 82.844	Strict
`TkA05G343500`	`LXL04_021028`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G343590`	`LXL04_021032`	`JCVI_TKOH_00241`	87.4	100.0 / 99.542	Review
`TkA05G343730`	`LXL04_021034`	`JCVI_TKOH_00241`	88.1	100.0 / 100.0	Complex
`TkA05G344190`	`LXL04_021036`	`JCVI_TKOH_00241`	83.7	100.0 / 100.0	Review
`TkA05G344270`	`LXL04_021037`	`JCVI_TKOH_00241`	97.9	100.0 / 100.0	Strict
`TkA05G344410`	`LXL04_021039`	`JCVI_TKOH_00241`	86.1	100.0 / 100.0	Review
`TkA05G345000`	`LXL04_021040`	`JCVI_TKOH_00241`	89.3	100.0 / 100.0	Complex
`TkA05G345150`	`LXL04_021041`	`JCVI_TKOH_00241`	99.3	100.0 / 100.0	Strict
`TkA05G345160`	`LXL04_021042`	`JCVI_TKOH_00241`	90.5	100.0 / 100.0	Probable
`TkA05G345230`	`LXL04_021044`	`JCVI_TKOH_00241`	66.4	100.0 / 100.0	Review
`TkA05G345800`	`LXL04_021049`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Review
`TkA05G345860`	`LXL04_021050`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G346410`	`LXL04_021051`	`JCVI_TKOH_00241`	99.4	100.0 / 100.0	Strict
`TkA05G346420`	`LXL04_021052`	`JCVI_TKOH_00241`	93.3	100.0 / 100.0	Complex
`TkA05G346460`	`LXL04_021053`	`JCVI_TKOH_00241`	99.1	100.0 / 100.0	Complex
`TkA05G346530`	`LXL04_021053`	`JCVI_TKOH_00241`	82.6	100.0 / 100.0	Complex
`TkA05G347020`	`LXL04_021054`	`JCVI_TKOH_00241`	98.9	100.0 / 100.0	Strict
`TkA05G347360`	`LXL04_021056`	`JCVI_TKOH_00241`	87.6	100.0 / 42.522	Complex
`TkA05G347550`	`LXL04_021054`	`JCVI_TKOH_00241`	99.2	99.588 / 39.032	Review
`TkA05G347700`	`LXL04_021056`	`JCVI_TKOH_00241`	89.0	100.0 / 42.522	Review
`TkA05G347990`	`LXL04_021057`	`JCVI_TKOH_00241`	99.2	93.75 / 90.385	Complex
`TkA05G349230`	`LXL04_021061`	`JCVI_TKOH_00241`	87.5	100.0 / 100.0	Complex
`TkA05G349270`	`LXL04_021063`	`JCVI_TKOH_00241`	99.5	100.0 / 100.0	Strict
`TkA05G349440`	`LXL04_021066`	`JCVI_TKOH_00241`	99.6	100.0 / 100.0	Complex
`TkA05G350270`	`LXL04_021069`	`JCVI_TKOH_00241`	98.4	100.0 / 100.0	Strict
`TkA05G350330`	`LXL04_021070`	`JCVI_TKOH_00241`	99.3	100.0 / 100.0	Strict
`TkA05G350370`	`LXL04_021072`	`JCVI_TKOH_00241`	90.9	100.0 / 100.0	Probable
`TkA05G350380`	`LXL04_021073`	`JCVI_TKOH_00241`	93.2	98.817 / 48.229	Complex
`TkA05G350390`	`LXL04_021073`	`JCVI_TKOH_00241`	98.3	100.0 / 48.229	Review
`TkA05G350460`	`LXL04_021074`	`JCVI_TKOH_00241`	99.4	99.394 / 24.886	Review
`TkA05G350470`	`LXL04_021074`	`JCVI_TKOH_00241`	77.2	99.192 / 73.596	Review
`TkA05G351190`	`LXL04_021076`	`JCVI_TKOH_00241`	98.9	100.0 / 100.0	Strict
`TkA05G351770`	`LXL04_021079`	`JCVI_TKOH_00241`	99.7	97.647 / 99.104	Complex
`TkA05G352140`	`LXL04_021081`	`JCVI_TKOH_00241`	100.0	94.776 / 50.8	Review
`TkA05G352180`	`LXL04_021082`	`JCVI_TKOH_00241`	99.6	100.0 / 100.0	Strict
`TkA05G352200`	`LXL04_021083`	`JCVI_TKOH_00241`	99.7	100.0 / 81.448	Strict
`TkA05G352480`	`LXL04_021084`	`JCVI_TKOH_00241`	98.8	97.9 / 92.19	Strict
`TkA05G352850`	`LXL04_021085`	`JCVI_TKOH_00241`	95.2	97.917 / 12.559	Review
`TkA05G352950`	`LXL04_021086`	`JCVI_TKOH_00241`	97.7	89.916 / 67.296	Complex
`TkA05G353050`	`LXL04_021090`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Review
`TkA05G353250`	`LXL04_021091`	`JCVI_TKOH_00241`	96.9	100.0 / 100.0	Review
`TkA05G353380`	`LXL04_021091`	`JCVI_TKOH_00241`	99.4	100.0 / 100.0	Review
`TkA05G353450`	`LXL04_021089`	`JCVI_TKOH_00241`	85.0	97.938 / 96.024	Review
`TkA05G353470`	`LXL04_021090`	`JCVI_TKOH_00241`	90.1	100.0 / 100.0	Complex
`TkA05G353920`	`LXL04_021095`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G353930`	`LXL04_021096`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Complex
`TkA05G353940`	`LXL04_021097`	`JCVI_TKOH_00241`	96.4	95.169 / 92.488	Complex
`TkA05G354230`	`LXL04_021099`	`JCVI_TKOH_00241`	99.2	100.0 / 100.0	Strict
`TkA05G354330`	`LXL04_021101`	`JCVI_TKOH_00241`	83.1	98.718 / 67.105	Review
`TkA05G354340`	`LXL04_021102`	`JCVI_TKOH_00241`	96.0	7.788 / 4.181	Complex
`TkA05G354480`	`LXL04_021107`	`JCVI_TKOH_00241`	45.0	80.921 / 11.445	Complex
`TkA05G354510`	`LXL04_021106`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G354560`	`LXL04_021107`	`JCVI_TKOH_00241`	94.1	100.0 / 86.466	Complex
`TkA05G354580`	`LXL04_021109`	`JCVI_TKOH_00241`	94.8	99.423 / 98.664	Review
`TkA05G354680`	`LXL04_021110`	`JCVI_TKOH_00241`	57.2	87.791 / 91.034	Complex
`TkA05G354700`	`LXL04_021110`	`JCVI_TKOH_00241`	80.8	100.0 / 100.0	Complex
`TkA05G355140`	`LXL04_021107`	`JCVI_TKOH_00241`	65.9	99.615 / 86.383	Complex
`TkA05G355220`	`LXL04_021115`	`JCVI_TKOH_00241`	94.8	100.0 / 100.0	Probable
`TkA05G355260`	`LXL04_021116`	`JCVI_TKOH_00241`	98.2	88.224 / 100.0	Complex
`TkA05G355350`	`LXL04_021118`	`JCVI_TKOH_00241`	99.1	100.0 / 100.0	Strict
`TkA05G355380`	`LXL04_021120`	`JCVI_TKOH_00241`	98.8	100.0 / 72.355	Probable
`TkA05G355520`	`LXL04_021122`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G355610`	`LXL04_021126`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Review
`TkA05G355620`	`LXL04_021127`	`JCVI_TKOH_00241`	98.0	100.0 / 98.844	Strict
`TkA05G355760`	`LXL04_021135`	`JCVI_TKOH_00241`	76.9	99.487 / 31.03	Complex
`TkA05G355780`	`LXL04_021136`	`JCVI_TKOH_00241`	91.2	81.172 / 94.344	Probable
`TkA05G355790`	`LXL04_021138`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G355800`	`LXL04_021139`	`JCVI_TKOH_00241`	97.0	99.896 / 94.406	Strict
`TkA05G356020`	`LXL04_021141`	`JCVI_TKOH_00241`	99.0	100.0 / 100.0	Strict
`TkA05G356630`	`LXL04_021142`	`JCVI_TKOH_00241`	93.3	100.0 / 100.0	Complex
`TkA05G356740`	`LXL04_021144`	`JCVI_TKOH_00241`	98.4	53.782 / 14.318	Complex
`TkA05G357400`	`LXL04_021142`	`JCVI_TKOH_00241`	82.1	94.273 / 52.106	Complex
`TkA05G357620`	`LXL04_021147`	`JCVI_TKOH_00241`	97.1	90.351 / 19.508	Review
`TkA05G357730`	`LXL04_021147`	`JCVI_TKOH_00241`	99.4	100.0 / 100.0	Review
`TkA05G357910`	`LXL04_021150`	`JCVI_TKOH_00241`	97.4	100.0 / 74.502	Probable
`TkA05G357930`	`LXL04_021151`	`JCVI_TKOH_00241`	100.0	100.0 / 75.285	Complex
`TkA05G358130`	`LXL04_021152`	`JCVI_TKOH_00241`	98.2	100.0 / 100.0	Strict
`TkA05G358150`	`LXL04_021153`	`JCVI_TKOH_00241`	85.8	99.526 / 99.038	Review
`TkA05G358170`	`LXL04_021155`	`JCVI_TKOH_00241`	69.6	52.985 / 30.178	Complex
`TkA05G358380`	`LXL04_021156`	`JCVI_TKOH_00241`	96.7	100.0 / 100.0	Complex
`TkA05G358620`	`LXL04_021157`	`JCVI_TKOH_00241`	99.2	100.0 / 99.501	Complex
`TkA05G358630`	`LXL04_021158`	`JCVI_TKOH_00241`	97.1	100.0 / 89.463	Strict
`TkA05G358650`	`LXL04_021159`	`JCVI_TKOH_00241`	52.6	95.443 / 50.797	Complex
`TkA05G358700`	`LXL04_021159`	`JCVI_TKOH_00241`	98.5	100.0 / 48.884	Review
`TkA05G358710`	`LXL04_021160`	`JCVI_TKOH_00241`	92.9	100.0 / 100.0	Probable
`TkA05G358910`	`LXL04_021161`	`JCVI_TKOH_00241`	96.6	100.0 / 100.0	Strict
`TkA05G358970`	`LXL04_021163`	`JCVI_TKOH_00241`	98.2	100.0 / 100.0	Strict
`TkA05G359200`	`LXL04_021164`	`JCVI_TKOH_00241`	75.3	69.939 / 65.766	Complex
`TkA05G359440`	`LXL04_021165`	`JCVI_TKOH_00241`	100.0	100.0 / 93.262	Strict
`TkA05G359570`	`LXL04_021167`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G360320`	`LXL04_021168`	`JCVI_TKOH_00241`	94.3	100.0 / 100.0	Probable
`TkA05G360380`	`LXL04_021169`	`JCVI_TKOH_00241`	99.3	99.929 / 97.568	Strict
`TkA05G360400`	`LXL04_021170`	`JCVI_TKOH_00241`	99.8	100.0 / 100.0	Strict
`TkA05G360510`	`LXL04_021172`	`JCVI_TKOH_00241`	99.4	100.0 / 100.0	Strict
`TkA05G360840`	`LXL04_021173`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Review
`TkA05G361950`	`LXL04_021182`	`JCVI_TKOH_00241`	100.0	66.234 / 32.381	Complex
`TkA05G362010`	`LXL04_021182`	`JCVI_TKOH_00241`	61.9	81.413 / 71.429	Complex
`TkA05G362060`	`LXL04_021183`	`JCVI_TKOH_00241`	96.7	100.0 / 100.0	Strict
`TkA05G362550`	`LXL04_021189`	`JCVI_TKOH_00241`	99.6	100.0 / 93.131	Strict
`TkA05G362570`	`LXL04_021190`	`JCVI_TKOH_00241`	98.7	100.0 / 100.0	Strict
`TkA05G363020`	`LXL04_021191`	`JCVI_TKOH_00241`	100.0	100.0 / 100.0	Strict
`TkA05G363190`	`LXL04_021194`	`JCVI_TKOH_00241`	71.6	99.01 / 52.688	Complex
`TkA05G363260`	`LXL04_021194`	`JCVI_TKOH_00241`	100.0	98.995 / 52.957	Review
`TkA05G363270`	`LXL04_021194`	`JCVI_TKOH_00241`	97.7	100.0 / 47.043	Review
`TkA05G363360`	`LXL04_021195`	`JCVI_TKOH_00241`	90.2	95.082 / 95.337	Probable