Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
MaterialAssemblyGenesGap runsTelomere scan
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

Query Interpretation

Input ID
JCVI_TKOH_00350
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 587
crosswalk / blocks / anchors
Best block: JCVI_TKOH_00350

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00350 Chr08 47179108-67021829 Chr07 23822747-42607422 mixed High 200 anchors
Chr08 47179108-67021829 Chr07 23822747-42607422 JCVI_TKOH_00350 · 587 gene pairs TkA08G204810 | LXL04_032787 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA08G204820 | LXL04_032788 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA08G204830 | LXL04_032789 | 100.0% | multi_source_to_OH1004 | Complex TkA08G204990 | LXL04_032791 | 99.3% | sequence_supported_annotation_or_model_conflict | Review TkA08G205000 | LXL04_032792 | 100.0% | multi_source_to_OH1004 | Complex TkA08G205040 | LXL04_032793 | 99.9% | RBH_high_identity_coverage_synteny | Strict TkA08G205070 | LXL04_032797 | 73.2% | non_reciprocal_best_hit | Complex TkA08G205140 | LXL04_032797 | 97.1% | sequence_supported_annotation_or_model_conflict | Review TkA08G205220 | LXL04_032797 | 99.6% | sequence_supported_annotation_or_model_conflict | Review TkA08G205390 | LXL04_032799 | 97.1% | multi_candidate_from_TK1151 | Complex TkA08G205430 | LXL04_032800 | 99.8% | multi_source_to_OH1004 | Complex TkA08G205920 | LXL04_032803 | 99.7% | RBH_high_identity_coverage_synteny | Strict
High Medium Other Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

BlockQuery locationTarget locationOrientationCurrent mapped anchorsConfidenceNote
JCVI_TKOH_00350 Chr08:47179108-67021829 Chr07:23822747-42607422 mixed 587 High Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 587 · Showing 201–400 · Page 2/3

TkA08G204810 → LXL04_032787
100.0%
TkA08G204820 → LXL04_032788
99.7%
TkA08G204830 → LXL04_032789
100.0%
TkA08G204990 → LXL04_032791
99.3%
TkA08G205000 → LXL04_032792
100.0%
TkA08G205040 → LXL04_032793
99.9%
TkA08G205070 → LXL04_032797
73.2%
TkA08G205140 → LXL04_032797
97.1%
TkA08G205220 → LXL04_032797
99.6%
TkA08G205390 → LXL04_032799
97.1%
TkA08G205430 → LXL04_032800
99.8%
TkA08G205920 → LXL04_032803
99.7%
TK1151 geneOH-1004 geneBlockIdentityCoverageConfidence
TkA08G204810LXL04_032787JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G204820LXL04_032788JCVI_TKOH_0035099.797.284 / 98.01Strict
TkA08G204830LXL04_032789JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G204990LXL04_032791JCVI_TKOH_0035099.3100.0 / 58.203Review
TkA08G205000LXL04_032792JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G205040LXL04_032793JCVI_TKOH_0035099.998.67 / 100.0Strict
TkA08G205070LXL04_032797JCVI_TKOH_0035073.238.981 / 15.868Complex
TkA08G205140LXL04_032797JCVI_TKOH_0035097.1100.0 / 16.766Review
TkA08G205220LXL04_032797JCVI_TKOH_0035099.6100.0 / 50.0Review
TkA08G205390LXL04_032799JCVI_TKOH_0035097.199.031 / 75.507Complex
TkA08G205430LXL04_032800JCVI_TKOH_0035099.8100.0 / 100.0Complex
TkA08G205920LXL04_032803JCVI_TKOH_0035099.7100.0 / 100.0Strict
TkA08G205950LXL04_032804JCVI_TKOH_0035083.8100.0 / 69.231Complex
TkA08G206060LXL04_032805JCVI_TKOH_0035099.199.559 / 89.683Complex
TkA08G206150LXL04_032806JCVI_TKOH_0035099.397.942 / 90.205Strict
TkA08G206180LXL04_032808JCVI_TKOH_0035098.8100.0 / 100.0Review
TkA08G206190LXL04_032809JCVI_TKOH_0035088.1100.0 / 100.0Review
TkA08G206200LXL04_032810JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G206410LXL04_032812JCVI_TKOH_0035082.986.885 / 63.953Review
TkA08G206450LXL04_032813JCVI_TKOH_00350100.098.839 / 64.795Complex
TkA08G206520LXL04_032815JCVI_TKOH_00350100.053.383 / 97.931Review
TkA08G206530LXL04_032816JCVI_TKOH_0035099.8100.0 / 100.0Strict
TkA08G206780LXL04_032818JCVI_TKOH_0035099.999.86 / 69.434Review
TkA08G206810LXL04_032819JCVI_TKOH_0035096.2100.0 / 71.841Complex
TkA08G206950LXL04_032820JCVI_TKOH_0035096.8100.0 / 100.0Complex
TkA08G207260LXL04_032821JCVI_TKOH_0035099.7100.0 / 100.0Complex
TkA08G207270LXL04_032822JCVI_TKOH_0035071.9100.0 / 89.655Complex
TkA08G207300LXL04_032823JCVI_TKOH_00350100.0100.0 / 62.727Review
TkA08G207330LXL04_032824JCVI_TKOH_0035093.7100.0 / 80.252Complex
TkA08G207830LXL04_032828JCVI_TKOH_0035098.6100.0 / 100.0Review
TkA08G207840LXL04_032829JCVI_TKOH_0035087.9100.0 / 100.0Complex
TkA08G207910LXL04_032830JCVI_TKOH_00350100.0100.0 / 100.0Review
TkA08G208120LXL04_032831JCVI_TKOH_0035099.699.13 / 94.606Complex
TkA08G208180LXL04_032834JCVI_TKOH_0035094.895.489 / 92.708Complex
TkA08G208480LXL04_032836JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G208650LXL04_032840JCVI_TKOH_0035088.5100.0 / 77.215Review
TkA08G208660LXL04_032841JCVI_TKOH_0035098.498.805 / 60.488Review
TkA08G208670LXL04_032842JCVI_TKOH_0035097.3100.0 / 100.0Review
TkA08G208680LXL04_032855JCVI_TKOH_0035080.398.734 / 86.667Complex
TkA08G208830LXL04_032855JCVI_TKOH_0035080.799.63 / 99.63Complex
TkA08G208950LXL04_032843JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G208960LXL04_032854JCVI_TKOH_0035067.8100.0 / 96.667Complex
TkA08G209130LXL04_032854JCVI_TKOH_0035074.599.535 / 94.444Complex
TkA08G209250LXL04_032850JCVI_TKOH_0035061.2100.0 / 56.291Review
TkA08G209260LXL04_032851JCVI_TKOH_0035098.9100.0 / 100.0Strict
TkA08G209600LXL04_032855JCVI_TKOH_0035099.3100.0 / 100.0Complex
TkA08G209690LXL04_032856JCVI_TKOH_0035091.793.37 / 86.889Probable
TkA08G209790LXL04_032858JCVI_TKOH_0035087.395.2 / 99.716Complex
TkA08G209800LXL04_032859JCVI_TKOH_00350100.0100.0 / 98.068Strict
TkA08G209890LXL04_032863JCVI_TKOH_0035062.995.567 / 49.1Review
TkA08G209940LXL04_032864JCVI_TKOH_0035077.395.968 / 69.11Complex
TkA08G210190LXL04_032869JCVI_TKOH_0035087.190.604 / 76.44Complex
TkA08G210310LXL04_032871JCVI_TKOH_0035097.3100.0 / 100.0Strict
TkA08G210710LXL04_032875JCVI_TKOH_0035099.2100.0 / 100.0Strict
TkA08G210750LXL04_032877JCVI_TKOH_0035099.399.408 / 95.781Strict
TkA08G210760LXL04_032878JCVI_TKOH_0035097.699.633 / 98.807Strict
TkA08G210770LXL04_032879JCVI_TKOH_0035096.6100.0 / 100.0Strict
TkA08G210850LXL04_032881JCVI_TKOH_0035099.4100.0 / 100.0Complex
TkA08G211130LXL04_032885JCVI_TKOH_0035047.279.459 / 23.726Complex
TkA08G211170LXL04_032885JCVI_TKOH_0035073.799.284 / 44.883Complex
TkA08G211260LXL04_032885JCVI_TKOH_0035083.787.045 / 10.922Complex
TkA08G211300LXL04_032886JCVI_TKOH_0035097.8100.0 / 100.0Strict
TkA08G211420LXL04_032887JCVI_TKOH_0035089.7100.0 / 100.0Complex
TkA08G211430LXL04_032889JCVI_TKOH_0035099.7100.0 / 100.0Complex
TkA08G211900LXL04_032890JCVI_TKOH_0035099.799.464 / 100.0Complex
TkA08G211970LXL04_032892JCVI_TKOH_0035099.0100.0 / 48.93Review
TkA08G211980LXL04_032892JCVI_TKOH_0035099.0100.0 / 50.765Review
TkA08G212010LXL04_032893JCVI_TKOH_0035097.0100.0 / 100.0Strict
TkA08G212110LXL04_032894JCVI_TKOH_00350100.097.525 / 51.436Review
TkA08G212390LXL04_032896JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G212420LXL04_032897JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G212480LXL04_032899JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G212490LXL04_032900JCVI_TKOH_0035097.889.216 / 100.0Strict
TkA08G212530LXL04_032901JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G212880LXL04_032903JCVI_TKOH_0035099.198.667 / 90.722Review
TkA08G212890LXL04_032904JCVI_TKOH_0035099.0100.0 / 76.277Review
TkA08G212920LXL04_032905JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G212930LXL04_032906JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G212950LXL04_032907JCVI_TKOH_0035099.4100.0 / 100.0Strict
TkA08G213100LXL04_032909JCVI_TKOH_0035099.698.077 / 28.115Review
TkA08G213110LXL04_032910JCVI_TKOH_0035096.6100.0 / 100.0Strict
TkA08G213120LXL04_032911JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G213130LXL04_032912JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G213150LXL04_032915JCVI_TKOH_00350100.0100.0 / 83.571Complex
TkA08G213200LXL04_032916JCVI_TKOH_0035092.997.03 / 17.235Complex
TkA08G213210LXL04_032916JCVI_TKOH_00350100.0100.0 / 23.295Review
TkA08G213290LXL04_032920JCVI_TKOH_0035098.2100.0 / 34.609Review
TkA08G213300LXL04_032918JCVI_TKOH_00350100.0100.0 / 100.0Review
TkA08G213520LXL04_032921JCVI_TKOH_00350100.0100.0 / 57.484Review
TkA08G213600LXL04_032922JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G213630LXL04_032923JCVI_TKOH_0035051.4100.0 / 83.128Review
TkA08G214080LXL04_032925JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G214190LXL04_032926JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G214220LXL04_032927JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G214370LXL04_032928JCVI_TKOH_0035099.7100.0 / 82.609Complex
TkA08G214470LXL04_032930JCVI_TKOH_0035099.3100.0 / 92.683Complex
TkA08G214490LXL04_032932JCVI_TKOH_00350100.094.472 / 87.037Strict
TkA08G214520LXL04_032936JCVI_TKOH_0035098.7100.0 / 100.0Strict
TkA08G214850LXL04_032937JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G215040LXL04_032939JCVI_TKOH_0035087.4100.0 / 100.0Review
TkA08G215070LXL04_032941JCVI_TKOH_00350100.0100.0 / 100.0Complex
TkA08G215210LXL04_032942JCVI_TKOH_00350100.049.18 / 23.166Complex
TkA08G215220LXL04_032943JCVI_TKOH_0035096.7100.0 / 100.0Strict
TkA08G215390LXL04_032945JCVI_TKOH_0035079.5100.0 / 100.0Complex
TkA08G215400LXL04_032945JCVI_TKOH_0035099.2100.0 / 100.0Review
TkA08G215540LXL04_032946JCVI_TKOH_0035098.2100.0 / 100.0Review
TkA08G215600LXL04_032947JCVI_TKOH_0035036.476.963 / 57.563Complex
TkA08G215610LXL04_032948JCVI_TKOH_0035096.8100.0 / 100.0Strict
TkA08G215690LXL04_032951JCVI_TKOH_0035095.8100.0 / 100.0Strict
TkA08G215860LXL04_032953JCVI_TKOH_0035097.0100.0 / 100.0Strict
TkA08G215950LXL04_032955JCVI_TKOH_0035087.381.405 / 83.302Review
TkA08G216000LXL04_032957JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G216060LXL04_032959JCVI_TKOH_0035097.4100.0 / 100.0Strict
TkA08G216400LXL04_032961JCVI_TKOH_0035097.599.281 / 53.089Review
TkA08G216410LXL04_032962JCVI_TKOH_0035097.684.828 / 96.85Complex
TkA08G216890LXL04_032964JCVI_TKOH_0035098.6100.0 / 81.111Strict
TkA08G216920LXL04_032965JCVI_TKOH_0035068.467.47 / 30.099Complex
TkA08G216970LXL04_032966JCVI_TKOH_0035099.6100.0 / 100.0Strict
TkA08G217090LXL04_032969JCVI_TKOH_0035096.688.258 / 28.174Review
TkA08G217130LXL04_032970JCVI_TKOH_0035099.795.114 / 47.021Review
TkA08G217180LXL04_032971JCVI_TKOH_0035097.695.93 / 84.833Complex
TkA08G217310LXL04_032978JCVI_TKOH_0035097.9100.0 / 100.0Strict
TkA08G217320LXL04_032979JCVI_TKOH_0035082.099.405 / 89.455Complex
TkA08G217430LXL04_032979JCVI_TKOH_0035099.097.642 / 37.636Review
TkA08G217530LXL04_032980JCVI_TKOH_0035098.854.795 / 89.888Review
TkA08G217610LXL04_032981JCVI_TKOH_0035099.6100.0 / 100.0Complex
TkA08G218060LXL04_032981JCVI_TKOH_0035051.088.798 / 88.283Complex
TkA08G218250LXL04_032981JCVI_TKOH_0035059.035.616 / 15.758Complex
TkA08G218270LXL04_032983JCVI_TKOH_0035099.1100.0 / 92.952Review
TkA08G218290LXL04_032985JCVI_TKOH_0035099.3100.0 / 100.0Strict
TkA08G218310LXL04_032986JCVI_TKOH_00350100.0100.0 / 83.333Strict
TkA08G218540LXL04_032988JCVI_TKOH_0035095.3100.0 / 95.848Complex
TkA08G218560LXL04_032989JCVI_TKOH_0035098.7100.0 / 100.0Strict
TkA08G218600LXL04_032992JCVI_TKOH_0035099.4100.0 / 91.795Review
TkA08G218720LXL04_032993JCVI_TKOH_0035099.376.562 / 99.324Review
TkA08G219150LXL04_032992JCVI_TKOH_0035051.571.658 / 66.667Complex
TkA08G219160LXL04_032996JCVI_TKOH_0035098.799.563 / 98.528Strict
TkA08G219320LXL04_032998JCVI_TKOH_0035098.2100.0 / 100.0Strict
TkA08G219600LXL04_032999JCVI_TKOH_0035099.192.623 / 90.4Review
TkA08G219690LXL04_033000JCVI_TKOH_0035094.796.203 / 44.838Review
TkA08G219950LXL04_033003JCVI_TKOH_0035098.6100.0 / 52.581Review
TkA08G220280LXL04_033005JCVI_TKOH_0035094.0100.0 / 100.0Probable
TkA08G220290LXL04_033006JCVI_TKOH_0035080.982.143 / 78.729Complex
TkA08G220320LXL04_033007JCVI_TKOH_0035099.199.329 / 91.358Strict
TkA08G220730LXL04_033010JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G220830LXL04_033011JCVI_TKOH_0035098.9100.0 / 100.0Strict
TkA08G220870LXL04_033013JCVI_TKOH_0035099.2100.0 / 38.746Review
TkA08G220920LXL04_033014JCVI_TKOH_0035098.391.159 / 91.185Complex
TkA08G220940LXL04_033016JCVI_TKOH_0035099.8100.0 / 98.525Complex
TkA08G221700LXL04_033020JCVI_TKOH_00350100.093.896 / 100.0Complex
TkA08G223160LXL04_033020JCVI_TKOH_0035097.456.296 / 29.063Complex
TkA08G223250LXL04_033022JCVI_TKOH_0035099.899.046 / 99.808Review
TkA08G223760LXL04_033024JCVI_TKOH_00350100.0100.0 / 100.0Review
TkA08G223870LXL04_033027JCVI_TKOH_00350100.0100.0 / 100.0Strict
TkA08G224660LXL04_033029JCVI_TKOH_0035094.669.156 / 23.205Complex
TkA08G225030LXL04_033030JCVI_TKOH_00350100.0100.0 / 100.0Review
TkA08G225100LXL04_033030JCVI_TKOH_0035099.6100.0 / 100.0Complex
TkA08G225420LXL04_033032JCVI_TKOH_00350100.0100.0 / 100.0Review
TkA08G226620LXL04_033038JCVI_TKOH_0035099.2100.0 / 100.0Review
TkA08G227000LXL04_033038JCVI_TKOH_0035099.2100.0 / 100.0Review
TkA08G227020LXL04_033039JCVI_TKOH_0035092.543.478 / 58.586Review
TkA08G227190LXL04_033042JCVI_TKOH_0035095.099.844 / 99.852Complex
TkA08G227370LXL04_033046JCVI_TKOH_00350100.0100.0 / 100.0Review
TkA08G227410LXL04_033047JCVI_TKOH_0035098.5100.0 / 100.0Strict
TkA08G227440LXL04_033048JCVI_TKOH_0035099.8100.0 / 100.0Complex
TkA08G227720LXL04_033050JCVI_TKOH_0035089.2100.0 / 100.0Review
TkA08G227740LXL04_033051JCVI_TKOH_0035097.195.25 / 99.738Strict
TkA08G227830LXL04_033052JCVI_TKOH_0035096.2100.0 / 100.0Strict
TkA08G228030LXL04_033057JCVI_TKOH_0035098.5100.0 / 52.435Review
TkA08G228060LXL04_033059JCVI_TKOH_0035092.5100.0 / 100.0Complex
TkA08G228280LXL04_033063JCVI_TKOH_0035099.792.012 / 74.94Complex
TkA08G228470LXL04_033066JCVI_TKOH_0035097.8100.0 / 100.0Strict
TkA08G228540LXL04_033067JCVI_TKOH_0035071.9100.0 / 100.0Review
TkA08G228650LXL04_033069JCVI_TKOH_0035096.192.391 / 75.444Probable
TkA08G228820LXL04_033072JCVI_TKOH_0035099.2100.0 / 100.0Strict
TkA08G228890LXL04_033074JCVI_TKOH_0035099.5100.0 / 100.0Strict
TkA08G228900LXL04_033075JCVI_TKOH_0035099.4100.0 / 68.182Review
TkA08G229020LXL04_033077JCVI_TKOH_0035097.4100.0 / 86.56Strict
TkA08G229030LXL04_033076JCVI_TKOH_0035090.4100.0 / 100.0Probable
TkA08G229130LXL04_033080JCVI_TKOH_0035097.399.096 / 68.344Review
TkA08G229460LXL04_033083JCVI_TKOH_0035087.296.698 / 56.589Review
TkA08G229470LXL04_033085JCVI_TKOH_0035082.296.053 / 73.244Review
TkA08G229580LXL04_033088JCVI_TKOH_0035099.696.538 / 100.0Complex
TkA08G229590LXL04_033089JCVI_TKOH_0035093.1100.0 / 100.0Complex
TkA08G229690LXL04_033090JCVI_TKOH_0035098.6100.0 / 100.0Complex
TkA08G229740LXL04_033092JCVI_TKOH_0035099.497.024 / 48.947Review
TkA08G229790LXL04_033093JCVI_TKOH_0035095.9100.0 / 100.0Strict
TkA08G229960LXL04_033094JCVI_TKOH_0035098.2100.0 / 100.0Strict
TkA08G229970LXL04_033095JCVI_TKOH_0035098.9100.0 / 100.0Complex
TkA08G230350LXL04_033098JCVI_TKOH_0035098.893.727 / 100.0Strict
TkA08G230560LXL04_033101JCVI_TKOH_0035094.5100.0 / 55.673Review
TkA08G230590LXL04_033103JCVI_TKOH_00350100.087.261 / 59.825Review
TkA08G230940LXL04_033104JCVI_TKOH_0035093.298.023 / 81.298Probable
TkA08G231040LXL04_033107JCVI_TKOH_0035098.668.246 / 39.237Review
TkA08G231800LXL04_033113JCVI_TKOH_0035088.9100.0 / 100.0Review
TkA08G231920LXL04_033114JCVI_TKOH_0035099.4100.0 / 100.0Complex
TkA08G232130LXL04_033114JCVI_TKOH_0035083.294.867 / 49.097Complex
TkA08G232460LXL04_033119JCVI_TKOH_0035092.1100.0 / 100.0Complex
TkA08G232620LXL04_033124JCVI_TKOH_0035073.087.255 / 11.634Complex
TkA08G232750LXL04_033122JCVI_TKOH_0035084.2100.0 / 80.645Complex