同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00275
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 55
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00275

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00275 Chr06 47550419-50668096 Chr05 75973327-79379006 mixed High 55 anchors
Chr06 47550419-50668096 Chr05 75973327-79379006 JCVI_TKOH_00275 · 55 gene pairs TkA06G181930 | LXL04_024062 | 99.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G182370 | LXL04_024061 | 69.2% | non_reciprocal_best_hit | Complex TkA06G182460 | LXL04_024060 | 99.7% | multi_source_to_OH1004 | Complex TkA06G182860 | LXL04_024057 | 100.0% | multi_source_to_OH1004 | Complex TkA06G183120 | LXL04_024056 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA06G183420 | LXL04_024055 | 99.2% | RBH_high_identity_coverage_synteny | Strict TkA06G183920 | LXL04_024052 | 98.9% | RBH_high_identity_coverage_synteny | Strict TkA06G184360 | LXL04_024051 | 99.1% | multi_source_to_OH1004 | Complex TkA06G184410 | LXL04_024049 | 97.1% | multi_candidate_from_TK1151 | Complex TkA06G184530 | LXL04_024047 | 94.2% | non_reciprocal_best_hit | Complex TkA06G184910 | LXL04_024047 | 96.2% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G185050 | LXL04_024045 | 100.0% | multi_source_to_OH1004 | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00275 Chr06:47550419-50668096 Chr05:75973327-79379006 mixed 55 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 55 · 当前范围 1–55 · 页码 1/1

TkA06G181930 → LXL04_024062
99.7%
TkA06G182370 → LXL04_024061
69.2%
TkA06G182460 → LXL04_024060
99.7%
TkA06G182860 → LXL04_024057
100.0%
TkA06G183120 → LXL04_024056
99.4%
TkA06G183420 → LXL04_024055
99.2%
TkA06G183920 → LXL04_024052
98.9%
TkA06G184360 → LXL04_024051
99.1%
TkA06G184410 → LXL04_024049
97.1%
TkA06G184530 → LXL04_024047
94.2%
TkA06G184910 → LXL04_024047
96.2%
TkA06G185050 → LXL04_024045
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA06G181930LXL04_024062JCVI_TKOH_0027599.781.742 / 39.06待复核
TkA06G182370LXL04_024061JCVI_TKOH_0027569.2100.0 / 100.0Complex
TkA06G182460LXL04_024060JCVI_TKOH_0027599.790.212 / 67.126Complex
TkA06G182860LXL04_024057JCVI_TKOH_00275100.0100.0 / 100.0Complex
TkA06G183120LXL04_024056JCVI_TKOH_0027599.4100.0 / 100.0Strict
TkA06G183420LXL04_024055JCVI_TKOH_0027599.2100.0 / 100.0Strict
TkA06G183920LXL04_024052JCVI_TKOH_0027598.9100.0 / 100.0Strict
TkA06G184360LXL04_024051JCVI_TKOH_0027599.1100.0 / 80.529Complex
TkA06G184410LXL04_024049JCVI_TKOH_0027597.1100.0 / 100.0Complex
TkA06G184530LXL04_024047JCVI_TKOH_0027594.248.148 / 58.427Complex
TkA06G184910LXL04_024047JCVI_TKOH_0027596.248.148 / 58.427待复核
TkA06G185050LXL04_024045JCVI_TKOH_00275100.088.339 / 67.204Complex
TkA06G185160LXL04_024044JCVI_TKOH_00275100.0100.0 / 100.0Strict
TkA06G185190LXL04_024043JCVI_TKOH_00275100.0100.0 / 100.0待复核
TkA06G185380LXL04_024042JCVI_TKOH_0027598.594.42 / 89.355Strict
TkA06G185390LXL04_024041JCVI_TKOH_00275100.0100.0 / 100.0Complex
TkA06G185510LXL04_024041JCVI_TKOH_0027588.384.615 / 99.248Complex
TkA06G185530LXL04_024040JCVI_TKOH_0027598.1100.0 / 85.359Strict
TkA06G185540LXL04_024039JCVI_TKOH_0027599.8100.0 / 84.391Strict
TkA06G185800LXL04_024037JCVI_TKOH_0027599.899.101 / 92.295Strict
TkA06G185900LXL04_024033JCVI_TKOH_0027599.5100.0 / 100.0Strict
TkA06G185940LXL04_024032JCVI_TKOH_00275100.0100.0 / 100.0Strict
TkA06G185990LXL04_024031JCVI_TKOH_00275100.063.025 / 8.352待复核
TkA06G186090LXL04_024028JCVI_TKOH_0027597.875.714 / 86.279Probable
TkA06G186100LXL04_024027JCVI_TKOH_0027590.084.01 / 100.0Probable
TkA06G186110LXL04_024026JCVI_TKOH_0027598.1100.0 / 100.0Strict
TkA06G186120LXL04_024025JCVI_TKOH_0027599.2100.0 / 100.0Strict
TkA06G186190LXL04_024024JCVI_TKOH_0027598.0100.0 / 100.0Strict
TkA06G186300LXL04_024022JCVI_TKOH_0027599.693.151 / 83.692Complex
TkA06G186640LXL04_024020JCVI_TKOH_0027593.7100.0 / 100.0Probable
TkA06G187920LXL04_024014JCVI_TKOH_00275100.095.37 / 56.284待复核
TkA06G188040LXL04_024012JCVI_TKOH_0027597.890.291 / 54.706待复核
TkA06G188050LXL04_024011JCVI_TKOH_0027599.4100.0 / 100.0Complex
TkA06G188120LXL04_024010JCVI_TKOH_0027550.496.234 / 66.495Complex
TkA06G188210LXL04_024010JCVI_TKOH_0027578.686.755 / 33.763Complex
TkA06G188240LXL04_024010JCVI_TKOH_0027581.4100.0 / 100.0Complex
TkA06G188360LXL04_024010JCVI_TKOH_0027564.498.066 / 99.227Complex
TkA06G188630LXL04_024007JCVI_TKOH_00275100.0100.0 / 100.0Strict
TkA06G188640LXL04_024006JCVI_TKOH_0027598.7100.0 / 37.799待复核
TkA06G188750LXL04_024005JCVI_TKOH_0027599.4100.0 / 100.0Strict
TkA06G189380LXL04_024001JCVI_TKOH_0027584.1100.0 / 100.0待复核
TkA06G190180LXL04_023999JCVI_TKOH_0027595.8100.0 / 100.0Strict
TkA06G190330LXL04_023995JCVI_TKOH_0027598.1100.0 / 100.0Strict
TkA06G190520LXL04_023992JCVI_TKOH_0027597.9100.0 / 100.0Complex
TkA06G190540LXL04_023991JCVI_TKOH_0027599.598.013 / 78.169Probable
TkA06G190550LXL04_023991JCVI_TKOH_00275100.0100.0 / 19.014待复核
TkA06G190560LXL04_023990JCVI_TKOH_00275100.0100.0 / 80.546Strict
TkA06G190700LXL04_023987JCVI_TKOH_0027599.8100.0 / 66.517Complex
TkA06G190710LXL04_023986JCVI_TKOH_0027598.9100.0 / 77.522Complex
TkA06G190730LXL04_023985JCVI_TKOH_0027595.0100.0 / 100.0Strict
TkA06G190750LXL04_023982JCVI_TKOH_0027556.4100.0 / 95.539Complex
TkA06G191100LXL04_023982JCVI_TKOH_0027579.1100.0 / 56.877Complex
TkA06G191120LXL04_023979JCVI_TKOH_0027597.5100.0 / 100.0待复核
TkA06G191660LXL04_023977JCVI_TKOH_00275100.0100.0 / 100.0Strict
TkA06G193330LXL04_023974JCVI_TKOH_0027598.6100.0 / 100.0Strict