Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00287

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 166

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00287

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00287 Chr06 108537712-118199498 Chr05 1473887-10728699 mixed High 166 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00287`	Chr06:108537712-118199498	Chr05:1473887-10728699	mixed	166	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 166 · Showing 1–166 · Page 1/1

Download All Anchors TSV

TkA06G439140 → LXL04_022827

97.1%

TkA06G439170 → LXL04_022826

100.0%

TkA06G439250 → LXL04_022825

69.1%

TkA06G439300 → LXL04_022824

99.6%

TkA06G439330 → LXL04_022823

77.4%

TkA06G439410 → LXL04_022827

49.5%

TkA06G439550 → LXL04_022819

100.0%

TkA06G439560 → LXL04_022818

96.7%

TkA06G440300 → LXL04_022817

94.3%

TkA06G440820 → LXL04_022813

98.2%

TkA06G440990 → LXL04_022846

98.0%

TkA06G441000 → LXL04_022845

98.8%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA06G439140`	`LXL04_022827`	`JCVI_TKOH_00287`	97.1	100.0 / 100.0	Complex
`TkA06G439170`	`LXL04_022826`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G439250`	`LXL04_022825`	`JCVI_TKOH_00287`	69.1	74.02 / 10.398	Complex
`TkA06G439300`	`LXL04_022824`	`JCVI_TKOH_00287`	99.6	100.0 / 100.0	Strict
`TkA06G439330`	`LXL04_022823`	`JCVI_TKOH_00287`	77.4	81.757 / 42.566	Review
`TkA06G439410`	`LXL04_022827`	`JCVI_TKOH_00287`	49.5	100.0 / 98.714	Complex
`TkA06G439550`	`LXL04_022819`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G439560`	`LXL04_022818`	`JCVI_TKOH_00287`	96.7	100.0 / 100.0	Strict
`TkA06G440300`	`LXL04_022817`	`JCVI_TKOH_00287`	94.3	100.0 / 100.0	Probable
`TkA06G440820`	`LXL04_022813`	`JCVI_TKOH_00287`	98.2	100.0 / 100.0	Complex
`TkA06G440990`	`LXL04_022846`	`JCVI_TKOH_00287`	98.0	100.0 / 100.0	Strict
`TkA06G441000`	`LXL04_022845`	`JCVI_TKOH_00287`	98.8	98.801 / 99.758	Complex
`TkA06G441070`	`LXL04_022839`	`JCVI_TKOH_00287`	98.1	98.131 / 100.0	Strict
`TkA06G441090`	`LXL04_022841`	`JCVI_TKOH_00287`	89.3	38.889 / 31.461	Review
`TkA06G441110`	`LXL04_022838`	`JCVI_TKOH_00287`	98.3	100.0 / 100.0	Strict
`TkA06G441480`	`LXL04_022833`	`JCVI_TKOH_00287`	99.9	100.0 / 100.0	Strict
`TkA06G441850`	`LXL04_022830`	`JCVI_TKOH_00287`	94.6	100.0 / 100.0	Complex
`TkA06G442310`	`LXL04_022828`	`JCVI_TKOH_00287`	100.0	100.0 / 79.137	Probable
`TkA06G442350`	`LXL04_022827`	`JCVI_TKOH_00287`	97.4	100.0 / 100.0	Complex
`TkA06G442400`	`LXL04_022826`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G442480`	`LXL04_022825`	`JCVI_TKOH_00287`	91.2	99.377 / 13.991	Complex
`TkA06G442540`	`LXL04_022810`	`JCVI_TKOH_00287`	94.1	99.21 / 94.242	Probable
`TkA06G442550`	`LXL04_022809`	`JCVI_TKOH_00287`	92.8	100.0 / 100.0	Probable
`TkA06G442670`	`LXL04_022806`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G442700`	`LXL04_022804`	`JCVI_TKOH_00287`	94.9	100.0 / 97.917	Probable
`TkA06G442780`	`LXL04_022803`	`JCVI_TKOH_00287`	96.4	100.0 / 100.0	Strict
`TkA06G443340`	`LXL04_022802`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G443660`	`LXL04_022801`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G444010`	`LXL04_022800`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G444200`	`LXL04_022797`	`JCVI_TKOH_00287`	98.4	100.0 / 100.0	Complex
`TkA06G444410`	`LXL04_022797`	`JCVI_TKOH_00287`	86.6	91.822 / 78.165	Complex
`TkA06G444830`	`LXL04_022792`	`JCVI_TKOH_00287`	98.5	99.7 / 56.849	Review
`TkA06G445390`	`LXL04_022790`	`JCVI_TKOH_00287`	98.9	100.0 / 100.0	Complex
`TkA06G445400`	`LXL04_022789`	`JCVI_TKOH_00287`	91.0	100.0 / 100.0	Complex
`TkA06G446280`	`LXL04_022786`	`JCVI_TKOH_00287`	98.5	100.0 / 100.0	Complex
`TkA06G446350`	`LXL04_022783`	`JCVI_TKOH_00287`	99.3	100.0 / 100.0	Complex
`TkA06G446750`	`LXL04_022782`	`JCVI_TKOH_00287`	94.1	84.158 / 21.519	Complex
`TkA06G447020`	`LXL04_022781`	`JCVI_TKOH_00287`	77.7	100.0 / 96.375	Complex
`TkA06G447190`	`LXL04_022780`	`JCVI_TKOH_00287`	98.0	100.0 / 100.0	Strict
`TkA06G447320`	`LXL04_022779`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G447430`	`LXL04_022778`	`JCVI_TKOH_00287`	94.7	100.0 / 100.0	Probable
`TkA06G447690`	`LXL04_022777`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G449610`	`LXL04_022768`	`JCVI_TKOH_00287`	99.2	100.0 / 100.0	Strict
`TkA06G449990`	`LXL04_022768`	`JCVI_TKOH_00287`	71.1	95.686 / 39.87	Complex
`TkA06G450020`	`LXL04_022768`	`JCVI_TKOH_00287`	77.6	94.366 / 21.718	Complex
`TkA06G450140`	`LXL04_022766`	`JCVI_TKOH_00287`	94.4	100.0 / 100.0	Probable
`TkA06G450150`	`LXL04_022765`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G450160`	`LXL04_022764`	`JCVI_TKOH_00287`	98.5	100.0 / 100.0	Strict
`TkA06G451090`	`LXL04_022761`	`JCVI_TKOH_00287`	98.6	100.0 / 82.386	Strict
`TkA06G451630`	`LXL04_022759`	`JCVI_TKOH_00287`	97.9	100.0 / 100.0	Complex
`TkA06G451930`	`LXL04_022759`	`JCVI_TKOH_00287`	63.3	45.066 / 79.237	Complex
`TkA06G452110`	`LXL04_022758`	`JCVI_TKOH_00287`	97.8	100.0 / 100.0	Strict
`TkA06G453470`	`LXL04_022756`	`JCVI_TKOH_00287`	99.6	99.6 / 76.38	Probable
`TkA06G453860`	`LXL04_022755`	`JCVI_TKOH_00287`	97.2	66.755 / 65.195	Complex
`TkA06G453980`	`LXL04_022754`	`JCVI_TKOH_00287`	99.8	100.0 / 100.0	Complex
`TkA06G454030`	`LXL04_022751`	`JCVI_TKOH_00287`	99.1	100.0 / 100.0	Review
`TkA06G454700`	`LXL04_022754`	`JCVI_TKOH_00287`	99.8	100.0 / 100.0	Complex
`TkA06G454920`	`LXL04_022751`	`JCVI_TKOH_00287`	97.7	100.0 / 100.0	Complex
`TkA06G455280`	`LXL04_022749`	`JCVI_TKOH_00287`	99.4	100.0 / 100.0	Strict
`TkA06G455460`	`LXL04_022748`	`JCVI_TKOH_00287`	97.1	92.282 / 18.66	Review
`TkA06G455470`	`LXL04_022748`	`JCVI_TKOH_00287`	99.4	98.324 / 12.03	Review
`TkA06G456270`	`LXL04_022746`	`JCVI_TKOH_00287`	99.8	100.0 / 100.0	Strict
`TkA06G456290`	`LXL04_022745`	`JCVI_TKOH_00287`	99.6	99.744 / 100.0	Strict
`TkA06G456340`	`LXL04_022743`	`JCVI_TKOH_00287`	98.7	100.0 / 100.0	Complex
`TkA06G456820`	`LXL04_022738`	`JCVI_TKOH_00287`	99.1	100.0 / 99.203	Strict
`TkA06G456840`	`LXL04_022737`	`JCVI_TKOH_00287`	60.9	53.482 / 68.649	Review
`TkA06G456890`	`LXL04_022736`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G457000`	`LXL04_022732`	`JCVI_TKOH_00287`	80.0	100.0 / 61.468	Review
`TkA06G457010`	`LXL04_022731`	`JCVI_TKOH_00287`	95.9	100.0 / 99.522	Strict
`TkA06G457210`	`LXL04_022728`	`JCVI_TKOH_00287`	86.3	100.0 / 100.0	Complex
`TkA06G457360`	`LXL04_022727`	`JCVI_TKOH_00287`	99.4	100.0 / 58.81	Review
`TkA06G457820`	`LXL04_022726`	`JCVI_TKOH_00287`	85.1	92.553 / 19.931	Complex
`TkA06G458060`	`LXL04_022723`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G458070`	`LXL04_022722`	`JCVI_TKOH_00287`	90.5	100.0 / 100.0	Probable
`TkA06G458160`	`LXL04_022721`	`JCVI_TKOH_00287`	97.6	100.0 / 100.0	Strict
`TkA06G458170`	`LXL04_022720`	`JCVI_TKOH_00287`	99.8	100.0 / 100.0	Strict
`TkA06G458220`	`LXL04_022719`	`JCVI_TKOH_00287`	97.2	100.0 / 100.0	Complex
`TkA06G459310`	`LXL04_022716`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G459780`	`LXL04_022713`	`JCVI_TKOH_00287`	99.7	100.0 / 69.735	Complex
`TkA06G460000`	`LXL04_022710`	`JCVI_TKOH_00287`	97.3	97.835 / 7.997	Review
`TkA06G460270`	`LXL04_022711`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G460300`	`LXL04_022710`	`JCVI_TKOH_00287`	98.2	100.0 / 39.455	Review
`TkA06G461710`	`LXL04_022708`	`JCVI_TKOH_00287`	100.0	17.308 / 16.667	Complex
`TkA06G462830`	`LXL04_022709`	`JCVI_TKOH_00287`	71.7	100.0 / 79.375	Complex
`TkA06G462860`	`LXL04_022709`	`JCVI_TKOH_00287`	66.3	83.81 / 55.0	Complex
`TkA06G463020`	`LXL04_022709`	`JCVI_TKOH_00287`	60.1	91.071 / 95.625	Review
`TkA06G463170`	`LXL04_022703`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G463520`	`LXL04_022702`	`JCVI_TKOH_00287`	90.3	100.0 / 100.0	Probable
`TkA06G463620`	`LXL04_022700`	`JCVI_TKOH_00287`	98.2	100.0 / 93.258	Strict
`TkA06G464080`	`LXL04_022697`	`JCVI_TKOH_00287`	99.4	89.594 / 48.892	Review
`TkA06G464090`	`LXL04_022696`	`JCVI_TKOH_00287`	99.8	99.334 / 87.923	Strict
`TkA06G465480`	`LXL04_022691`	`JCVI_TKOH_00287`	100.0	100.0 / 59.416	Review
`TkA06G465750`	`LXL04_022690`	`JCVI_TKOH_00287`	89.2	100.0 / 98.409	Complex
`TkA06G465760`	`LXL04_022688`	`JCVI_TKOH_00287`	97.9	100.0 / 100.0	Strict
`TkA06G465780`	`LXL04_022687`	`JCVI_TKOH_00287`	99.7	100.0 / 100.0	Strict
`TkA06G465940`	`LXL04_022686`	`JCVI_TKOH_00287`	98.6	100.0 / 100.0	Strict
`TkA06G465960`	`LXL04_022685`	`JCVI_TKOH_00287`	96.4	100.0 / 100.0	Strict
`TkA06G465970`	`LXL04_022684`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G466160`	`LXL04_022682`	`JCVI_TKOH_00287`	99.7	100.0 / 100.0	Strict
`TkA06G466180`	`LXL04_022681`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G466210`	`LXL04_022679`	`JCVI_TKOH_00287`	74.4	96.992 / 97.786	Complex
`TkA06G466230`	`LXL04_022679`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G466240`	`LXL04_022678`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G466770`	`LXL04_022676`	`JCVI_TKOH_00287`	100.0	90.93 / 71.743	Probable
`TkA06G467230`	`LXL04_022674`	`JCVI_TKOH_00287`	99.3	100.0 / 100.0	Strict
`TkA06G467290`	`LXL04_022673`	`JCVI_TKOH_00287`	100.0	32.743 / 14.567	Complex
`TkA06G467330`	`LXL04_022670`	`JCVI_TKOH_00287`	99.6	96.653 / 100.0	Complex
`TkA06G467870`	`LXL04_022667`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G468090`	`LXL04_022660`	`JCVI_TKOH_00287`	100.0	100.0 / 84.8	Review
`TkA06G468170`	`LXL04_022658`	`JCVI_TKOH_00287`	86.8	100.0 / 100.0	Review
`TkA06G468180`	`LXL04_022657`	`JCVI_TKOH_00287`	100.0	100.0 / 68.919	Review
`TkA06G468190`	`LXL04_022656`	`JCVI_TKOH_00287`	100.0	99.317 / 95.41	Complex
`TkA06G468280`	`LXL04_022655`	`JCVI_TKOH_00287`	99.2	97.521 / 100.0	Strict
`TkA06G468320`	`LXL04_022654`	`JCVI_TKOH_00287`	99.6	100.0 / 36.298	Review
`TkA06G468340`	`LXL04_022653`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G468350`	`LXL04_022652`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G468380`	`LXL04_022651`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G468410`	`LXL04_022650`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G468490`	`LXL04_022648`	`JCVI_TKOH_00287`	99.9	100.0 / 100.0	Strict
`TkA06G468590`	`LXL04_022647`	`JCVI_TKOH_00287`	99.9	100.0 / 100.0	Complex
`TkA06G468870`	`LXL04_022646`	`JCVI_TKOH_00287`	93.7	100.0 / 75.517	Complex
`TkA06G469180`	`LXL04_022643`	`JCVI_TKOH_00287`	99.1	81.034 / 72.308	Probable
`TkA06G469770`	`LXL04_022641`	`JCVI_TKOH_00287`	98.9	100.0 / 100.0	Strict
`TkA06G470390`	`LXL04_022635`	`JCVI_TKOH_00287`	93.3	100.0 / 100.0	Complex
`TkA06G470780`	`LXL04_022635`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Review
`TkA06G471010`	`LXL04_022633`	`JCVI_TKOH_00287`	100.0	68.831 / 66.807	Complex
`TkA06G471050`	`LXL04_022632`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Strict
`TkA06G471100`	`LXL04_022630`	`JCVI_TKOH_00287`	99.3	100.0 / 100.0	Strict
`TkA06G471110`	`LXL04_022629`	`JCVI_TKOH_00287`	98.4	98.073 / 100.0	Strict
`TkA06G472640`	`LXL04_022624`	`JCVI_TKOH_00287`	100.0	100.0 / 99.348	Strict
`TkA06G472660`	`LXL04_022623`	`JCVI_TKOH_00287`	100.0	99.281 / 49.11	Review
`TkA06G472950`	`LXL04_022621`	`JCVI_TKOH_00287`	100.0	98.773 / 53.135	Review
`TkA06G473100`	`LXL04_022617`	`JCVI_TKOH_00287`	99.2	98.347 / 67.514	Complex
`TkA06G473120`	`LXL04_022616`	`JCVI_TKOH_00287`	98.7	100.0 / 100.0	Strict
`TkA06G473220`	`LXL04_022614`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G473400`	`LXL04_022613`	`JCVI_TKOH_00287`	94.4	61.456 / 100.0	Review
`TkA06G473550`	`LXL04_022611`	`JCVI_TKOH_00287`	99.9	100.0 / 100.0	Strict
`TkA06G473560`	`LXL04_022610`	`JCVI_TKOH_00287`	99.7	100.0 / 100.0	Strict
`TkA06G473570`	`LXL04_022609`	`JCVI_TKOH_00287`	94.2	100.0 / 82.47	Probable
`TkA06G473780`	`LXL04_022608`	`JCVI_TKOH_00287`	99.9	100.0 / 100.0	Strict
`TkA06G473790`	`LXL04_022606`	`JCVI_TKOH_00287`	97.2	90.282 / 61.516	Complex
`TkA06G473800`	`LXL04_022604`	`JCVI_TKOH_00287`	99.5	100.0 / 100.0	Strict
`TkA06G473990`	`LXL04_022600`	`JCVI_TKOH_00287`	100.0	100.0 / 96.454	Strict
`TkA06G474000`	`LXL04_022599`	`JCVI_TKOH_00287`	99.4	93.235 / 84.759	Strict
`TkA06G474240`	`LXL04_022589`	`JCVI_TKOH_00287`	95.7	100.0 / 100.0	Review
`TkA06G474250`	`LXL04_022588`	`JCVI_TKOH_00287`	99.4	100.0 / 51.768	Review
`TkA06G474260`	`LXL04_022586`	`JCVI_TKOH_00287`	99.2	100.0 / 87.407	Complex
`TkA06G474310`	`LXL04_022585`	`JCVI_TKOH_00287`	99.3	93.168 / 34.722	Review
`TkA06G474340`	`LXL04_022583`	`JCVI_TKOH_00287`	78.4	87.075 / 57.303	Review
`TkA06G474600`	`LXL04_022582`	`JCVI_TKOH_00287`	99.6	94.98 / 74.606	Probable
`TkA06G474610`	`LXL04_022581`	`JCVI_TKOH_00287`	100.0	100.0 / 23.78	Review
`TkA06G474620`	`LXL04_022581`	`JCVI_TKOH_00287`	93.9	100.0 / 40.041	Review
`TkA06G475260`	`LXL04_022579`	`JCVI_TKOH_00287`	100.0	100.0 / 100.0	Complex
`TkA06G475390`	`LXL04_022577`	`JCVI_TKOH_00287`	99.9	100.0 / 100.0	Strict
`TkA06G475400`	`LXL04_022576`	`JCVI_TKOH_00287`	98.8	99.09 / 92.645	Complex
`TkA06G475470`	`LXL04_022575`	`JCVI_TKOH_00287`	98.3	100.0 / 100.0	Strict
`TkA06G475500`	`LXL04_022574`	`JCVI_TKOH_00287`	100.0	98.194 / 51.91	Review
`TkA06G475650`	`LXL04_022572`	`JCVI_TKOH_00287`	74.7	68.293 / 69.403	Review
`TkA06G475750`	`LXL04_022570`	`JCVI_TKOH_00287`	99.8	100.0 / 100.0	Complex
`TkA06G476010`	`LXL04_022569`	`JCVI_TKOH_00287`	98.7	100.0 / 100.0	Strict
`TkA06G476020`	`LXL04_022568`	`JCVI_TKOH_00287`	99.7	98.408 / 93.072	Complex
`TkA06G476040`	`LXL04_022567`	`JCVI_TKOH_00287`	84.5	100.0 / 100.0	Review
`TkA06G476060`	`LXL04_022566`	`JCVI_TKOH_00287`	96.3	100.0 / 68.333	Review
`TkA06G476260`	`LXL04_022563`	`JCVI_TKOH_00287`	98.3	100.0 / 100.0	Strict
`TkA06G476290`	`LXL04_022562`	`JCVI_TKOH_00287`	100.0	100.0 / 55.187	Review
`TkA06G476590`	`LXL04_022560`	`JCVI_TKOH_00287`	100.0	100.0 / 66.667	Complex