Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00088

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 160

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00088

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00088 Chr02 92104315-98854293 Chr03 58285210-64868043 mixed High 160 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00088`	Chr02:92104315-98854293	Chr03:58285210-64868043	mixed	160	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 160 · Showing 1–160 · Page 1/1

Download All Anchors TSV

TkA02G362170 → LXL04_015144

100.0%

TkA02G362320 → LXL04_015142

99.6%

TkA02G362380 → LXL04_015141

100.0%

TkA02G362390 → LXL04_015140

100.0%

TkA02G362420 → LXL04_015139

96.9%

TkA02G362430 → LXL04_015139

100.0%

TkA02G362460 → LXL04_015138

62.7%

TkA02G362560 → LXL04_015139

66.1%

TkA02G362620 → LXL04_015136

98.9%

TkA02G362730 → LXL04_015135

99.5%

TkA02G362740 → LXL04_015134

53.7%

TkA02G362910 → LXL04_015134

99.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA02G362170`	`LXL04_015144`	`JCVI_TKOH_00088`	100.0	77.907 / 46.048	Complex
`TkA02G362320`	`LXL04_015142`	`JCVI_TKOH_00088`	99.6	100.0 / 100.0	Strict
`TkA02G362380`	`LXL04_015141`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G362390`	`LXL04_015140`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G362420`	`LXL04_015139`	`JCVI_TKOH_00088`	96.9	99.744 / 34.767	Review
`TkA02G362430`	`LXL04_015139`	`JCVI_TKOH_00088`	100.0	83.333 / 11.436	Complex
`TkA02G362460`	`LXL04_015138`	`JCVI_TKOH_00088`	62.7	100.0 / 100.0	Review
`TkA02G362560`	`LXL04_015139`	`JCVI_TKOH_00088`	66.1	97.674 / 11.528	Complex
`TkA02G362620`	`LXL04_015136`	`JCVI_TKOH_00088`	98.9	100.0 / 67.416	Review
`TkA02G362730`	`LXL04_015135`	`JCVI_TKOH_00088`	99.5	98.802 / 99.331	Strict
`TkA02G362740`	`LXL04_015134`	`JCVI_TKOH_00088`	53.7	91.727 / 21.555	Complex
`TkA02G362910`	`LXL04_015134`	`JCVI_TKOH_00088`	99.0	89.489 / 25.19	Review
`TkA02G362930`	`LXL04_015134`	`JCVI_TKOH_00088`	100.0	98.58 / 29.332	Review
`TkA02G363550`	`LXL04_015132`	`JCVI_TKOH_00088`	99.2	100.0 / 77.007	Complex
`TkA02G363570`	`LXL04_015131`	`JCVI_TKOH_00088`	98.9	76.404 / 92.517	Probable
`TkA02G364970`	`LXL04_015128`	`JCVI_TKOH_00088`	100.0	96.438 / 99.717	Complex
`TkA02G365120`	`LXL04_015125`	`JCVI_TKOH_00088`	99.8	100.0 / 100.0	Strict
`TkA02G365170`	`LXL04_015123`	`JCVI_TKOH_00088`	99.6	100.0 / 71.981	Complex
`TkA02G366180`	`LXL04_015118`	`JCVI_TKOH_00088`	98.1	79.225 / 75.424	Probable
`TkA02G366190`	`LXL04_015119`	`JCVI_TKOH_00088`	97.2	13.433 / 17.308	Review
`TkA02G366260`	`LXL04_015120`	`JCVI_TKOH_00088`	98.3	97.684 / 90.802	Strict
`TkA02G367060`	`LXL04_015116`	`JCVI_TKOH_00088`	88.6	100.0 / 99.465	Complex
`TkA02G367150`	`LXL04_015115`	`JCVI_TKOH_00088`	98.8	97.301 / 90.876	Strict
`TkA02G367320`	`LXL04_015112`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Review
`TkA02G367580`	`LXL04_015108`	`JCVI_TKOH_00088`	94.5	97.187 / 62.871	Complex
`TkA02G367620`	`LXL04_015109`	`JCVI_TKOH_00088`	94.6	100.0 / 100.0	Probable
`TkA02G367630`	`LXL04_015108`	`JCVI_TKOH_00088`	99.8	81.287 / 89.604	Complex
`TkA02G367950`	`LXL04_015107`	`JCVI_TKOH_00088`	92.4	100.0 / 100.0	Complex
`TkA02G367970`	`LXL04_015106`	`JCVI_TKOH_00088`	89.2	100.0 / 100.0	Review
`TkA02G368030`	`LXL04_015104`	`JCVI_TKOH_00088`	98.2	100.0 / 100.0	Strict
`TkA02G368040`	`LXL04_015103`	`JCVI_TKOH_00088`	79.9	96.176 / 96.03	Review
`TkA02G368080`	`LXL04_015102`	`JCVI_TKOH_00088`	98.1	87.027 / 36.425	Review
`TkA02G368810`	`LXL04_015100`	`JCVI_TKOH_00088`	99.8	100.0 / 100.0	Strict
`TkA02G368840`	`LXL04_015099`	`JCVI_TKOH_00088`	94.5	68.75 / 86.667	Review
`TkA02G369180`	`LXL04_015098`	`JCVI_TKOH_00088`	99.8	100.0 / 100.0	Complex
`TkA02G369190`	`LXL04_015097`	`JCVI_TKOH_00088`	90.3	100.0 / 100.0	Complex
`TkA02G369300`	`LXL04_015097`	`JCVI_TKOH_00088`	69.2	100.0 / 100.0	Complex
`TkA02G369320`	`LXL04_015096`	`JCVI_TKOH_00088`	65.2	100.0 / 100.0	Complex
`TkA02G369460`	`LXL04_015095`	`JCVI_TKOH_00088`	99.3	97.603 / 92.81	Strict
`TkA02G369660`	`LXL04_015092`	`JCVI_TKOH_00088`	99.7	100.0 / 100.0	Strict
`TkA02G369820`	`LXL04_015091`	`JCVI_TKOH_00088`	91.4	100.0 / 92.553	Probable
`TkA02G369860`	`LXL04_015090`	`JCVI_TKOH_00088`	98.5	100.0 / 77.543	Complex
`TkA02G369870`	`LXL04_015090`	`JCVI_TKOH_00088`	82.9	99.796 / 99.808	Complex
`TkA02G369990`	`LXL04_015088`	`JCVI_TKOH_00088`	97.2	100.0 / 100.0	Strict
`TkA02G370010`	`LXL04_015086`	`JCVI_TKOH_00088`	92.9	100.0 / 100.0	Complex
`TkA02G370210`	`LXL04_015082`	`JCVI_TKOH_00088`	79.7	99.554 / 76.221	Review
`TkA02G370590`	`LXL04_015077`	`JCVI_TKOH_00088`	98.0	38.488 / 94.421	Review
`TkA02G370670`	`LXL04_015073`	`JCVI_TKOH_00088`	97.4	100.0 / 100.0	Strict
`TkA02G370680`	`LXL04_015072`	`JCVI_TKOH_00088`	98.1	100.0 / 100.0	Strict
`TkA02G370780`	`LXL04_015070`	`JCVI_TKOH_00088`	97.3	65.333 / 100.0	Review
`TkA02G370820`	`LXL04_015069`	`JCVI_TKOH_00088`	98.4	100.0 / 100.0	Strict
`TkA02G370930`	`LXL04_015067`	`JCVI_TKOH_00088`	93.1	69.421 / 49.714	Review
`TkA02G371100`	`LXL04_015063`	`JCVI_TKOH_00088`	96.2	100.0 / 100.0	Strict
`TkA02G371140`	`LXL04_015062`	`JCVI_TKOH_00088`	99.3	100.0 / 77.758	Probable
`TkA02G371400`	`LXL04_015057`	`JCVI_TKOH_00088`	97.4	100.0 / 100.0	Strict
`TkA02G371410`	`LXL04_015056`	`JCVI_TKOH_00088`	98.7	100.0 / 100.0	Strict
`TkA02G371530`	`LXL04_015055`	`JCVI_TKOH_00088`	98.6	100.0 / 100.0	Strict
`TkA02G371550`	`LXL04_015053`	`JCVI_TKOH_00088`	96.9	100.0 / 100.0	Review
`TkA02G371570`	`LXL04_015052`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G371850`	`LXL04_015051`	`JCVI_TKOH_00088`	98.8	98.78 / 33.402	Review
`TkA02G371890`	`LXL04_015050`	`JCVI_TKOH_00088`	99.6	100.0 / 100.0	Strict
`TkA02G371900`	`LXL04_015049`	`JCVI_TKOH_00088`	96.4	96.673 / 84.281	Strict
`TkA02G371940`	`LXL04_015047`	`JCVI_TKOH_00088`	99.5	100.0 / 100.0	Complex
`TkA02G372250`	`LXL04_015045`	`JCVI_TKOH_00088`	89.6	97.143 / 95.781	Review
`TkA02G372260`	`LXL04_015044`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G372710`	`LXL04_015043`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G372790`	`LXL04_015042`	`JCVI_TKOH_00088`	84.6	79.255 / 53.455	Complex
`TkA02G372830`	`LXL04_015041`	`JCVI_TKOH_00088`	83.8	100.0 / 100.0	Review
`TkA02G373140`	`LXL04_015036`	`JCVI_TKOH_00088`	99.8	100.0 / 100.0	Strict
`TkA02G373150`	`LXL04_015035`	`JCVI_TKOH_00088`	99.9	100.0 / 77.789	Probable
`TkA02G373180`	`LXL04_015034`	`JCVI_TKOH_00088`	98.6	100.0 / 96.164	Strict
`TkA02G373190`	`LXL04_015033`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G373200`	`LXL04_015032`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G373210`	`LXL04_015031`	`JCVI_TKOH_00088`	84.5	100.0 / 100.0	Review
`TkA02G373240`	`LXL04_015030`	`JCVI_TKOH_00088`	98.0	100.0 / 100.0	Strict
`TkA02G373300`	`LXL04_015029`	`JCVI_TKOH_00088`	98.5	100.0 / 100.0	Strict
`TkA02G373310`	`LXL04_015028`	`JCVI_TKOH_00088`	99.5	100.0 / 100.0	Strict
`TkA02G373770`	`LXL04_015025`	`JCVI_TKOH_00088`	98.6	98.329 / 60.622	Review
`TkA02G374580`	`LXL04_015021`	`JCVI_TKOH_00088`	98.2	100.0 / 100.0	Strict
`TkA02G375050`	`LXL04_015019`	`JCVI_TKOH_00088`	81.5	98.644 / 57.255	Complex
`TkA02G375310`	`LXL04_015019`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Complex
`TkA02G375370`	`LXL04_015017`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G375380`	`LXL04_015016`	`JCVI_TKOH_00088`	73.9	97.306 / 82.316	Complex
`TkA02G375390`	`LXL04_015015`	`JCVI_TKOH_00088`	98.9	100.0 / 100.0	Strict
`TkA02G376180`	`LXL04_015012`	`JCVI_TKOH_00088`	99.4	100.0 / 100.0	Complex
`TkA02G377260`	`LXL04_015002`	`JCVI_TKOH_00088`	99.3	100.0 / 100.0	Complex
`TkA02G377340`	`LXL04_014996`	`JCVI_TKOH_00088`	98.1	100.0 / 100.0	Complex
`TkA02G377370`	`LXL04_014995`	`JCVI_TKOH_00088`	99.2	93.284 / 97.656	Review
`TkA02G377680`	`LXL04_014992`	`JCVI_TKOH_00088`	99.3	95.775 / 48.658	Review
`TkA02G378150`	`LXL04_015006`	`JCVI_TKOH_00088`	99.5	100.0 / 100.0	Strict
`TkA02G378160`	`LXL04_015005`	`JCVI_TKOH_00088`	98.6	94.157 / 100.0	Strict
`TkA02G378220`	`LXL04_015004`	`JCVI_TKOH_00088`	98.7	100.0 / 100.0	Strict
`TkA02G378240`	`LXL04_015002`	`JCVI_TKOH_00088`	97.5	100.0 / 100.0	Complex
`TkA02G378290`	`LXL04_014996`	`JCVI_TKOH_00088`	97.5	100.0 / 100.0	Complex
`TkA02G378530`	`LXL04_014992`	`JCVI_TKOH_00088`	90.3	95.109 / 30.233	Complex
`TkA02G379080`	`LXL04_014990`	`JCVI_TKOH_00088`	99.3	100.0 / 100.0	Strict
`TkA02G379120`	`LXL04_014986`	`JCVI_TKOH_00088`	94.9	78.146 / 78.621	Complex
`TkA02G379150`	`LXL04_014982`	`JCVI_TKOH_00088`	90.8	83.516 / 90.213	Probable
`TkA02G379230`	`LXL04_014979`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G379240`	`LXL04_014978`	`JCVI_TKOH_00088`	99.7	93.275 / 100.0	Strict
`TkA02G380070`	`LXL04_014975`	`JCVI_TKOH_00088`	100.0	88.591 / 46.154	Review
`TkA02G380420`	`LXL04_014971`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G380440`	`LXL04_014969`	`JCVI_TKOH_00088`	97.8	100.0 / 100.0	Strict
`TkA02G380460`	`LXL04_014967`	`JCVI_TKOH_00088`	72.7	90.968 / 93.75	Review
`TkA02G380470`	`LXL04_014966`	`JCVI_TKOH_00088`	99.2	100.0 / 100.0	Strict
`TkA02G380490`	`LXL04_014963`	`JCVI_TKOH_00088`	99.2	100.0 / 100.0	Strict
`TkA02G380500`	`LXL04_014964`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G380550`	`LXL04_014962`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Review
`TkA02G380650`	`LXL04_014961`	`JCVI_TKOH_00088`	97.6	100.0 / 100.0	Complex
`TkA02G380800`	`LXL04_014960`	`JCVI_TKOH_00088`	98.6	97.115 / 94.393	Strict
`TkA02G380820`	`LXL04_014959`	`JCVI_TKOH_00088`	98.7	100.0 / 100.0	Complex
`TkA02G381230`	`LXL04_014957`	`JCVI_TKOH_00088`	99.7	100.0 / 48.907	Review
`TkA02G381370`	`LXL04_014950`	`JCVI_TKOH_00088`	77.4	93.458 / 17.0	Complex
`TkA02G381380`	`LXL04_014950`	`JCVI_TKOH_00088`	94.9	87.821 / 22.833	Complex
`TkA02G381530`	`LXL04_014952`	`JCVI_TKOH_00088`	77.5	100.0 / 100.0	Complex
`TkA02G381550`	`LXL04_014949`	`JCVI_TKOH_00088`	75.7	93.458 / 16.64	Complex
`TkA02G381650`	`LXL04_014950`	`JCVI_TKOH_00088`	92.2	87.342 / 23.0	Complex
`TkA02G381660`	`LXL04_014952`	`JCVI_TKOH_00088`	78.7	100.0 / 29.508	Complex
`TkA02G381680`	`LXL04_014947`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Review
`TkA02G381780`	`LXL04_014946`	`JCVI_TKOH_00088`	98.0	100.0 / 100.0	Complex
`TkA02G381810`	`LXL04_014945`	`JCVI_TKOH_00088`	89.0	100.0 / 25.176	Complex
`TkA02G382240`	`LXL04_014939`	`JCVI_TKOH_00088`	96.5	79.928 / 95.851	Complex
`TkA02G382350`	`LXL04_014938`	`JCVI_TKOH_00088`	99.9	100.0 / 100.0	Complex
`TkA02G382460`	`LXL04_014937`	`JCVI_TKOH_00088`	84.8	81.416 / 38.249	Review
`TkA02G382970`	`LXL04_014935`	`JCVI_TKOH_00088`	99.0	100.0 / 100.0	Strict
`TkA02G383140`	`LXL04_014932`	`JCVI_TKOH_00088`	92.7	100.0 / 100.0	Probable
`TkA02G383240`	`LXL04_014929`	`JCVI_TKOH_00088`	95.4	100.0 / 92.893	Complex
`TkA02G383390`	`LXL04_014928`	`JCVI_TKOH_00088`	94.5	81.614 / 57.053	Complex
`TkA02G383400`	`LXL04_014928`	`JCVI_TKOH_00088`	50.5	36.538 / 28.84	Complex
`TkA02G383600`	`LXL04_014925`	`JCVI_TKOH_00088`	100.0	100.0 / 8.446	Review
`TkA02G383610`	`LXL04_014925`	`JCVI_TKOH_00088`	98.4	87.241 / 20.159	Review
`TkA02G383710`	`LXL04_014925`	`JCVI_TKOH_00088`	92.0	100.0 / 41.753	Complex
`TkA02G383720`	`LXL04_014924`	`JCVI_TKOH_00088`	99.9	73.471 / 99.866	Complex
`TkA02G383730`	`LXL04_014923`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Complex
`TkA02G383750`	`LXL04_014922`	`JCVI_TKOH_00088`	98.0	97.073 / 45.538	Review
`TkA02G384060`	`LXL04_014920`	`JCVI_TKOH_00088`	98.9	92.459 / 99.471	Strict
`TkA02G384070`	`LXL04_014917`	`JCVI_TKOH_00088`	91.4	98.936 / 58.307	Review
`TkA02G384170`	`LXL04_014916`	`JCVI_TKOH_00088`	99.2	100.0 / 100.0	Strict
`TkA02G384750`	`LXL04_014910`	`JCVI_TKOH_00088`	99.0	100.0 / 100.0	Strict
`TkA02G384910`	`LXL04_014907`	`JCVI_TKOH_00088`	100.0	82.096 / 52.661	Complex
`TkA02G385450`	`LXL04_014903`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G385750`	`LXL04_014900`	`JCVI_TKOH_00088`	98.4	99.611 / 97.58	Complex
`TkA02G385870`	`LXL04_014896`	`JCVI_TKOH_00088`	99.1	100.0 / 48.97	Review
`TkA02G385880`	`LXL04_014895`	`JCVI_TKOH_00088`	98.7	99.619 / 59.576	Review
`TkA02G385940`	`LXL04_014894`	`JCVI_TKOH_00088`	100.0	89.919 / 75.338	Probable
`TkA02G386110`	`LXL04_014893`	`JCVI_TKOH_00088`	94.4	100.0 / 100.0	Probable
`TkA02G386300`	`LXL04_014891`	`JCVI_TKOH_00088`	98.9	99.721 / 80.449	Complex
`TkA02G386790`	`LXL04_014885`	`JCVI_TKOH_00088`	83.9	75.338 / 93.697	Complex
`TkA02G386810`	`LXL04_014884`	`JCVI_TKOH_00088`	69.0	99.672 / 18.935	Complex
`TkA02G386850`	`LXL04_014885`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Complex
`TkA02G387170`	`LXL04_014884`	`JCVI_TKOH_00088`	81.9	98.842 / 16.353	Complex
`TkA02G387260`	`LXL04_014869`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G387310`	`LXL04_014872`	`JCVI_TKOH_00088`	100.0	99.773 / 85.243	Strict
`TkA02G387570`	`LXL04_014873`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Strict
`TkA02G387610`	`LXL04_014875`	`JCVI_TKOH_00088`	88.6	100.0 / 100.0	Review
`TkA02G387620`	`LXL04_014876`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Complex
`TkA02G387870`	`LXL04_014877`	`JCVI_TKOH_00088`	67.6	49.351 / 25.17	Complex
`TkA02G388360`	`LXL04_014880`	`JCVI_TKOH_00088`	99.4	100.0 / 63.992	Review
`TkA02G388590`	`LXL04_014883`	`JCVI_TKOH_00088`	100.0	100.0 / 100.0	Complex
`TkA02G388860`	`LXL04_014884`	`JCVI_TKOH_00088`	98.7	97.872 / 12.372	Review