Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00076

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 359

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00076

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00076 Chr02 812606-19470786 Chr03 141044803-158208100 mixed High 159 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00076`	Chr02:812606-19470786	Chr03:141044803-158208100	mixed	359	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 359 · Showing 201–359 · Page 2/2

Previous Download All Anchors TSV

TkA02G045920 → LXL04_017381

100.0%

TkA02G045990 → LXL04_017380

87.0%

TkA02G046000 → LXL04_017381

74.5%

TkA02G046170 → LXL04_017378

96.2%

TkA02G046180 → LXL04_017377

100.0%

TkA02G046240 → LXL04_017376

95.0%

TkA02G046720 → LXL04_017373

99.8%

TkA02G047060 → LXL04_017369

99.4%

TkA02G047090 → LXL04_017368

97.5%

TkA02G047170 → LXL04_017365

97.0%

TkA02G047310 → LXL04_017363

99.2%

TkA02G047340 → LXL04_017362

95.5%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA02G045920`	`LXL04_017381`	`JCVI_TKOH_00076`	100.0	99.459 / 56.269	Review
`TkA02G045990`	`LXL04_017380`	`JCVI_TKOH_00076`	87.0	100.0 / 100.0	Review
`TkA02G046000`	`LXL04_017381`	`JCVI_TKOH_00076`	74.5	62.97 / 96.942	Review
`TkA02G046170`	`LXL04_017378`	`JCVI_TKOH_00076`	96.2	95.833 / 51.111	Review
`TkA02G046180`	`LXL04_017377`	`JCVI_TKOH_00076`	100.0	86.093 / 73.034	Complex
`TkA02G046240`	`LXL04_017376`	`JCVI_TKOH_00076`	95.0	100.0 / 100.0	Complex
`TkA02G046720`	`LXL04_017373`	`JCVI_TKOH_00076`	99.8	100.0 / 100.0	Strict
`TkA02G047060`	`LXL04_017369`	`JCVI_TKOH_00076`	99.4	100.0 / 100.0	Strict
`TkA02G047090`	`LXL04_017368`	`JCVI_TKOH_00076`	97.5	100.0 / 88.398	Strict
`TkA02G047170`	`LXL04_017365`	`JCVI_TKOH_00076`	97.0	100.0 / 100.0	Strict
`TkA02G047310`	`LXL04_017363`	`JCVI_TKOH_00076`	99.2	99.724 / 70.772	Probable
`TkA02G047340`	`LXL04_017362`	`JCVI_TKOH_00076`	95.5	100.0 / 100.0	Complex
`TkA02G047420`	`LXL04_017361`	`JCVI_TKOH_00076`	99.5	100.0 / 100.0	Strict
`TkA02G047460`	`LXL04_017360`	`JCVI_TKOH_00076`	92.3	100.0 / 100.0	Complex
`TkA02G047800`	`LXL04_017355`	`JCVI_TKOH_00076`	57.3	93.929 / 86.972	Complex
`TkA02G047890`	`LXL04_017356`	`JCVI_TKOH_00076`	83.3	99.003 / 39.583	Complex
`TkA02G047930`	`LXL04_017356`	`JCVI_TKOH_00076`	79.5	100.0 / 42.94	Complex
`TkA02G047990`	`LXL04_017355`	`JCVI_TKOH_00076`	98.2	85.023 / 100.0	Complex
`TkA02G048000`	`LXL04_017354`	`JCVI_TKOH_00076`	96.1	96.281 / 29.256	Review
`TkA02G048050`	`LXL04_017355`	`JCVI_TKOH_00076`	99.8	98.458 / 82.018	Complex
`TkA02G048060`	`LXL04_017354`	`JCVI_TKOH_00076`	98.5	89.517 / 68.726	Complex
`TkA02G048490`	`LXL04_017350`	`JCVI_TKOH_00076`	88.9	91.411 / 80.676	Complex
`TkA02G048620`	`LXL04_017349`	`JCVI_TKOH_00076`	85.2	100.0 / 100.0	Complex
`TkA02G048650`	`LXL04_017348`	`JCVI_TKOH_00076`	96.8	99.002 / 98.218	Complex
`TkA02G048730`	`LXL04_017347`	`JCVI_TKOH_00076`	96.0	100.0 / 76.136	Complex
`TkA02G049240`	`LXL04_017348`	`JCVI_TKOH_00076`	97.9	100.0 / 65.347	Complex
`TkA02G049250`	`LXL04_017347`	`JCVI_TKOH_00076`	96.3	100.0 / 90.909	Complex
`TkA02G049560`	`LXL04_017339`	`JCVI_TKOH_00076`	99.4	100.0 / 86.618	Complex
`TkA02G049580`	`LXL04_017338`	`JCVI_TKOH_00076`	100.0	100.0 / 100.0	Strict
`TkA02G049880`	`LXL04_017335`	`JCVI_TKOH_00076`	100.0	100.0 / 85.615	Strict
`TkA02G049890`	`LXL04_017334`	`JCVI_TKOH_00076`	93.2	100.0 / 100.0	Complex
`TkA02G049910`	`LXL04_017333`	`JCVI_TKOH_00076`	77.9	97.209 / 89.761	Review
`TkA02G050010`	`LXL04_017331`	`JCVI_TKOH_00076`	99.1	100.0 / 100.0	Complex
`TkA02G050020`	`LXL04_017330`	`JCVI_TKOH_00076`	98.6	89.408 / 63.778	Complex
`TkA02G050030`	`LXL04_017329`	`JCVI_TKOH_00076`	99.8	100.0 / 100.0	Complex
`TkA02G050860`	`LXL04_017347`	`JCVI_TKOH_00076`	100.0	100.0 / 91.667	Complex
`TkA02G050870`	`LXL04_017348`	`JCVI_TKOH_00076`	99.8	100.0 / 100.0	Complex
`TkA02G050920`	`LXL04_017349`	`JCVI_TKOH_00076`	72.1	96.654 / 64.837	Complex
`TkA02G051020`	`LXL04_017349`	`JCVI_TKOH_00076`	71.8	96.654 / 64.837	Complex
`TkA02G051140`	`LXL04_017352`	`JCVI_TKOH_00076`	98.7	100.0 / 100.0	Complex
`TkA02G051260`	`LXL04_017354`	`JCVI_TKOH_00076`	71.1	98.205 / 88.777	Complex
`TkA02G051270`	`LXL04_017355`	`JCVI_TKOH_00076`	99.6	100.0 / 100.0	Complex
`TkA02G051280`	`LXL04_017356`	`JCVI_TKOH_00076`	53.5	89.412 / 16.435	Complex
`TkA02G051310`	`LXL04_017330`	`JCVI_TKOH_00076`	100.0	89.408 / 63.778	Complex
`TkA02G051320`	`LXL04_017329`	`JCVI_TKOH_00076`	99.5	100.0 / 100.0	Complex
`TkA02G052130`	`LXL04_017325`	`JCVI_TKOH_00076`	61.0	59.13 / 36.145	Complex
`TkA02G052280`	`LXL04_017320`	`JCVI_TKOH_00076`	57.8	94.863 / 80.114	Complex
`TkA02G052310`	`LXL04_017321`	`JCVI_TKOH_00076`	87.6	98.298 / 85.714	Complex
`TkA02G052460`	`LXL04_017323`	`JCVI_TKOH_00076`	87.7	98.485 / 27.66	Complex
`TkA02G052490`	`LXL04_017322`	`JCVI_TKOH_00076`	86.1	100.0 / 100.0	Review
`TkA02G052530`	`LXL04_017321`	`JCVI_TKOH_00076`	100.0	100.0 / 100.0	Complex
`TkA02G052540`	`LXL04_017320`	`JCVI_TKOH_00076`	97.8	96.108 / 89.205	Complex
`TkA02G052710`	`LXL04_017319`	`JCVI_TKOH_00076`	99.3	97.774 / 68.138	Complex
`TkA02G052760`	`LXL04_017318`	`JCVI_TKOH_00076`	97.7	100.0 / 100.0	Review
`TkA02G053110`	`LXL04_017317`	`JCVI_TKOH_00076`	92.6	93.577 / 75.599	Complex
`TkA02G054370`	`LXL04_017310`	`JCVI_TKOH_00076`	98.8	100.0 / 100.0	Complex
`TkA02G054700`	`LXL04_017320`	`JCVI_TKOH_00076`	96.9	99.487 / 53.409	Review
`TkA02G054790`	`LXL04_017318`	`JCVI_TKOH_00076`	95.6	100.0 / 100.0	Review
`TkA02G054800`	`LXL04_017317`	`JCVI_TKOH_00076`	98.4	100.0 / 94.413	Complex
`TkA02G054920`	`LXL04_017314`	`JCVI_TKOH_00076`	100.0	98.193 / 93.678	Complex
`TkA02G055830`	`LXL04_017310`	`JCVI_TKOH_00076`	99.0	100.0 / 100.0	Complex
`TkA02G056500`	`LXL04_017308`	`JCVI_TKOH_00076`	99.6	99.643 / 99.643	Strict
`TkA02G056570`	`LXL04_017307`	`JCVI_TKOH_00076`	78.8	94.384 / 91.758	Complex
`TkA02G056580`	`LXL04_017306`	`JCVI_TKOH_00076`	99.2	100.0 / 42.244	Review
`TkA02G056590`	`LXL04_017306`	`JCVI_TKOH_00076`	99.0	84.677 / 34.653	Complex
`TkA02G056630`	`LXL04_017304`	`JCVI_TKOH_00076`	95.1	100.0 / 100.0	Strict
`TkA02G056740`	`LXL04_017302`	`JCVI_TKOH_00076`	99.4	100.0 / 78.392	Complex
`TkA02G059760`	`LXL04_017296`	`JCVI_TKOH_00076`	96.4	100.0 / 59.002	Review
`TkA02G059860`	`LXL04_017295`	`JCVI_TKOH_00076`	99.5	100.0 / 100.0	Strict
`TkA02G059870`	`LXL04_017294`	`JCVI_TKOH_00076`	74.5	100.0 / 90.64	Review
`TkA02G060070`	`LXL04_017292`	`JCVI_TKOH_00076`	99.7	100.0 / 100.0	Strict
`TkA02G060210`	`LXL04_017290`	`JCVI_TKOH_00076`	100.0	77.519 / 90.909	Probable
`TkA02G060230`	`LXL04_017289`	`JCVI_TKOH_00076`	99.2	100.0 / 100.0	Complex
`TkA02G060340`	`LXL04_017284`	`JCVI_TKOH_00076`	97.3	100.0 / 100.0	Strict
`TkA02G060350`	`LXL04_017283`	`JCVI_TKOH_00076`	99.3	100.0 / 100.0	Strict
`TkA02G060400`	`LXL04_017282`	`JCVI_TKOH_00076`	99.4	100.0 / 80.243	Review
`TkA02G060410`	`LXL04_017280`	`JCVI_TKOH_00076`	98.4	100.0 / 37.369	Review
`TkA02G060470`	`LXL04_017279`	`JCVI_TKOH_00076`	98.8	100.0 / 97.967	Strict
`TkA02G060800`	`LXL04_017275`	`JCVI_TKOH_00076`	84.3	100.0 / 33.4	Complex
`TkA02G061090`	`LXL04_017273`	`JCVI_TKOH_00076`	96.0	100.0 / 100.0	Strict
`TkA02G061300`	`LXL04_017267`	`JCVI_TKOH_00076`	95.3	100.0 / 100.0	Strict
`TkA02G061870`	`LXL04_017265`	`JCVI_TKOH_00076`	94.3	100.0 / 89.702	Probable
`TkA02G061980`	`LXL04_017263`	`JCVI_TKOH_00076`	99.6	100.0 / 98.081	Complex
`TkA02G061990`	`LXL04_017262`	`JCVI_TKOH_00076`	92.9	100.0 / 100.0	Probable
`TkA02G062450`	`LXL04_017259`	`JCVI_TKOH_00076`	98.6	98.148 / 66.044	Complex
`TkA02G062480`	`LXL04_017258`	`JCVI_TKOH_00076`	98.0	98.662 / 95.765	Complex
`TkA02G062510`	`LXL04_017257`	`JCVI_TKOH_00076`	80.9	100.0 / 59.184	Review
`TkA02G062970`	`LXL04_017256`	`JCVI_TKOH_00076`	97.9	49.742 / 19.734	Complex
`TkA02G063060`	`LXL04_017255`	`JCVI_TKOH_00076`	88.4	76.44 / 73.0	Review
`TkA02G063220`	`LXL04_017253`	`JCVI_TKOH_00076`	87.0	99.401 / 71.787	Review
`TkA02G063250`	`LXL04_017249`	`JCVI_TKOH_00076`	96.9	100.0 / 82.421	Review
`TkA02G063560`	`LXL04_017231`	`JCVI_TKOH_00076`	80.7	99.576 / 77.593	Complex
`TkA02G064230`	`LXL04_017231`	`JCVI_TKOH_00076`	76.8	92.048 / 82.158	Complex
`TkA02G064620`	`LXL04_017238`	`JCVI_TKOH_00076`	66.4	99.515 / 81.766	Complex
`TkA02G064630`	`LXL04_017231`	`JCVI_TKOH_00076`	54.0	91.702 / 82.019	Complex
`TkA02G064710`	`LXL04_017231`	`JCVI_TKOH_00076`	66.9	84.722 / 40.526	Complex
`TkA02G064720`	`LXL04_017243`	`JCVI_TKOH_00076`	98.9	100.0 / 100.0	Strict
`TkA02G064730`	`LXL04_017242`	`JCVI_TKOH_00076`	81.9	100.0 / 100.0	Review
`TkA02G065470`	`LXL04_017227`	`JCVI_TKOH_00076`	72.1	95.117 / 95.625	Complex
`TkA02G065580`	`LXL04_017223`	`JCVI_TKOH_00076`	87.0	100.0 / 100.0	Complex
`TkA02G065610`	`LXL04_017222`	`JCVI_TKOH_00076`	100.0	93.396 / 10.217	Review
`TkA02G065620`	`LXL04_017222`	`JCVI_TKOH_00076`	99.2	100.0 / 86.378	Strict
`TkA02G065710`	`LXL04_017221`	`JCVI_TKOH_00076`	92.0	99.545 / 66.948	Complex
`TkA02G065950`	`LXL04_017217`	`JCVI_TKOH_00076`	66.2	89.697 / 40.145	Complex
`TkA02G066110`	`LXL04_017217`	`JCVI_TKOH_00076`	66.9	59.055 / 44.485	Complex
`TkA02G066200`	`LXL04_017217`	`JCVI_TKOH_00076`	88.3	100.0 / 94.213	Complex
`TkA02G066460`	`LXL04_017217`	`JCVI_TKOH_00076`	88.3	100.0 / 94.213	Complex
`TkA02G066560`	`LXL04_017215`	`JCVI_TKOH_00076`	100.0	100.0 / 100.0	Review
`TkA02G066710`	`LXL04_017194`	`JCVI_TKOH_00076`	78.6	97.973 / 81.25	Complex
`TkA02G066810`	`LXL04_017214`	`JCVI_TKOH_00076`	100.0	97.521 / 90.769	Complex
`TkA02G067010`	`LXL04_017201`	`JCVI_TKOH_00076`	97.3	78.571 / 45.082	Complex
`TkA02G067050`	`LXL04_017210`	`JCVI_TKOH_00076`	100.0	100.0 / 93.151	Complex
`TkA02G067710`	`LXL04_017207`	`JCVI_TKOH_00076`	81.9	100.0 / 100.0	Review
`TkA02G068040`	`LXL04_017215`	`JCVI_TKOH_00076`	96.7	100.0 / 100.0	Complex
`TkA02G068050`	`LXL04_017194`	`JCVI_TKOH_00076`	74.5	65.116 / 79.545	Complex
`TkA02G068190`	`LXL04_017202`	`JCVI_TKOH_00076`	94.6	88.995 / 46.851	Complex
`TkA02G068740`	`LXL04_017194`	`JCVI_TKOH_00076`	89.3	81.522 / 84.659	Complex
`TkA02G069040`	`LXL04_017191`	`JCVI_TKOH_00076`	99.2	100.0 / 100.0	Review
`TkA02G069090`	`LXL04_017190`	`JCVI_TKOH_00076`	90.5	93.889 / 69.262	Complex
`TkA02G069170`	`LXL04_017194`	`JCVI_TKOH_00076`	55.8	55.319 / 57.955	Complex
`TkA02G069180`	`LXL04_017201`	`JCVI_TKOH_00076`	96.7	100.0 / 100.0	Review
`TkA02G069190`	`LXL04_017200`	`JCVI_TKOH_00076`	94.7	100.0 / 99.854	Complex
`TkA02G069260`	`LXL04_017188`	`JCVI_TKOH_00076`	99.7	100.0 / 100.0	Strict
`TkA02G069310`	`LXL04_017185`	`JCVI_TKOH_00076`	99.1	94.737 / 67.5	Complex
`TkA02G069410`	`LXL04_017184`	`JCVI_TKOH_00076`	80.5	25.949 / 17.593	Review
`TkA02G070180`	`LXL04_017178`	`JCVI_TKOH_00076`	100.0	95.73 / 54.125	Review
`TkA02G070290`	`LXL04_017178`	`JCVI_TKOH_00076`	79.3	100.0 / 28.169	Complex
`TkA02G070980`	`LXL04_017184`	`JCVI_TKOH_00076`	82.1	24.375 / 16.667	Complex
`TkA02G071000`	`LXL04_017174`	`JCVI_TKOH_00076`	99.3	100.0 / 87.135	Strict
`TkA02G071140`	`LXL04_017161`	`JCVI_TKOH_00076`	100.0	11.227 / 10.165	Review
`TkA02G071220`	`LXL04_017159`	`JCVI_TKOH_00076`	79.3	100.0 / 26.327	Complex
`TkA02G071330`	`LXL04_017187`	`JCVI_TKOH_00076`	42.8	92.886 / 69.335	Complex
`TkA02G071440`	`LXL04_017158`	`JCVI_TKOH_00076`	88.9	96.452 / 87.023	Review
`TkA02G071540`	`LXL04_017155`	`JCVI_TKOH_00076`	99.0	99.029 / 99.029	Review
`TkA02G072150`	`LXL04_017151`	`JCVI_TKOH_00076`	99.2	100.0 / 49.811	Review
`TkA02G072180`	`LXL04_017151`	`JCVI_TKOH_00076`	99.4	97.856 / 47.448	Review
`TkA02G072580`	`LXL04_017148`	`JCVI_TKOH_00076`	99.4	100.0 / 94.385	Complex
`TkA02G072590`	`LXL04_017147`	`JCVI_TKOH_00076`	99.0	98.891 / 83.311	Strict
`TkA02G072780`	`LXL04_017139`	`JCVI_TKOH_00076`	97.8	100.0 / 99.425	Strict
`TkA02G072810`	`LXL04_017138`	`JCVI_TKOH_00076`	94.5	100.0 / 100.0	Complex
`TkA02G073000`	`LXL04_017137`	`JCVI_TKOH_00076`	93.1	98.886 / 91.389	Complex
`TkA02G073020`	`LXL04_017136`	`JCVI_TKOH_00076`	100.0	100.0 / 100.0	Complex
`TkA02G073140`	`LXL04_017132`	`JCVI_TKOH_00076`	99.4	100.0 / 100.0	Review
`TkA02G073270`	`LXL04_017138`	`JCVI_TKOH_00076`	91.1	100.0 / 100.0	Complex
`TkA02G073380`	`LXL04_017137`	`JCVI_TKOH_00076`	94.2	98.941 / 91.389	Review
`TkA02G073580`	`LXL04_017126`	`JCVI_TKOH_00076`	99.4	100.0 / 100.0	Review
`TkA02G073590`	`LXL04_017125`	`JCVI_TKOH_00076`	98.8	99.507 / 61.46	Complex
`TkA02G073600`	`LXL04_017124`	`JCVI_TKOH_00076`	95.7	100.0 / 100.0	Strict
`TkA02G073950`	`LXL04_017123`	`JCVI_TKOH_00076`	100.0	76.087 / 92.92	Probable
`TkA02G074150`	`LXL04_017120`	`JCVI_TKOH_00076`	99.3	100.0 / 100.0	Strict
`TkA02G074560`	`LXL04_017112`	`JCVI_TKOH_00076`	99.7	100.0 / 100.0	Complex
`TkA02G074570`	`LXL04_017111`	`JCVI_TKOH_00076`	85.3	100.0 / 83.591	Review
`TkA02G074590`	`LXL04_017110`	`JCVI_TKOH_00076`	99.4	100.0 / 69.168	Review
`TkA02G074600`	`LXL04_017110`	`JCVI_TKOH_00076`	96.7	99.338 / 30.426	Review
`TkA02G074620`	`LXL04_017108`	`JCVI_TKOH_00076`	96.0	82.073 / 92.901	Strict
`TkA02G074720`	`LXL04_017106`	`JCVI_TKOH_00076`	98.6	71.5 / 86.145	Probable
`TkA02G074740`	`LXL04_017105`	`JCVI_TKOH_00076`	84.3	79.526 / 39.704	Review
`TkA02G074760`	`LXL04_017104`	`JCVI_TKOH_00076`	99.9	100.0 / 100.0	Strict
`TkA02G075040`	`LXL04_017099`	`JCVI_TKOH_00076`	100.0	100.0 / 100.0	Strict