Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00265

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 107

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00265

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00265 Chr06 8744418-10701395 Chr05 117725418-119512038 mixed High 107 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00265`	Chr06:8744418-10701395	Chr05:117725418-119512038	mixed	107	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 107 · Showing 1–107 · Page 1/1

Download All Anchors TSV

TkA06G032210 → LXL04_025855

99.6%

TkA06G032220 → LXL04_025856

99.7%

TkA06G032640 → LXL04_025861

95.0%

TkA06G032680 → LXL04_025862

94.1%

TkA06G032700 → LXL04_025863

98.3%

TkA06G032950 → LXL04_025866

100.0%

TkA06G033140 → LXL04_025869

99.4%

TkA06G033160 → LXL04_025870

99.7%

TkA06G033170 → LXL04_025871

99.5%

TkA06G033190 → LXL04_025873

100.0%

TkA06G033200 → LXL04_025872

100.0%

TkA06G033210 → LXL04_025874

99.5%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA06G032210`	`LXL04_025855`	`JCVI_TKOH_00265`	99.6	100.0 / 100.0	Complex
`TkA06G032220`	`LXL04_025856`	`JCVI_TKOH_00265`	99.7	100.0 / 100.0	Strict
`TkA06G032640`	`LXL04_025861`	`JCVI_TKOH_00265`	95.0	94.709 / 100.0	Strict
`TkA06G032680`	`LXL04_025862`	`JCVI_TKOH_00265`	94.1	100.0 / 100.0	Probable
`TkA06G032700`	`LXL04_025863`	`JCVI_TKOH_00265`	98.3	100.0 / 91.82	Probable
`TkA06G032950`	`LXL04_025866`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Complex
`TkA06G033140`	`LXL04_025869`	`JCVI_TKOH_00265`	99.4	90.355 / 52.199	Review
`TkA06G033160`	`LXL04_025870`	`JCVI_TKOH_00265`	99.7	100.0 / 100.0	Strict
`TkA06G033170`	`LXL04_025871`	`JCVI_TKOH_00265`	99.5	61.889 / 98.958	Review
`TkA06G033190`	`LXL04_025873`	`JCVI_TKOH_00265`	100.0	35.714 / 100.0	Review
`TkA06G033200`	`LXL04_025872`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G033210`	`LXL04_025874`	`JCVI_TKOH_00265`	99.5	92.166 / 91.324	Strict
`TkA06G033230`	`LXL04_025875`	`JCVI_TKOH_00265`	99.7	100.0 / 100.0	Complex
`TkA06G033260`	`LXL04_025876`	`JCVI_TKOH_00265`	99.7	91.27 / 58.673	Review
`TkA06G033270`	`LXL04_025877`	`JCVI_TKOH_00265`	99.5	100.0 / 100.0	Complex
`TkA06G033310`	`LXL04_025878`	`JCVI_TKOH_00265`	99.9	100.0 / 100.0	Strict
`TkA06G033340`	`LXL04_025879`	`JCVI_TKOH_00265`	99.4	100.0 / 100.0	Strict
`TkA06G033370`	`LXL04_025881`	`JCVI_TKOH_00265`	92.2	100.0 / 100.0	Complex
`TkA06G033510`	`LXL04_025883`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Complex
`TkA06G033560`	`LXL04_025885`	`JCVI_TKOH_00265`	99.3	97.987 / 30.826	Review
`TkA06G033570`	`LXL04_025885`	`JCVI_TKOH_00265`	98.9	91.262 / 9.958	Review
`TkA06G033590`	`LXL04_025885`	`JCVI_TKOH_00265`	76.4	96.234 / 31.886	Complex
`TkA06G033610`	`LXL04_025887`	`JCVI_TKOH_00265`	100.0	68.485 / 21.121	Complex
`TkA06G033620`	`LXL04_025887`	`JCVI_TKOH_00265`	94.7	87.2 / 21.308	Review
`TkA06G033800`	`LXL04_025889`	`JCVI_TKOH_00265`	83.7	81.373 / 9.942	Complex
`TkA06G033820`	`LXL04_025889`	`JCVI_TKOH_00265`	99.4	83.77 / 18.497	Complex
`TkA06G033830`	`LXL04_025890`	`JCVI_TKOH_00265`	100.0	99.083 / 40.074	Review
`TkA06G033850`	`LXL04_025891`	`JCVI_TKOH_00265`	94.1	98.537 / 69.775	Complex
`TkA06G033860`	`LXL04_025892`	`JCVI_TKOH_00265`	96.0	99.636 / 11.017	Review
`TkA06G033870`	`LXL04_025892`	`JCVI_TKOH_00265`	87.3	98.148 / 31.283	Review
`TkA06G033880`	`LXL04_025892`	`JCVI_TKOH_00265`	81.6	93.008 / 17.692	Complex
`TkA06G033890`	`LXL04_025892`	`JCVI_TKOH_00265`	55.7	100.0 / 15.32	Complex
`TkA06G034140`	`LXL04_025892`	`JCVI_TKOH_00265`	59.3	98.63 / 14.314	Complex
`TkA06G034300`	`LXL04_025893`	`JCVI_TKOH_00265`	74.3	93.852 / 28.501	Complex
`TkA06G034620`	`LXL04_025893`	`JCVI_TKOH_00265`	96.1	100.0 / 21.933	Review
`TkA06G034630`	`LXL04_025894`	`JCVI_TKOH_00265`	99.1	98.198 / 17.854	Review
`TkA06G034640`	`LXL04_025895`	`JCVI_TKOH_00265`	98.2	86.316 / 43.968	Review
`TkA06G034660`	`LXL04_025895`	`JCVI_TKOH_00265`	76.9	92.81 / 38.07	Complex
`TkA06G034740`	`LXL04_025900`	`JCVI_TKOH_00265`	99.6	98.502 / 67.263	Review
`TkA06G034760`	`LXL04_025901`	`JCVI_TKOH_00265`	100.0	86.905 / 100.0	Complex
`TkA06G034880`	`LXL04_025903`	`JCVI_TKOH_00265`	95.4	93.21 / 78.51	Complex
`TkA06G034900`	`LXL04_025904`	`JCVI_TKOH_00265`	94.7	99.079 / 83.724	Probable
`TkA06G034980`	`LXL04_025905`	`JCVI_TKOH_00265`	99.6	100.0 / 100.0	Strict
`TkA06G035040`	`LXL04_025905`	`JCVI_TKOH_00265`	99.3	100.0 / 31.513	Review
`TkA06G035750`	`LXL04_025909`	`JCVI_TKOH_00265`	96.8	100.0 / 100.0	Strict
`TkA06G035760`	`LXL04_025910`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G035770`	`LXL04_025911`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G035780`	`LXL04_025912`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G035820`	`LXL04_025913`	`JCVI_TKOH_00265`	93.0	92.991 / 41.237	Complex
`TkA06G035880`	`LXL04_025914`	`JCVI_TKOH_00265`	90.3	100.0 / 56.549	Complex
`TkA06G035890`	`LXL04_025915`	`JCVI_TKOH_00265`	99.7	100.0 / 43.75	Review
`TkA06G035900`	`LXL04_025916`	`JCVI_TKOH_00265`	80.9	76.882 / 20.596	Complex
`TkA06G035910`	`LXL04_025917`	`JCVI_TKOH_00265`	100.0	94.472 / 76.113	Complex
`TkA06G035980`	`LXL04_025918`	`JCVI_TKOH_00265`	99.7	100.0 / 85.47	Strict
`TkA06G035990`	`LXL04_025919`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G036000`	`LXL04_025920`	`JCVI_TKOH_00265`	99.5	100.0 / 100.0	Strict
`TkA06G036190`	`LXL04_025922`	`JCVI_TKOH_00265`	99.8	100.0 / 100.0	Strict
`TkA06G036330`	`LXL04_025923`	`JCVI_TKOH_00265`	98.8	97.804 / 74.903	Probable
`TkA06G036340`	`LXL04_025924`	`JCVI_TKOH_00265`	98.7	100.0 / 89.258	Strict
`TkA06G036350`	`LXL04_025925`	`JCVI_TKOH_00265`	100.0	99.614 / 99.614	Strict
`TkA06G036430`	`LXL04_025927`	`JCVI_TKOH_00265`	99.7	100.0 / 100.0	Complex
`TkA06G036440`	`LXL04_025928`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G036470`	`LXL04_025929`	`JCVI_TKOH_00265`	100.0	100.0 / 74.33	Probable
`TkA06G036570`	`LXL04_025931`	`JCVI_TKOH_00265`	99.9	98.587 / 97.318	Strict
`TkA06G036580`	`LXL04_025932`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Complex
`TkA06G036600`	`LXL04_025933`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G036630`	`LXL04_025934`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G036650`	`LXL04_025936`	`JCVI_TKOH_00265`	93.4	93.78 / 99.487	Complex
`TkA06G036660`	`LXL04_025936`	`JCVI_TKOH_00265`	99.5	100.0 / 100.0	Review
`TkA06G036670`	`LXL04_025937`	`JCVI_TKOH_00265`	93.5	100.0 / 100.0	Probable
`TkA06G036910`	`LXL04_025939`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037080`	`LXL04_025940`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037090`	`LXL04_025942`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037100`	`LXL04_025941`	`JCVI_TKOH_00265`	96.3	43.548 / 23.661	Complex
`TkA06G037110`	`LXL04_025943`	`JCVI_TKOH_00265`	96.0	100.0 / 100.0	Complex
`TkA06G037240`	`LXL04_025945`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037370`	`LXL04_025947`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037480`	`LXL04_025951`	`JCVI_TKOH_00265`	90.4	100.0 / 100.0	Complex
`TkA06G037650`	`LXL04_025952`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037680`	`LXL04_025953`	`JCVI_TKOH_00265`	99.3	99.301 / 100.0	Strict
`TkA06G037710`	`LXL04_025954`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037770`	`LXL04_025955`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G037900`	`LXL04_025957`	`JCVI_TKOH_00265`	98.7	100.0 / 75.0	Probable
`TkA06G037910`	`LXL04_025958`	`JCVI_TKOH_00265`	98.6	100.0 / 38.475	Review
`TkA06G038510`	`LXL04_025970`	`JCVI_TKOH_00265`	99.1	95.833 / 69.697	Complex
`TkA06G038740`	`LXL04_025972`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G038780`	`LXL04_025973`	`JCVI_TKOH_00265`	100.0	99.077 / 51.585	Review
`TkA06G038820`	`LXL04_025974`	`JCVI_TKOH_00265`	99.9	100.0 / 100.0	Complex
`TkA06G038830`	`LXL04_025976`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G038840`	`LXL04_025977`	`JCVI_TKOH_00265`	99.8	100.0 / 100.0	Strict
`TkA06G038860`	`LXL04_025978`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Complex
`TkA06G038870`	`LXL04_025979`	`JCVI_TKOH_00265`	99.8	100.0 / 100.0	Strict
`TkA06G039100`	`LXL04_025981`	`JCVI_TKOH_00265`	99.8	100.0 / 100.0	Strict
`TkA06G039160`	`LXL04_025982`	`JCVI_TKOH_00265`	99.4	95.109 / 100.0	Strict
`TkA06G039200`	`LXL04_025984`	`JCVI_TKOH_00265`	99.4	100.0 / 100.0	Strict
`TkA06G039210`	`LXL04_025985`	`JCVI_TKOH_00265`	99.8	100.0 / 100.0	Strict
`TkA06G039240`	`LXL04_025987`	`JCVI_TKOH_00265`	99.2	74.684 / 93.651	Probable
`TkA06G039310`	`LXL04_025988`	`JCVI_TKOH_00265`	100.0	100.0 / 100.0	Strict
`TkA06G039320`	`LXL04_025989`	`JCVI_TKOH_00265`	99.1	100.0 / 100.0	Strict
`TkA06G039330`	`LXL04_025990`	`JCVI_TKOH_00265`	97.8	100.0 / 99.385	Strict
`TkA06G039340`	`LXL04_025992`	`JCVI_TKOH_00265`	99.4	100.0 / 48.204	Review
`TkA06G039360`	`LXL04_025992`	`JCVI_TKOH_00265`	95.6	98.392 / 47.455	Review
`TkA06G039410`	`LXL04_025992`	`JCVI_TKOH_00265`	72.8	92.157 / 35.18	Complex
`TkA06G039420`	`LXL04_025993`	`JCVI_TKOH_00265`	92.9	100.0 / 100.0	Complex
`TkA06G039440`	`LXL04_025994`	`JCVI_TKOH_00265`	99.1	100.0 / 100.0	Strict
`TkA06G039590`	`LXL04_025997`	`JCVI_TKOH_00265`	95.2	100.0 / 72.27	Review
`TkA06G039600`	`LXL04_025998`	`JCVI_TKOH_00265`	99.7	99.359 / 39.541	Review