同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00155
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 52
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00155

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00155 Chr03 30154511-31233431 Chr05 116203880-117269789 - High 52 anchors
Chr03 30154511-31233431 Chr05 116203880-117269789 JCVI_TKOH_00155 · 52 gene pairs TkA03G118020 | LXL04_025816 | 82.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G118110 | LXL04_025813 | 99.6% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G118680 | LXL04_025810 | 99.8% | multi_source_to_OH1004 | Complex TkA03G118700 | LXL04_025809 | 100.0% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G118710 | LXL04_025808 | 100.0% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G118720 | LXL04_025807 | 99.8% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G118940 | LXL04_025805 | 100.0% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G118950 | LXL04_025804 | 100.0% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G118960 | LXL04_025803 | 99.7% | RBH_high_identity_coverage_local_synteny_minor_chr_pair | Probable TkA03G119020 | LXL04_025802 | 99.7% | multi_source_to_OH1004 | Complex TkA03G119030 | LXL04_025801 | 100.0% | multi_source_to_OH1004 | Complex TkA03G119040 | LXL04_025800 | 98.5% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00155 Chr03:30154511-31233431 Chr05:116203880-117269789 - 52 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 52 · 当前范围 1–52 · 页码 1/1

TkA03G118020 → LXL04_025816
82.0%
TkA03G118110 → LXL04_025813
99.6%
TkA03G118680 → LXL04_025810
99.8%
TkA03G118700 → LXL04_025809
100.0%
TkA03G118710 → LXL04_025808
100.0%
TkA03G118720 → LXL04_025807
99.8%
TkA03G118940 → LXL04_025805
100.0%
TkA03G118950 → LXL04_025804
100.0%
TkA03G118960 → LXL04_025803
99.7%
TkA03G119020 → LXL04_025802
99.7%
TkA03G119030 → LXL04_025801
100.0%
TkA03G119040 → LXL04_025800
98.5%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA03G118020LXL04_025816JCVI_TKOH_0015582.0100.0 / 72.119待复核
TkA03G118110LXL04_025813JCVI_TKOH_0015599.6100.0 / 100.0Probable
TkA03G118680LXL04_025810JCVI_TKOH_0015599.8100.0 / 100.0Complex
TkA03G118700LXL04_025809JCVI_TKOH_00155100.0100.0 / 100.0Probable
TkA03G118710LXL04_025808JCVI_TKOH_00155100.0100.0 / 96.165Probable
TkA03G118720LXL04_025807JCVI_TKOH_0015599.8100.0 / 100.0Probable
TkA03G118940LXL04_025805JCVI_TKOH_00155100.0100.0 / 100.0Probable
TkA03G118950LXL04_025804JCVI_TKOH_00155100.099.819 / 99.819Probable
TkA03G118960LXL04_025803JCVI_TKOH_0015599.7100.0 / 100.0Probable
TkA03G119020LXL04_025802JCVI_TKOH_0015599.7100.0 / 100.0Complex
TkA03G119030LXL04_025801JCVI_TKOH_00155100.0100.0 / 100.0Complex
TkA03G119040LXL04_025800JCVI_TKOH_0015598.593.593 / 50.149待复核
TkA03G119070LXL04_025798JCVI_TKOH_00155100.0100.0 / 31.671待复核
TkA03G119080LXL04_025798JCVI_TKOH_0015590.796.957 / 54.64Complex
TkA03G119120LXL04_025797JCVI_TKOH_0015597.3100.0 / 77.406Complex
TkA03G119200LXL04_025793JCVI_TKOH_00155100.097.34 / 89.926Probable
TkA03G119340LXL04_025791JCVI_TKOH_0015599.496.328 / 94.46Complex
TkA03G119400LXL04_025790JCVI_TKOH_00155100.096.399 / 96.399Complex
TkA03G119460LXL04_025787JCVI_TKOH_0015596.7100.0 / 49.793待复核
TkA03G119590LXL04_025785JCVI_TKOH_00155100.099.242 / 27.406待复核
TkA03G119760LXL04_025781JCVI_TKOH_0015565.8100.0 / 67.064Complex
TkA03G119770LXL04_025780JCVI_TKOH_0015599.3100.0 / 100.0待复核
TkA03G119780LXL04_025779JCVI_TKOH_00155100.0100.0 / 100.0Complex
TkA03G119790LXL04_025778JCVI_TKOH_00155100.0100.0 / 100.0Complex
TkA03G119800LXL04_025777JCVI_TKOH_00155100.096.789 / 27.818待复核
TkA03G119810LXL04_025777JCVI_TKOH_0015596.693.367 / 36.585待复核
TkA03G119820LXL04_025777JCVI_TKOH_0015584.995.5 / 29.334Complex
TkA03G119830LXL04_025776JCVI_TKOH_0015589.5100.0 / 100.0Complex
TkA03G119870LXL04_025774JCVI_TKOH_0015599.6100.0 / 100.0待复核
TkA03G119900LXL04_025773JCVI_TKOH_0015599.299.016 / 84.594Complex
TkA03G119910LXL04_025771JCVI_TKOH_00155100.0100.0 / 100.0待复核
TkA03G119940LXL04_025770JCVI_TKOH_0015599.4100.0 / 100.0Probable
TkA03G119960LXL04_025769JCVI_TKOH_0015597.481.277 / 25.365Complex
TkA03G120150LXL04_025767JCVI_TKOH_0015597.686.55 / 29.96待复核
TkA03G120170LXL04_025766JCVI_TKOH_0015599.2100.0 / 46.14待复核
TkA03G120190LXL04_025765JCVI_TKOH_0015594.197.579 / 60.242待复核
TkA03G120200LXL04_025764JCVI_TKOH_00155100.0100.0 / 97.674Complex
TkA03G120220LXL04_025763JCVI_TKOH_00155100.092.149 / 59.626待复核
TkA03G120270LXL04_025762JCVI_TKOH_00155100.0100.0 / 42.08待复核
TkA03G120300LXL04_025761JCVI_TKOH_00155100.0100.0 / 100.0Complex
TkA03G120320LXL04_025760JCVI_TKOH_00155100.0100.0 / 100.0Complex
TkA03G120360LXL04_025758JCVI_TKOH_00155100.0100.0 / 100.0Probable
TkA03G120370LXL04_025757JCVI_TKOH_00155100.0100.0 / 100.0待复核
TkA03G120400LXL04_025756JCVI_TKOH_00155100.0100.0 / 100.0待复核
TkA03G120660LXL04_025754JCVI_TKOH_0015599.6100.0 / 100.0Complex
TkA03G120910LXL04_025752JCVI_TKOH_0015599.7100.0 / 100.0待复核
TkA03G120930LXL04_025751JCVI_TKOH_0015599.5100.0 / 100.0Complex
TkA03G120940LXL04_025749JCVI_TKOH_0015595.0100.0 / 100.0Complex
TkA03G121620LXL04_025745JCVI_TKOH_0015598.499.457 / 100.0Complex
TkA03G122010LXL04_025744JCVI_TKOH_0015595.399.156 / 71.646Complex
TkA03G122130LXL04_025743JCVI_TKOH_0015549.551.429 / 59.104Complex
TkA03G122150LXL04_025742JCVI_TKOH_0015598.195.0 / 83.912Complex