Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00191

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 172

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00191

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00191 Chr04 24186028-30293281 Chr08 26906694-32895803 mixed High 172 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00191`	Chr04:24186028-30293281	Chr08:26906694-32895803	mixed	172	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 172 · Showing 1–172 · Page 1/1

Download All Anchors TSV

TkA04G092740 → LXL04_035957

72.3%

TkA04G092760 → LXL04_035955

97.3%

TkA04G092810 → LXL04_035954

100.0%

TkA04G092840 → LXL04_035953

93.8%

TkA04G092850 → LXL04_035952

99.3%

TkA04G093290 → LXL04_035950

100.0%

TkA04G093450 → LXL04_035949

100.0%

TkA04G094040 → LXL04_035948

100.0%

TkA04G094240 → LXL04_035947

99.7%

TkA04G094360 → LXL04_035945

100.0%

TkA04G094380 → LXL04_035944

99.5%

TkA04G094390 → LXL04_035943

99.8%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA04G092740`	`LXL04_035957`	`JCVI_TKOH_00191`	72.3	98.361 / 35.818	Review
`TkA04G092760`	`LXL04_035955`	`JCVI_TKOH_00191`	97.3	94.805 / 98.19	Review
`TkA04G092810`	`LXL04_035954`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G092840`	`LXL04_035953`	`JCVI_TKOH_00191`	93.8	100.0 / 100.0	Complex
`TkA04G092850`	`LXL04_035952`	`JCVI_TKOH_00191`	99.3	100.0 / 100.0	Strict
`TkA04G093290`	`LXL04_035950`	`JCVI_TKOH_00191`	100.0	100.0 / 47.04	Review
`TkA04G093450`	`LXL04_035949`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G094040`	`LXL04_035948`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G094240`	`LXL04_035947`	`JCVI_TKOH_00191`	99.7	99.077 / 50.0	Review
`TkA04G094360`	`LXL04_035945`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G094380`	`LXL04_035944`	`JCVI_TKOH_00191`	99.5	96.629 / 91.295	Complex
`TkA04G094390`	`LXL04_035943`	`JCVI_TKOH_00191`	99.8	100.0 / 100.0	Complex
`TkA04G094400`	`LXL04_035942`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G094450`	`LXL04_035939`	`JCVI_TKOH_00191`	94.7	100.0 / 100.0	Probable
`TkA04G095110`	`LXL04_035938`	`JCVI_TKOH_00191`	99.7	100.0 / 100.0	Strict
`TkA04G095130`	`LXL04_035937`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G095190`	`LXL04_035936`	`JCVI_TKOH_00191`	97.9	97.521 / 61.299	Review
`TkA04G095420`	`LXL04_035933`	`JCVI_TKOH_00191`	94.0	97.927 / 96.618	Probable
`TkA04G095640`	`LXL04_035929`	`JCVI_TKOH_00191`	98.4	100.0 / 25.413	Review
`TkA04G095650`	`LXL04_035929`	`JCVI_TKOH_00191`	99.2	99.213 / 26.033	Review
`TkA04G095660`	`LXL04_035928`	`JCVI_TKOH_00191`	99.2	100.0 / 22.939	Review
`TkA04G095880`	`LXL04_035926`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G096320`	`LXL04_035925`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G096330`	`LXL04_035924`	`JCVI_TKOH_00191`	99.6	99.801 / 83.113	Strict
`TkA04G096360`	`LXL04_035922`	`JCVI_TKOH_00191`	96.0	100.0 / 100.0	Strict
`TkA04G096380`	`LXL04_035921`	`JCVI_TKOH_00191`	100.0	85.47 / 30.303	Review
`TkA04G096680`	`LXL04_035918`	`JCVI_TKOH_00191`	93.6	72.667 / 26.65	Complex
`TkA04G096730`	`LXL04_035917`	`JCVI_TKOH_00191`	97.1	100.0 / 100.0	Strict
`TkA04G096790`	`LXL04_035916`	`JCVI_TKOH_00191`	96.4	100.0 / 98.585	Strict
`TkA04G096890`	`LXL04_035915`	`JCVI_TKOH_00191`	88.2	98.45 / 97.297	Review
`TkA04G097150`	`LXL04_035909`	`JCVI_TKOH_00191`	95.6	90.411 / 83.492	Strict
`TkA04G097960`	`LXL04_035904`	`JCVI_TKOH_00191`	97.6	100.0 / 84.016	Review
`TkA04G098030`	`LXL04_035903`	`JCVI_TKOH_00191`	98.4	100.0 / 56.889	Review
`TkA04G098040`	`LXL04_035902`	`JCVI_TKOH_00191`	84.4	100.0 / 52.632	Review
`TkA04G098080`	`LXL04_035899`	`JCVI_TKOH_00191`	98.9	100.0 / 41.535	Review
`TkA04G098140`	`LXL04_035897`	`JCVI_TKOH_00191`	100.0	76.923 / 62.5	Review
`TkA04G098550`	`LXL04_035895`	`JCVI_TKOH_00191`	99.7	100.0 / 87.613	Review
`TkA04G098610`	`LXL04_035893`	`JCVI_TKOH_00191`	95.6	100.0 / 95.745	Review
`TkA04G098630`	`LXL04_035892`	`JCVI_TKOH_00191`	99.8	100.0 / 100.0	Strict
`TkA04G098760`	`LXL04_035891`	`JCVI_TKOH_00191`	99.4	97.414 / 78.472	Probable
`TkA04G098780`	`LXL04_035890`	`JCVI_TKOH_00191`	99.7	100.0 / 100.0	Strict
`TkA04G099430`	`LXL04_035886`	`JCVI_TKOH_00191`	99.2	100.0 / 89.706	Complex
`TkA04G099480`	`LXL04_035885`	`JCVI_TKOH_00191`	100.0	88.167 / 78.512	Complex
`TkA04G099490`	`LXL04_035884`	`JCVI_TKOH_00191`	100.0	96.947 / 76.97	Complex
`TkA04G099520`	`LXL04_035883`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Review
`TkA04G099530`	`LXL04_035882`	`JCVI_TKOH_00191`	85.0	100.0 / 100.0	Complex
`TkA04G100420`	`LXL04_035880`	`JCVI_TKOH_00191`	100.0	99.381 / 92.775	Complex
`TkA04G100940`	`LXL04_035878`	`JCVI_TKOH_00191`	94.7	100.0 / 100.0	Probable
`TkA04G100960`	`LXL04_035877`	`JCVI_TKOH_00191`	95.0	100.0 / 100.0	Complex
`TkA04G100970`	`LXL04_035876`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G101040`	`LXL04_035873`	`JCVI_TKOH_00191`	89.8	100.0 / 100.0	Review
`TkA04G101070`	`LXL04_035871`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G101080`	`LXL04_035870`	`JCVI_TKOH_00191`	97.7	100.0 / 100.0	Review
`TkA04G101130`	`LXL04_035869`	`JCVI_TKOH_00191`	100.0	100.0 / 99.225	Strict
`TkA04G101810`	`LXL04_035865`	`JCVI_TKOH_00191`	98.2	100.0 / 95.798	Strict
`TkA04G102040`	`LXL04_035864`	`JCVI_TKOH_00191`	99.5	100.0 / 100.0	Strict
`TkA04G102070`	`LXL04_035863`	`JCVI_TKOH_00191`	99.2	100.0 / 83.189	Complex
`TkA04G102080`	`LXL04_035862`	`JCVI_TKOH_00191`	99.6	100.0 / 82.903	Complex
`TkA04G102100`	`LXL04_035861`	`JCVI_TKOH_00191`	99.2	99.379 / 96.192	Strict
`TkA04G102220`	`LXL04_035860`	`JCVI_TKOH_00191`	99.8	99.823 / 79.549	Probable
`TkA04G102250`	`LXL04_035859`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G102440`	`LXL04_035857`	`JCVI_TKOH_00191`	93.9	100.0 / 100.0	Complex
`TkA04G102450`	`LXL04_035856`	`JCVI_TKOH_00191`	99.5	92.402 / 31.234	Review
`TkA04G102460`	`LXL04_035854`	`JCVI_TKOH_00191`	93.6	100.0 / 100.0	Complex
`TkA04G102620`	`LXL04_035853`	`JCVI_TKOH_00191`	97.3	100.0 / 96.522	Strict
`TkA04G102850`	`LXL04_035850`	`JCVI_TKOH_00191`	87.6	90.964 / 37.592	Complex
`TkA04G102860`	`LXL04_035849`	`JCVI_TKOH_00191`	92.6	97.436 / 26.536	Review
`TkA04G102870`	`LXL04_035849`	`JCVI_TKOH_00191`	51.7	98.291 / 11.872	Complex
`TkA04G102880`	`LXL04_035848`	`JCVI_TKOH_00191`	98.7	89.438 / 75.954	Complex
`TkA04G102910`	`LXL04_035847`	`JCVI_TKOH_00191`	99.7	100.0 / 66.466	Complex
`TkA04G102960`	`LXL04_035845`	`JCVI_TKOH_00191`	99.1	83.15 / 100.0	Complex
`TkA04G103180`	`LXL04_035842`	`JCVI_TKOH_00191`	99.8	94.966 / 62.974	Complex
`TkA04G103250`	`LXL04_035839`	`JCVI_TKOH_00191`	98.9	100.0 / 100.0	Review
`TkA04G103420`	`LXL04_035837`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G103460`	`LXL04_035836`	`JCVI_TKOH_00191`	100.0	100.0 / 77.545	Probable
`TkA04G104090`	`LXL04_035834`	`JCVI_TKOH_00191`	99.5	99.848 / 99.697	Strict
`TkA04G104890`	`LXL04_035828`	`JCVI_TKOH_00191`	95.1	100.0 / 100.0	Strict
`TkA04G104970`	`LXL04_035827`	`JCVI_TKOH_00191`	98.1	90.525 / 22.626	Review
`TkA04G105150`	`LXL04_035826`	`JCVI_TKOH_00191`	98.7	95.706 / 100.0	Strict
`TkA04G105890`	`LXL04_035823`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G106020`	`LXL04_035815`	`JCVI_TKOH_00191`	77.4	87.687 / 46.063	Complex
`TkA04G106070`	`LXL04_035814`	`JCVI_TKOH_00191`	99.0	100.0 / 100.0	Complex
`TkA04G106190`	`LXL04_035815`	`JCVI_TKOH_00191`	92.4	100.0 / 97.835	Complex
`TkA04G106210`	`LXL04_035814`	`JCVI_TKOH_00191`	99.2	100.0 / 100.0	Review
`TkA04G106230`	`LXL04_035815`	`JCVI_TKOH_00191`	93.3	100.0 / 100.0	Complex
`TkA04G106330`	`LXL04_035809`	`JCVI_TKOH_00191`	93.2	93.519 / 93.578	Complex
`TkA04G106490`	`LXL04_035808`	`JCVI_TKOH_00191`	96.9	100.0 / 100.0	Strict
`TkA04G107000`	`LXL04_035807`	`JCVI_TKOH_00191`	81.1	94.737 / 30.841	Complex
`TkA04G107350`	`LXL04_035806`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G107370`	`LXL04_035805`	`JCVI_TKOH_00191`	98.8	100.0 / 86.441	Strict
`TkA04G107460`	`LXL04_035803`	`JCVI_TKOH_00191`	98.4	100.0 / 95.611	Strict
`TkA04G107480`	`LXL04_035802`	`JCVI_TKOH_00191`	99.7	100.0 / 100.0	Strict
`TkA04G107780`	`LXL04_035801`	`JCVI_TKOH_00191`	80.9	100.0 / 67.236	Complex
`TkA04G107860`	`LXL04_035800`	`JCVI_TKOH_00191`	99.6	100.0 / 93.296	Strict
`TkA04G107870`	`LXL04_035799`	`JCVI_TKOH_00191`	89.2	95.103 / 49.134	Review
`TkA04G108150`	`LXL04_035795`	`JCVI_TKOH_00191`	99.3	100.0 / 83.673	Strict
`TkA04G108400`	`LXL04_035794`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G108430`	`LXL04_035791`	`JCVI_TKOH_00191`	100.0	100.0 / 64.2	Complex
`TkA04G108570`	`LXL04_035789`	`JCVI_TKOH_00191`	97.0	100.0 / 54.0	Review
`TkA04G108950`	`LXL04_035785`	`JCVI_TKOH_00191`	95.1	100.0 / 100.0	Complex
`TkA04G108960`	`LXL04_035785`	`JCVI_TKOH_00191`	93.7	100.0 / 77.978	Complex
`TkA04G108970`	`LXL04_035785`	`JCVI_TKOH_00191`	93.7	100.0 / 77.978	Complex
`TkA04G109380`	`LXL04_035782`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G109390`	`LXL04_035781`	`JCVI_TKOH_00191`	99.7	100.0 / 100.0	Strict
`TkA04G109400`	`LXL04_035780`	`JCVI_TKOH_00191`	99.4	100.0 / 100.0	Strict
`TkA04G109420`	`LXL04_035779`	`JCVI_TKOH_00191`	93.4	99.679 / 58.077	Review
`TkA04G109470`	`LXL04_035778`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G109490`	`LXL04_035776`	`JCVI_TKOH_00191`	98.7	100.0 / 100.0	Strict
`TkA04G109550`	`LXL04_035775`	`JCVI_TKOH_00191`	90.8	99.189 / 41.341	Complex
`TkA04G109560`	`LXL04_035775`	`JCVI_TKOH_00191`	99.8	96.639 / 53.538	Review
`TkA04G109660`	`LXL04_035773`	`JCVI_TKOH_00191`	97.5	100.0 / 100.0	Review
`TkA04G109670`	`LXL04_035771`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G109710`	`LXL04_035769`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G109760`	`LXL04_035768`	`JCVI_TKOH_00191`	97.3	100.0 / 100.0	Complex
`TkA04G109770`	`LXL04_035767`	`JCVI_TKOH_00191`	99.3	100.0 / 100.0	Complex
`TkA04G109840`	`LXL04_035766`	`JCVI_TKOH_00191`	100.0	84.492 / 55.634	Review
`TkA04G109910`	`LXL04_035765`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G109920`	`LXL04_035764`	`JCVI_TKOH_00191`	100.0	86.719 / 55.224	Review
`TkA04G109950`	`LXL04_035763`	`JCVI_TKOH_00191`	92.4	100.0 / 100.0	Probable
`TkA04G110170`	`LXL04_035762`	`JCVI_TKOH_00191`	99.9	100.0 / 100.0	Strict
`TkA04G110180`	`LXL04_035761`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G110200`	`LXL04_035760`	`JCVI_TKOH_00191`	99.7	66.383 / 44.571	Review
`TkA04G110240`	`LXL04_035759`	`JCVI_TKOH_00191`	99.1	100.0 / 100.0	Strict
`TkA04G110270`	`LXL04_035758`	`JCVI_TKOH_00191`	100.0	95.283 / 81.452	Strict
`TkA04G110390`	`LXL04_035757`	`JCVI_TKOH_00191`	99.0	100.0 / 100.0	Review
`TkA04G110500`	`LXL04_035757`	`JCVI_TKOH_00191`	99.0	100.0 / 100.0	Review
`TkA04G110920`	`LXL04_035751`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G111460`	`LXL04_035745`	`JCVI_TKOH_00191`	100.0	99.729 / 43.345	Review
`TkA04G111660`	`LXL04_035743`	`JCVI_TKOH_00191`	99.2	99.629 / 96.745	Complex
`TkA04G111670`	`LXL04_035741`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G112180`	`LXL04_035738`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G112190`	`LXL04_035737`	`JCVI_TKOH_00191`	98.0	73.529 / 59.289	Review
`TkA04G112230`	`LXL04_035735`	`JCVI_TKOH_00191`	99.0	100.0 / 100.0	Review
`TkA04G112310`	`LXL04_035735`	`JCVI_TKOH_00191`	99.0	100.0 / 100.0	Complex
`TkA04G112920`	`LXL04_035732`	`JCVI_TKOH_00191`	99.7	100.0 / 100.0	Strict
`TkA04G113050`	`LXL04_035730`	`JCVI_TKOH_00191`	99.8	100.0 / 88.196	Complex
`TkA04G113450`	`LXL04_035729`	`JCVI_TKOH_00191`	96.1	100.0 / 100.0	Strict
`TkA04G113480`	`LXL04_035728`	`JCVI_TKOH_00191`	99.3	100.0 / 100.0	Strict
`TkA04G113500`	`LXL04_035727`	`JCVI_TKOH_00191`	99.2	100.0 / 100.0	Strict
`TkA04G113610`	`LXL04_035724`	`JCVI_TKOH_00191`	95.7	98.893 / 61.136	Review
`TkA04G113620`	`LXL04_035723`	`JCVI_TKOH_00191`	99.7	100.0 / 90.379	Strict
`TkA04G113650`	`LXL04_035722`	`JCVI_TKOH_00191`	94.7	100.0 / 100.0	Probable
`TkA04G113670`	`LXL04_035720`	`JCVI_TKOH_00191`	98.6	100.0 / 100.0	Strict
`TkA04G113690`	`LXL04_035718`	`JCVI_TKOH_00191`	98.1	100.0 / 100.0	Strict
`TkA04G113790`	`LXL04_035717`	`JCVI_TKOH_00191`	99.6	86.364 / 100.0	Strict
`TkA04G113820`	`LXL04_035716`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Complex
`TkA04G114280`	`LXL04_035713`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G114290`	`LXL04_035712`	`JCVI_TKOH_00191`	100.0	97.763 / 97.763	Review
`TkA04G114300`	`LXL04_035711`	`JCVI_TKOH_00191`	97.4	100.0 / 95.639	Complex
`TkA04G114330`	`LXL04_035709`	`JCVI_TKOH_00191`	99.7	99.736 / 77.778	Probable
`TkA04G114340`	`LXL04_035708`	`JCVI_TKOH_00191`	97.6	100.0 / 87.958	Complex
`TkA04G114380`	`LXL04_035707`	`JCVI_TKOH_00191`	97.5	95.364 / 80.515	Complex
`TkA04G114470`	`LXL04_035704`	`JCVI_TKOH_00191`	100.0	87.387 / 61.006	Review
`TkA04G114500`	`LXL04_035703`	`JCVI_TKOH_00191`	96.5	86.667 / 27.135	Review
`TkA04G114550`	`LXL04_035703`	`JCVI_TKOH_00191`	61.2	92.683 / 26.376	Complex
`TkA04G114570`	`LXL04_035701`	`JCVI_TKOH_00191`	56.1	98.649 / 13.542	Complex
`TkA04G114660`	`LXL04_035701`	`JCVI_TKOH_00191`	72.5	85.458 / 39.015	Complex
`TkA04G114670`	`LXL04_035701`	`JCVI_TKOH_00191`	98.1	91.315 / 34.659	Review
`TkA04G114680`	`LXL04_035700`	`JCVI_TKOH_00191`	99.1	90.652 / 47.548	Review
`TkA04G114950`	`LXL04_035698`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G115570`	`LXL04_035691`	`JCVI_TKOH_00191`	99.3	100.0 / 100.0	Strict
`TkA04G115590`	`LXL04_035688`	`JCVI_TKOH_00191`	99.0	100.0 / 100.0	Strict
`TkA04G115680`	`LXL04_035687`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G115740`	`LXL04_035686`	`JCVI_TKOH_00191`	77.1	97.214 / 57.274	Complex
`TkA04G115900`	`LXL04_035686`	`JCVI_TKOH_00191`	76.5	92.547 / 55.617	Complex
`TkA04G115940`	`LXL04_035686`	`JCVI_TKOH_00191`	98.7	97.188 / 57.274	Review
`TkA04G116030`	`LXL04_035685`	`JCVI_TKOH_00191`	99.6	95.638 / 100.0	Strict
`TkA04G116320`	`LXL04_035682`	`JCVI_TKOH_00191`	99.1	100.0 / 100.0	Review
`TkA04G116340`	`LXL04_035681`	`JCVI_TKOH_00191`	100.0	99.775 / 49.498	Review
`TkA04G116350`	`LXL04_035681`	`JCVI_TKOH_00191`	99.5	98.879 / 49.164	Review
`TkA04G116460`	`LXL04_035679`	`JCVI_TKOH_00191`	100.0	100.0 / 100.0	Strict
`TkA04G116530`	`LXL04_035678`	`JCVI_TKOH_00191`	99.3	99.821 / 97.038	Strict