同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00097
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 58
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00097

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00097 Chr02 145800164-147650365 Chr03 10533941-12119470 mixed High 58 anchors
Chr02 145800164-147650365 Chr03 10533941-12119470 JCVI_TKOH_00097 · 58 gene pairs TkA02G565750 | LXL04_012423 | 95.3% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA02G565760 | LXL04_012422 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G565930 | LXL04_012421 | 99.2% | multi_source_to_OH1004 | Complex TkA02G565940 | LXL04_012420 | 95.1% | multi_source_to_OH1004 | Complex TkA02G566370 | LXL04_012414 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA02G566480 | LXL04_012413 | 95.8% | multi_source_to_OH1004 | Complex TkA02G566490 | LXL04_012412 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G566510 | LXL04_012411 | 49.3% | multi_source_to_OH1004 | Complex TkA02G566520 | LXL04_012411 | 66.7% | multi_source_to_OH1004 | Complex TkA02G566770 | LXL04_012410 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA02G566780 | LXL04_012409 | 99.9% | multi_source_to_OH1004 | Complex TkA02G566790 | LXL04_012408 | 100.0% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00097 Chr02:145800164-147650365 Chr03:10533941-12119470 mixed 58 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 58 · 当前范围 1–58 · 页码 1/1

TkA02G565750 → LXL04_012423
95.3%
TkA02G565760 → LXL04_012422
100.0%
TkA02G565930 → LXL04_012421
99.2%
TkA02G565940 → LXL04_012420
95.1%
TkA02G566370 → LXL04_012414
99.6%
TkA02G566480 → LXL04_012413
95.8%
TkA02G566490 → LXL04_012412
100.0%
TkA02G566510 → LXL04_012411
49.3%
TkA02G566520 → LXL04_012411
66.7%
TkA02G566770 → LXL04_012410
100.0%
TkA02G566780 → LXL04_012409
99.9%
TkA02G566790 → LXL04_012408
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA02G565750LXL04_012423JCVI_TKOH_0009795.399.845 / 99.848待复核
TkA02G565760LXL04_012422JCVI_TKOH_00097100.0100.0 / 100.0待复核
TkA02G565930LXL04_012421JCVI_TKOH_0009799.292.537 / 76.074Complex
TkA02G565940LXL04_012420JCVI_TKOH_0009795.1100.0 / 81.053Complex
TkA02G566370LXL04_012414JCVI_TKOH_0009799.6100.0 / 100.0Strict
TkA02G566480LXL04_012413JCVI_TKOH_0009795.8100.0 / 100.0Complex
TkA02G566490LXL04_012412JCVI_TKOH_00097100.0100.0 / 100.0待复核
TkA02G566510LXL04_012411JCVI_TKOH_0009749.387.356 / 72.757Complex
TkA02G566520LXL04_012411JCVI_TKOH_0009766.7100.0 / 68.771Complex
TkA02G566770LXL04_012410JCVI_TKOH_00097100.0100.0 / 100.0待复核
TkA02G566780LXL04_012409JCVI_TKOH_0009799.9100.0 / 99.728Complex
TkA02G566790LXL04_012408JCVI_TKOH_00097100.0100.0 / 100.0待复核
TkA02G566820LXL04_012407JCVI_TKOH_0009799.399.296 / 35.696待复核
TkA02G566890LXL04_012407JCVI_TKOH_0009799.984.179 / 44.114待复核
TkA02G566940LXL04_012406JCVI_TKOH_0009799.8100.0 / 100.0Complex
TkA02G567040LXL04_012404JCVI_TKOH_0009799.492.982 / 100.0待复核
TkA02G567050LXL04_012403JCVI_TKOH_0009766.9100.0 / 100.0待复核
TkA02G567060LXL04_012402JCVI_TKOH_0009799.9100.0 / 100.0Strict
TkA02G567520LXL04_012398JCVI_TKOH_0009799.7100.0 / 100.0Complex
TkA02G567530LXL04_012396JCVI_TKOH_0009765.697.806 / 78.903Complex
TkA02G567570LXL04_012393JCVI_TKOH_00097100.066.667 / 28.715Complex
TkA02G567580LXL04_012392JCVI_TKOH_0009796.693.814 / 99.846Complex
TkA02G567600LXL04_012391JCVI_TKOH_0009785.0100.0 / 100.0Complex
TkA02G567610LXL04_012390JCVI_TKOH_00097100.0100.0 / 100.0Complex
TkA02G567710LXL04_012389JCVI_TKOH_0009799.6100.0 / 100.0Complex
TkA02G567720LXL04_012388JCVI_TKOH_0009798.093.795 / 87.528Complex
TkA02G568020LXL04_012382JCVI_TKOH_0009783.9100.0 / 96.0Complex
TkA02G568030LXL04_012381JCVI_TKOH_0009799.798.726 / 66.81Complex
TkA02G568080LXL04_012379JCVI_TKOH_0009799.466.288 / 23.026Complex
TkA02G568100LXL04_012378JCVI_TKOH_0009798.396.648 / 57.033待复核
TkA02G568660LXL04_012377JCVI_TKOH_0009799.7100.0 / 83.457Complex
TkA02G569120LXL04_012375JCVI_TKOH_00097100.095.213 / 89.055Complex
TkA02G569320LXL04_012372JCVI_TKOH_0009798.6100.0 / 100.0Complex
TkA02G569330LXL04_012371JCVI_TKOH_0009798.190.864 / 54.118待复核
TkA02G569400LXL04_012370JCVI_TKOH_0009794.698.667 / 98.835Complex
TkA02G569780LXL04_012368JCVI_TKOH_00097100.0100.0 / 100.0Complex
TkA02G569860LXL04_012367JCVI_TKOH_0009799.4100.0 / 100.0Complex
TkA02G569890LXL04_012366JCVI_TKOH_00097100.0100.0 / 100.0Complex
TkA02G569930LXL04_012365JCVI_TKOH_0009798.4100.0 / 100.0Complex
TkA02G569940LXL04_012363JCVI_TKOH_00097100.0100.0 / 100.0Complex
TkA02G570560LXL04_012362JCVI_TKOH_0009799.4100.0 / 100.0待复核
TkA02G570700LXL04_012359JCVI_TKOH_00097100.0100.0 / 100.0Complex
TkA02G570970LXL04_012356JCVI_TKOH_0009797.899.458 / 100.0Complex
TkA02G570990LXL04_012355JCVI_TKOH_00097100.0100.0 / 100.0Complex
TkA02G571040LXL04_012353JCVI_TKOH_0009799.4100.0 / 100.0Complex
TkA02G571050LXL04_012352JCVI_TKOH_0009793.5100.0 / 100.0Complex
TkA02G571110LXL04_012351JCVI_TKOH_0009797.7100.0 / 100.0Strict
TkA02G571120LXL04_012349JCVI_TKOH_0009790.1100.0 / 56.612Complex
TkA02G571190LXL04_012349JCVI_TKOH_0009771.197.927 / 79.132Complex
TkA02G571290LXL04_012343JCVI_TKOH_0009795.7100.0 / 100.0Strict
TkA02G571380LXL04_012340JCVI_TKOH_0009785.899.425 / 48.67待复核
TkA02G571390LXL04_012339JCVI_TKOH_0009791.9100.0 / 100.0Probable
TkA02G571450LXL04_012341JCVI_TKOH_0009796.3100.0 / 93.182Strict
TkA02G571480LXL04_012340JCVI_TKOH_0009786.592.157 / 33.245Complex
TkA02G571720LXL04_012335JCVI_TKOH_0009781.696.721 / 82.645Complex
TkA02G571730LXL04_012334JCVI_TKOH_00097100.0100.0 / 100.0Strict
TkA02G571760LXL04_012333JCVI_TKOH_0009799.197.468 / 48.993待复核
TkA02G571770LXL04_012333JCVI_TKOH_0009799.699.588 / 51.22待复核