同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00046
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 39
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00046

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00046 Chr01 42535681-43801504 Chr03 10859347-11832572 mixed High 39 anchors
Chr01 42535681-43801504 Chr03 10859347-11832572 JCVI_TKOH_00046 · 39 gene pairs TkA01G166350 | LXL04_012413 | 96.3% | multi_source_to_OH1004 | Complex TkA01G166360 | LXL04_012412 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G166380 | LXL04_012411 | 49.3% | multi_source_to_OH1004 | Complex TkA01G166410 | LXL04_012411 | 67.9% | multi_source_to_OH1004 | Complex TkA01G166820 | LXL04_012410 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G166840 | LXL04_012409 | 99.9% | multi_source_to_OH1004 | Complex TkA01G166850 | LXL04_012408 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G166860 | LXL04_012407 | 99.5% | sequence_supported_annotation_or_model_conflict | Review TkA01G166880 | LXL04_012407 | 99.0% | non_reciprocal_best_hit | Complex TkA01G167040 | LXL04_012406 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA01G167150 | LXL04_012404 | 92.8% | multi_source_to_OH1004 | Complex TkA01G167160 | LXL04_012403 | 100.0% | sequence_supported_annotation_or_model_conflict | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00046 Chr01:42535681-43801504 Chr03:10859347-11832572 mixed 39 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 39 · 当前范围 1–39 · 页码 1/1

TkA01G166350 → LXL04_012413
96.3%
TkA01G166360 → LXL04_012412
100.0%
TkA01G166380 → LXL04_012411
49.3%
TkA01G166410 → LXL04_012411
67.9%
TkA01G166820 → LXL04_012410
100.0%
TkA01G166840 → LXL04_012409
99.9%
TkA01G166850 → LXL04_012408
100.0%
TkA01G166860 → LXL04_012407
99.5%
TkA01G166880 → LXL04_012407
99.0%
TkA01G167040 → LXL04_012406
100.0%
TkA01G167150 → LXL04_012404
92.8%
TkA01G167160 → LXL04_012403
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G166350LXL04_012413JCVI_TKOH_0004696.3100.0 / 100.0Complex
TkA01G166360LXL04_012412JCVI_TKOH_00046100.0100.0 / 100.0待复核
TkA01G166380LXL04_012411JCVI_TKOH_0004649.387.356 / 72.757Complex
TkA01G166410LXL04_012411JCVI_TKOH_0004667.9100.0 / 69.435Complex
TkA01G166820LXL04_012410JCVI_TKOH_00046100.0100.0 / 100.0待复核
TkA01G166840LXL04_012409JCVI_TKOH_0004699.9100.0 / 100.0Complex
TkA01G166850LXL04_012408JCVI_TKOH_00046100.0100.0 / 100.0待复核
TkA01G166860LXL04_012407JCVI_TKOH_0004699.599.296 / 35.696待复核
TkA01G166880LXL04_012407JCVI_TKOH_0004699.084.783 / 44.43Complex
TkA01G167040LXL04_012406JCVI_TKOH_00046100.0100.0 / 59.965待复核
TkA01G167150LXL04_012404JCVI_TKOH_0004692.877.654 / 87.421Complex
TkA01G167160LXL04_012403JCVI_TKOH_00046100.089.744 / 30.523待复核
TkA01G167170LXL04_012402JCVI_TKOH_00046100.0100.0 / 26.994待复核
TkA01G167480LXL04_012398JCVI_TKOH_0004699.7100.0 / 100.0待复核
TkA01G167550LXL04_012393JCVI_TKOH_00046100.066.667 / 28.715待复核
TkA01G167560LXL04_012392JCVI_TKOH_0004698.3100.0 / 100.0Complex
TkA01G167570LXL04_012391JCVI_TKOH_0004695.8100.0 / 100.0Complex
TkA01G167580LXL04_012390JCVI_TKOH_0004696.7100.0 / 100.0Complex
TkA01G167650LXL04_012389JCVI_TKOH_0004699.4100.0 / 100.0Complex
TkA01G167670LXL04_012388JCVI_TKOH_0004697.593.795 / 87.528Complex
TkA01G167900LXL04_012382JCVI_TKOH_0004690.6100.0 / 96.0Complex
TkA01G167910LXL04_012381JCVI_TKOH_0004699.696.667 / 100.0Complex
TkA01G168100LXL04_012377JCVI_TKOH_0004699.7100.0 / 83.457Complex
TkA01G168480LXL04_012375JCVI_TKOH_00046100.095.213 / 89.055Complex
TkA01G168830LXL04_012372JCVI_TKOH_0004699.5100.0 / 100.0Complex
TkA01G168840LXL04_012371JCVI_TKOH_0004698.894.972 / 100.0Complex
TkA01G168930LXL04_012370JCVI_TKOH_0004693.598.662 / 98.835Complex
TkA01G169190LXL04_012369JCVI_TKOH_0004693.172.05 / 95.726Probable
TkA01G169250LXL04_012368JCVI_TKOH_00046100.0100.0 / 100.0Complex
TkA01G169330LXL04_012367JCVI_TKOH_0004699.4100.0 / 100.0Complex
TkA01G169380LXL04_012366JCVI_TKOH_0004698.8100.0 / 100.0Complex
TkA01G169410LXL04_012365JCVI_TKOH_0004698.0100.0 / 100.0Complex
TkA01G169420LXL04_012363JCVI_TKOH_00046100.0100.0 / 100.0Complex
TkA01G169980LXL04_012362JCVI_TKOH_00046100.0100.0 / 100.0待复核
TkA01G170090LXL04_012359JCVI_TKOH_0004696.8100.0 / 100.0Complex
TkA01G170780LXL04_012356JCVI_TKOH_0004698.199.458 / 100.0Complex
TkA01G170800LXL04_012355JCVI_TKOH_00046100.0100.0 / 100.0待复核
TkA01G170880LXL04_012353JCVI_TKOH_0004699.7100.0 / 100.0Complex
TkA01G170900LXL04_012352JCVI_TKOH_0004693.5100.0 / 100.0待复核