同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00023
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 64
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00023

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00023 Chr01 93793679-97480235 Chr01 69525150-73084232 mixed High 64 anchors
Chr01 93793679-97480235 Chr01 69525150-73084232 JCVI_TKOH_00023 · 64 gene pairs TkA01G375980 | LXL04_003268 | 58.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G375990 | LXL04_003271 | 58.3% | non_reciprocal_best_hit | Complex TkA01G376960 | LXL04_003275 | 96.9% | RBH_high_identity_coverage_synteny | Strict TkA01G377350 | LXL04_003276 | 97.7% | sequence_supported_annotation_or_model_conflict | Review TkA01G377630 | LXL04_003278 | 99.2% | sequence_supported_annotation_or_model_conflict | Review TkA01G380230 | LXL04_003265 | 97.6% | RBH_high_identity_coverage_synteny | Strict TkA01G380370 | LXL04_003263 | 98.7% | RBH_high_identity_coverage_synteny | Strict TkA01G380380 | LXL04_003262 | 99.7% | RBH_high_identity_coverage_synteny | Strict TkA01G380630 | LXL04_003258 | 76.3% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G380640 | LXL04_003257 | 82.1% | multi_source_to_OH1004 | Complex TkA01G381010 | LXL04_003255 | 85.7% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G381230 | LXL04_003257 | 92.7% | multi_source_to_OH1004 | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00023 Chr01:93793679-97480235 Chr01:69525150-73084232 mixed 64 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 64 · 当前范围 1–64 · 页码 1/1

TkA01G375980 → LXL04_003268
58.5%
TkA01G375990 → LXL04_003271
58.3%
TkA01G376960 → LXL04_003275
96.9%
TkA01G377350 → LXL04_003276
97.7%
TkA01G377630 → LXL04_003278
99.2%
TkA01G380230 → LXL04_003265
97.6%
TkA01G380370 → LXL04_003263
98.7%
TkA01G380380 → LXL04_003262
99.7%
TkA01G380630 → LXL04_003258
76.3%
TkA01G380640 → LXL04_003257
82.1%
TkA01G381010 → LXL04_003255
85.7%
TkA01G381230 → LXL04_003257
92.7%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G375980LXL04_003268JCVI_TKOH_0002358.548.507 / 35.366待复核
TkA01G375990LXL04_003271JCVI_TKOH_0002358.382.734 / 63.291Complex
TkA01G376960LXL04_003275JCVI_TKOH_0002396.9100.0 / 100.0Strict
TkA01G377350LXL04_003276JCVI_TKOH_0002397.795.62 / 36.695待复核
TkA01G377630LXL04_003278JCVI_TKOH_0002399.288.809 / 17.324待复核
TkA01G380230LXL04_003265JCVI_TKOH_0002397.6100.0 / 100.0Strict
TkA01G380370LXL04_003263JCVI_TKOH_0002398.7100.0 / 100.0Strict
TkA01G380380LXL04_003262JCVI_TKOH_0002399.7100.0 / 100.0Strict
TkA01G380630LXL04_003258JCVI_TKOH_0002376.397.849 / 100.0待复核
TkA01G380640LXL04_003257JCVI_TKOH_0002382.199.032 / 50.427Complex
TkA01G381010LXL04_003255JCVI_TKOH_0002385.795.059 / 97.356待复核
TkA01G381230LXL04_003257JCVI_TKOH_0002392.798.317 / 67.863Complex
TkA01G381360LXL04_003257JCVI_TKOH_0002372.899.15 / 68.376Complex
TkA01G381610LXL04_003251JCVI_TKOH_0002398.2100.0 / 89.836Strict
TkA01G381620LXL04_003250JCVI_TKOH_00023100.0100.0 / 100.0Strict
TkA01G382440LXL04_003249JCVI_TKOH_00023100.0100.0 / 100.0待复核
TkA01G382740LXL04_003246JCVI_TKOH_0002396.4100.0 / 100.0Strict
TkA01G382750LXL04_003245JCVI_TKOH_0002398.6100.0 / 100.0Strict
TkA01G382760LXL04_003244JCVI_TKOH_0002398.6100.0 / 99.542Strict
TkA01G382790LXL04_003243JCVI_TKOH_0002399.3100.0 / 100.0Strict
TkA01G382810LXL04_003242JCVI_TKOH_0002399.7100.0 / 100.0Strict
TkA01G382990LXL04_003241JCVI_TKOH_0002375.1100.0 / 93.596Complex
TkA01G383110LXL04_003237JCVI_TKOH_0002388.7100.0 / 73.208待复核
TkA01G383490LXL04_003236JCVI_TKOH_0002399.499.359 / 42.35待复核
TkA01G383530LXL04_003235JCVI_TKOH_0002397.5100.0 / 100.0Strict
TkA01G383560LXL04_003233JCVI_TKOH_0002378.797.6 / 29.327Complex
TkA01G383590LXL04_003234JCVI_TKOH_0002368.099.427 / 91.41Complex
TkA01G383670LXL04_003234JCVI_TKOH_00023100.0100.0 / 91.63Complex
TkA01G383690LXL04_003233JCVI_TKOH_0002399.8100.0 / 100.0Complex
TkA01G383760LXL04_003232JCVI_TKOH_00023100.099.133 / 75.885Probable
TkA01G383790LXL04_003230JCVI_TKOH_0002355.496.721 / 100.0Complex
TkA01G383900LXL04_003230JCVI_TKOH_0002387.5100.0 / 100.0Complex
TkA01G383920LXL04_003228JCVI_TKOH_0002371.997.544 / 73.298Complex
TkA01G384430LXL04_003226JCVI_TKOH_0002374.799.631 / 25.685Complex
TkA01G384750LXL04_003213JCVI_TKOH_0002380.794.715 / 25.769Complex
TkA01G384790LXL04_003216JCVI_TKOH_0002394.680.315 / 12.085Complex
TkA01G384940LXL04_003223JCVI_TKOH_0002392.098.681 / 67.754Complex
TkA01G384950LXL04_003215JCVI_TKOH_0002391.474.074 / 24.911Complex
TkA01G385570LXL04_003215JCVI_TKOH_0002370.485.714 / 48.754待复核
TkA01G385600LXL04_003214JCVI_TKOH_0002387.9100.0 / 100.0待复核
TkA01G385610LXL04_003208JCVI_TKOH_0002398.5100.0 / 100.0Strict
TkA01G385620LXL04_003210JCVI_TKOH_0002390.099.762 / 49.646待复核
TkA01G385630LXL04_003207JCVI_TKOH_0002381.8100.0 / 88.0待复核
TkA01G385800LXL04_003205JCVI_TKOH_00023100.0100.0 / 100.0Strict
TkA01G385820LXL04_003204JCVI_TKOH_00023100.0100.0 / 100.0Strict
TkA01G385830LXL04_003203JCVI_TKOH_0002398.595.814 / 100.0Strict
TkA01G385890LXL04_003202JCVI_TKOH_0002391.0100.0 / 100.0Probable
TkA01G385900LXL04_003200JCVI_TKOH_0002362.989.676 / 99.687Complex
TkA01G385970LXL04_003200JCVI_TKOH_0002394.7100.0 / 100.0Complex
TkA01G386430LXL04_003195JCVI_TKOH_0002398.589.933 / 100.0Strict
TkA01G386500LXL04_003194JCVI_TKOH_0002398.0100.0 / 84.521Strict
TkA01G386940LXL04_003190JCVI_TKOH_00023100.0100.0 / 100.0Strict
TkA01G387040LXL04_003188JCVI_TKOH_00023100.0100.0 / 54.148待复核
TkA01G387240LXL04_003183JCVI_TKOH_0002399.7100.0 / 100.0Strict
TkA01G387250LXL04_003182JCVI_TKOH_0002395.529.73 / 17.121Complex
TkA01G387270LXL04_003181JCVI_TKOH_0002383.095.431 / 70.588待复核
TkA01G387470LXL04_003175JCVI_TKOH_00023100.0100.0 / 100.0Strict
TkA01G388260LXL04_003172JCVI_TKOH_00023100.079.464 / 48.108Complex
TkA01G388350LXL04_003168JCVI_TKOH_0002396.5100.0 / 52.083待复核
TkA01G388910LXL04_003165JCVI_TKOH_0002374.8100.0 / 100.0Complex
TkA01G389250LXL04_003165JCVI_TKOH_0002398.1100.0 / 63.462Complex
TkA01G389290LXL04_003164JCVI_TKOH_00023100.0100.0 / 70.199Complex
TkA01G389330LXL04_003161JCVI_TKOH_00023100.0100.0 / 100.0Strict
TkA01G390490LXL04_003158JCVI_TKOH_0002399.8100.0 / 100.0Strict