ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 8 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA01G013270
Chr01:3427218-3429575 (+)
GWHBCHF00000002
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
94.400 Q 96.174 / T 24.926 |
JCVI_TKOH_00002 | TkA01G013270 |
|
TkA01G013350
Chr01:3448467-3450924 (+)
GWHBCHF00000002
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
100.000 Q 91.313 / T 15.616 |
JCVI_TKOH_00002 | TkA01G013350 |
|
TkA01G131610
Chr01:33274619-33276828 (-)
GWHBCHF00000002
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
40.700 Q 92.098 / T 27.171 |
TkA01G131610 | |
|
TkA01G400250
Chr01:99911433-99914302 (+)
GWHBCHF00000002
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
83.300 Q 98.819 / T 8.287 |
TkA01G400250 | |
|
TkA03G081790
Chr03:20903098-20904142 (-)
GWHBCHF00000004
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
73.600 Q 85.849 / T 3.004 |
TkA03G081790 | |
|
TkA05G316490
Chr05:78110803-78117373 (+)
GWHBCHF00000006
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
61.300 Q 88.828 / T 33.476 |
TkA05G316490 | |
|
TkA05G428170
Chr05:106761520-106767710 (-)
GWHBCHF00000006
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
78.600 Q 44.746 / T 8.452 |
TkA05G428170 | |
|
TkA06G136570
Chr06:35742275-35746696 (-)
GWHBCHF00000007
|
LXL04_005843
Chr01:174410470-174424237 (-)
CM104799.1
|
Many-to-one | non reciprocal best hit Complex |
41.300 Q 91.530 / T 36.085 |
TkA06G136570 |
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