同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00418
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 19
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00418

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00418 ChrUn 16470376-17433580 Chr08 30423612-31349625 + High 19 anchors
ChrUn 16470376-17433580 Chr08 30423612-31349625 JCVI_TKOH_00418 · 19 gene pairs TkAUNG057610 | LXL04_035839 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkAUNG057900 | LXL04_035845 | 98.7% | non_reciprocal_best_hit | Complex TkAUNG057930 | LXL04_035847 | 99.7% | multi_source_to_OH1004 | Complex TkAUNG057970 | LXL04_035848 | 100.0% | multi_source_to_OH1004 | Complex TkAUNG057980 | LXL04_035850 | 99.8% | sequence_supported_annotation_or_model_conflict | Review TkAUNG058050 | LXL04_035866 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkAUNG058460 | LXL04_035870 | 98.8% | multi_source_to_OH1004 | Complex TkAUNG058560 | LXL04_035870 | 97.5% | multi_source_to_OH1004 | Complex TkAUNG058690 | LXL04_035870 | 97.3% | sequence_supported_annotation_or_model_conflict | Review TkAUNG058700 | LXL04_035871 | 100.0% | multi_source_to_OH1004 | Complex TkAUNG058780 | LXL04_035876 | 87.0% | multi_source_to_OH1004 | Complex TkAUNG058790 | LXL04_035877 | 91.1% | multi_source_to_OH1004 | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00418 ChrUn:16470376-17433580 Chr08:30423612-31349625 + 19 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 19 · 当前范围 1–19 · 页码 1/1

TkAUNG057610 → LXL04_035839
100.0%
TkAUNG057900 → LXL04_035845
98.7%
TkAUNG057930 → LXL04_035847
99.7%
TkAUNG057970 → LXL04_035848
100.0%
TkAUNG057980 → LXL04_035850
99.8%
TkAUNG058050 → LXL04_035866
100.0%
TkAUNG058460 → LXL04_035870
98.8%
TkAUNG058560 → LXL04_035870
97.5%
TkAUNG058690 → LXL04_035870
97.3%
TkAUNG058700 → LXL04_035871
100.0%
TkAUNG058780 → LXL04_035876
87.0%
TkAUNG058790 → LXL04_035877
91.1%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkAUNG057610LXL04_035839JCVI_TKOH_00418100.0100.0 / 100.0待复核
TkAUNG057900LXL04_035845JCVI_TKOH_0041898.783.15 / 100.0Complex
TkAUNG057930LXL04_035847JCVI_TKOH_0041899.7100.0 / 66.466Complex
TkAUNG057970LXL04_035848JCVI_TKOH_00418100.0100.0 / 100.0Complex
TkAUNG057980LXL04_035850JCVI_TKOH_0041899.8100.0 / 100.0待复核
TkAUNG058050LXL04_035866JCVI_TKOH_00418100.090.083 / 32.831待复核
TkAUNG058460LXL04_035870JCVI_TKOH_0041898.8100.0 / 62.403Complex
TkAUNG058560LXL04_035870JCVI_TKOH_0041897.5100.0 / 62.403Complex
TkAUNG058690LXL04_035870JCVI_TKOH_0041897.3100.0 / 100.0待复核
TkAUNG058700LXL04_035871JCVI_TKOH_00418100.0100.0 / 100.0Complex
TkAUNG058780LXL04_035876JCVI_TKOH_0041887.085.106 / 82.051Complex
TkAUNG058790LXL04_035877JCVI_TKOH_0041891.194.651 / 91.247Complex
TkAUNG058810LXL04_035878JCVI_TKOH_0041888.998.71 / 30.237Complex
TkAUNG059330LXL04_035880JCVI_TKOH_00418100.099.381 / 92.775Complex
TkAUNG059710LXL04_035882JCVI_TKOH_0041885.0100.0 / 100.0Complex
TkAUNG059720LXL04_035883JCVI_TKOH_00418100.0100.0 / 100.0待复核
TkAUNG059730LXL04_035884JCVI_TKOH_00418100.096.947 / 76.97Complex
TkAUNG059740LXL04_035885JCVI_TKOH_00418100.091.667 / 100.0Complex
TkAUNG059790LXL04_035886JCVI_TKOH_00418100.0100.0 / 89.706Complex