Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00368
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 8
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00368The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00368 |
ChrUn:1123224-1296033 | Chr01:173793472-174211536 | mixed | 8 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 8 · Showing 1–8 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkAUNG003690 | LXL04_005818 | JCVI_TKOH_00368 | 100.0 | 100.0 / 100.0 | Strict |
TkAUNG003990 | LXL04_005817 | JCVI_TKOH_00368 | 100.0 | 100.0 / 100.0 | Strict |
TkAUNG004210 | LXL04_005814 | JCVI_TKOH_00368 | 98.3 | 100.0 / 100.0 | Strict |
TkAUNG004220 | LXL04_005813 | JCVI_TKOH_00368 | 99.6 | 100.0 / 100.0 | Complex |
TkAUNG004240 | LXL04_005812 | JCVI_TKOH_00368 | 100.0 | 100.0 / 45.106 | Review |
TkAUNG004250 | LXL04_005811 | JCVI_TKOH_00368 | 100.0 | 100.0 / 100.0 | Strict |
TkAUNG004260 | LXL04_005810 | JCVI_TKOH_00368 | 87.5 | 100.0 / 100.0 | Review |
TkAUNG004290 | LXL04_005808 | JCVI_TKOH_00368 | 92.3 | 100.0 / 100.0 | Probable |