Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00268
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 25
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00268The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00268 |
Chr06:11697587-12165767 | Chr05:115576569-116050957 | + | 25 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 25 · Showing 1–25 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G043270 | LXL04_025704 | JCVI_TKOH_00268 | 67.2 | 100.0 / 100.0 | Review |
TkA06G043520 | LXL04_025706 | JCVI_TKOH_00268 | 92.4 | 100.0 / 90.801 | Complex |
TkA06G043580 | LXL04_025707 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G043640 | LXL04_025708 | JCVI_TKOH_00268 | 99.9 | 100.0 / 100.0 | Strict |
TkA06G043650 | LXL04_025709 | JCVI_TKOH_00268 | 100.0 | 99.048 / 92.035 | Complex |
TkA06G043680 | LXL04_025710 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G043720 | LXL04_025712 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G043730 | LXL04_025713 | JCVI_TKOH_00268 | 99.8 | 100.0 / 100.0 | Complex |
TkA06G043860 | LXL04_025714 | JCVI_TKOH_00268 | 99.0 | 100.0 / 100.0 | Complex |
TkA06G043900 | LXL04_025715 | JCVI_TKOH_00268 | 98.7 | 100.0 / 100.0 | Complex |
TkA06G044280 | LXL04_025717 | JCVI_TKOH_00268 | 91.4 | 100.0 / 95.044 | Complex |
TkA06G044290 | LXL04_025718 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Review |
TkA06G044420 | LXL04_025719 | JCVI_TKOH_00268 | 86.5 | 100.0 / 100.0 | Complex |
TkA06G044450 | LXL04_025720 | JCVI_TKOH_00268 | 98.0 | 100.0 / 100.0 | Strict |
TkA06G044470 | LXL04_025721 | JCVI_TKOH_00268 | 68.5 | 100.0 / 74.933 | Complex |
TkA06G044480 | LXL04_025722 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G044550 | LXL04_025723 | JCVI_TKOH_00268 | 78.0 | 99.543 / 48.873 | Review |
TkA06G044560 | LXL04_025725 | JCVI_TKOH_00268 | 98.7 | 100.0 / 100.0 | Strict |
TkA06G044590 | LXL04_025726 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G044600 | LXL04_025727 | JCVI_TKOH_00268 | 91.5 | 96.486 / 77.666 | Complex |
TkA06G044650 | LXL04_025728 | JCVI_TKOH_00268 | 89.3 | 100.0 / 100.0 | Complex |
TkA06G044660 | LXL04_025729 | JCVI_TKOH_00268 | 100.0 | 65.385 / 31.925 | Review |
TkA06G044700 | LXL04_025730 | JCVI_TKOH_00268 | 100.0 | 100.0 / 87.135 | Complex |
TkA06G044820 | LXL04_025733 | JCVI_TKOH_00268 | 99.6 | 86.513 / 71.467 | Complex |
TkA06G044850 | LXL04_025735 | JCVI_TKOH_00268 | 100.0 | 100.0 / 100.0 | Complex |