同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00144
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 64
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00144

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00144 Chr03 94466883-96853545 Chr02 94694419-96866436 mixed High 64 anchors
Chr03 94466883-96853545 Chr02 94694419-96866436 JCVI_TKOH_00144 · 64 gene pairs TkA03G382660 | LXL04_008332 | 99.5% | multi_source_to_OH1004 | Complex TkA03G382710 | LXL04_008327 | 97.5% | multi_source_to_OH1004 | Complex TkA03G382800 | LXL04_008326 | 95.9% | multi_source_to_OH1004 | Complex TkA03G382830 | LXL04_008325 | 99.7% | multi_source_to_OH1004 | Complex TkA03G382870 | LXL04_008324 | 100.0% | non_reciprocal_best_hit | Complex TkA03G383070 | LXL04_008322 | 97.8% | multi_source_to_OH1004 | Complex TkA03G383110 | LXL04_008321 | 98.5% | multi_source_to_OH1004 | Complex TkA03G383120 | LXL04_008320 | 97.9% | sequence_supported_annotation_or_model_conflict | Review TkA03G383130 | LXL04_008319 | 99.6% | sequence_supported_annotation_or_model_conflict | Review TkA03G383620 | LXL04_008332 | 99.7% | multi_source_to_OH1004 | Complex TkA03G383770 | LXL04_008330 | 92.9% | multi_source_to_OH1004 | Complex TkA03G384130 | LXL04_008318 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00144 Chr03:94466883-96853545 Chr02:94694419-96866436 mixed 64 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 64 · 当前范围 1–64 · 页码 1/1

TkA03G382660 → LXL04_008332
99.5%
TkA03G382710 → LXL04_008327
97.5%
TkA03G382800 → LXL04_008326
95.9%
TkA03G382830 → LXL04_008325
99.7%
TkA03G382870 → LXL04_008324
100.0%
TkA03G383070 → LXL04_008322
97.8%
TkA03G383110 → LXL04_008321
98.5%
TkA03G383120 → LXL04_008320
97.9%
TkA03G383130 → LXL04_008319
99.6%
TkA03G383620 → LXL04_008332
99.7%
TkA03G383770 → LXL04_008330
92.9%
TkA03G384130 → LXL04_008318
100.0%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA03G382660LXL04_008332JCVI_TKOH_0014499.5100.0 / 100.0Complex
TkA03G382710LXL04_008327JCVI_TKOH_0014497.5100.0 / 100.0Complex
TkA03G382800LXL04_008326JCVI_TKOH_0014495.9100.0 / 100.0Complex
TkA03G382830LXL04_008325JCVI_TKOH_0014499.7100.0 / 100.0Complex
TkA03G382870LXL04_008324JCVI_TKOH_00144100.0100.0 / 96.552Complex
TkA03G383070LXL04_008322JCVI_TKOH_0014497.8100.0 / 100.0Complex
TkA03G383110LXL04_008321JCVI_TKOH_0014498.596.296 / 67.01Complex
TkA03G383120LXL04_008320JCVI_TKOH_0014497.9100.0 / 100.0待复核
TkA03G383130LXL04_008319JCVI_TKOH_0014499.696.8 / 45.489待复核
TkA03G383620LXL04_008332JCVI_TKOH_0014499.7100.0 / 100.0Complex
TkA03G383770LXL04_008330JCVI_TKOH_0014492.991.593 / 87.137Complex
TkA03G384130LXL04_008318JCVI_TKOH_00144100.062.838 / 36.905待复核
TkA03G384240LXL04_008317JCVI_TKOH_0014491.597.475 / 87.917Complex
TkA03G384260LXL04_008316JCVI_TKOH_0014499.699.625 / 100.0Complex
TkA03G384370LXL04_008314JCVI_TKOH_00144100.088.43 / 98.165待复核
TkA03G384980LXL04_008327JCVI_TKOH_0014499.594.507 / 98.154Complex
TkA03G385270LXL04_008326JCVI_TKOH_0014495.7100.0 / 100.0Complex
TkA03G385300LXL04_008325JCVI_TKOH_0014499.4100.0 / 100.0Complex
TkA03G385340LXL04_008324JCVI_TKOH_00144100.0100.0 / 100.0待复核
TkA03G385520LXL04_008322JCVI_TKOH_0014496.2100.0 / 100.0Complex
TkA03G385670LXL04_008321JCVI_TKOH_0014496.996.296 / 67.01Complex
TkA03G385690LXL04_008320JCVI_TKOH_0014498.6100.0 / 100.0待复核
TkA03G385700LXL04_008319JCVI_TKOH_0014499.499.254 / 100.0Complex
TkA03G385860LXL04_008317JCVI_TKOH_0014491.097.475 / 87.917Complex
TkA03G385960LXL04_008316JCVI_TKOH_0014499.8100.0 / 97.17Complex
TkA03G385970LXL04_008315JCVI_TKOH_0014495.2100.0 / 97.491待复核
TkA03G386030LXL04_008314JCVI_TKOH_00144100.088.43 / 98.165待复核
TkA03G386300LXL04_008313JCVI_TKOH_00144100.0100.0 / 85.358Complex
TkA03G386330LXL04_008313JCVI_TKOH_0014476.8100.0 / 67.601Complex
TkA03G386350LXL04_008310JCVI_TKOH_00144100.0100.0 / 80.139Complex
TkA03G386370LXL04_008309JCVI_TKOH_00144100.0100.0 / 100.0Complex
TkA03G386380LXL04_008308JCVI_TKOH_0014498.1100.0 / 100.0Complex
TkA03G386550LXL04_008306JCVI_TKOH_00144100.096.617 / 69.771Complex
TkA03G386760LXL04_008309JCVI_TKOH_00144100.0100.0 / 100.0Complex
TkA03G386770LXL04_008308JCVI_TKOH_0014499.4100.0 / 100.0Complex
TkA03G386900LXL04_008306JCVI_TKOH_0014499.7100.0 / 100.0Complex
TkA03G387360LXL04_008302JCVI_TKOH_0014491.0100.0 / 100.0Probable
TkA03G387420LXL04_008301JCVI_TKOH_0014497.8100.0 / 100.0Strict
TkA03G387630LXL04_008300JCVI_TKOH_0014498.2100.0 / 100.0待复核
TkA03G387730LXL04_008299JCVI_TKOH_00144100.093.455 / 52.772待复核
TkA03G387760LXL04_008298JCVI_TKOH_0014499.5100.0 / 93.476Complex
TkA03G387860LXL04_008294JCVI_TKOH_0014498.2100.0 / 100.0待复核
TkA03G388080LXL04_008279JCVI_TKOH_0014494.3100.0 / 100.0Probable
TkA03G388290LXL04_008278JCVI_TKOH_0014499.8100.0 / 100.0Strict
TkA03G388700LXL04_008276JCVI_TKOH_0014499.7100.0 / 100.0Strict
TkA03G388710LXL04_008275JCVI_TKOH_00144100.0100.0 / 100.0Complex
TkA03G388850LXL04_008274JCVI_TKOH_0014499.780.332 / 64.695待复核
TkA03G388980LXL04_008272JCVI_TKOH_0014499.7100.0 / 100.0Strict
TkA03G389050LXL04_008270JCVI_TKOH_0014498.5100.0 / 100.0待复核
TkA03G389540LXL04_008266JCVI_TKOH_0014497.999.31 / 40.223待复核
TkA03G389620LXL04_008262JCVI_TKOH_0014499.8100.0 / 100.0Strict
TkA03G389940LXL04_008258JCVI_TKOH_0014499.799.383 / 72.851Complex
TkA03G389950LXL04_008257JCVI_TKOH_00144100.093.593 / 88.528Complex
TkA03G389990LXL04_008256JCVI_TKOH_00144100.0100.0 / 99.804Strict
TkA03G390020LXL04_008255JCVI_TKOH_0014497.799.013 / 78.182Probable
TkA03G390040LXL04_008254JCVI_TKOH_0014498.891.005 / 99.422Complex
TkA03G390060LXL04_008252JCVI_TKOH_0014490.8100.0 / 100.0Complex
TkA03G390100LXL04_008249JCVI_TKOH_0014499.8100.0 / 100.0Complex
TkA03G390420LXL04_008248JCVI_TKOH_0014494.3100.0 / 75.231Probable
TkA03G390520LXL04_008247JCVI_TKOH_0014498.099.946 / 69.434待复核
TkA03G390580LXL04_008246JCVI_TKOH_0014498.279.943 / 20.805待复核
TkA03G390590LXL04_008245JCVI_TKOH_00144100.0100.0 / 98.148Complex
TkA03G390600LXL04_008244JCVI_TKOH_0014475.973.184 / 100.0待复核
TkA03G390690LXL04_008243JCVI_TKOH_0014498.6100.0 / 100.0Strict