Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00012

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 149

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00012

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00012 Chr01 43889281-56253957 Chr01 120091227-132450164 mixed High 149 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00012`	Chr01:43889281-56253957	Chr01:120091227-132450164	mixed	149	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 149 · Showing 1–149 · Page 1/1

Download All Anchors TSV

TkA01G171470 → LXL04_004317

84.6%

TkA01G171710 → LXL04_004318

93.5%

TkA01G172150 → LXL04_004320

99.5%

TkA01G172330 → LXL04_004319

100.0%

TkA01G172480 → LXL04_004318

93.5%

TkA01G172610 → LXL04_004317

84.6%

TkA01G173870 → LXL04_004312

98.2%

TkA01G174100 → LXL04_004310

99.1%

TkA01G174110 → LXL04_004309

82.0%

TkA01G174140 → LXL04_004306

100.0%

TkA01G174360 → LXL04_004297

100.0%

TkA01G174380 → LXL04_004296

96.2%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA01G171470`	`LXL04_004317`	`JCVI_TKOH_00012`	84.6	100.0 / 100.0	Complex
`TkA01G171710`	`LXL04_004318`	`JCVI_TKOH_00012`	93.5	97.175 / 88.038	Complex
`TkA01G172150`	`LXL04_004320`	`JCVI_TKOH_00012`	99.5	77.903 / 53.061	Review
`TkA01G172330`	`LXL04_004319`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Strict
`TkA01G172480`	`LXL04_004318`	`JCVI_TKOH_00012`	93.5	97.175 / 88.038	Complex
`TkA01G172610`	`LXL04_004317`	`JCVI_TKOH_00012`	84.6	100.0 / 100.0	Complex
`TkA01G173870`	`LXL04_004312`	`JCVI_TKOH_00012`	98.2	100.0 / 100.0	Review
`TkA01G174100`	`LXL04_004310`	`JCVI_TKOH_00012`	99.1	100.0 / 100.0	Strict
`TkA01G174110`	`LXL04_004309`	`JCVI_TKOH_00012`	82.0	89.72 / 49.02	Complex
`TkA01G174140`	`LXL04_004306`	`JCVI_TKOH_00012`	100.0	96.552 / 96.552	Strict
`TkA01G174360`	`LXL04_004297`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Strict
`TkA01G174380`	`LXL04_004296`	`JCVI_TKOH_00012`	96.2	100.0 / 100.0	Strict
`TkA01G174510`	`LXL04_004294`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Review
`TkA01G174520`	`LXL04_004293`	`JCVI_TKOH_00012`	99.7	100.0 / 100.0	Strict
`TkA01G174530`	`LXL04_004292`	`JCVI_TKOH_00012`	92.0	98.744 / 90.385	Probable
`TkA01G174660`	`LXL04_004291`	`JCVI_TKOH_00012`	93.6	100.0 / 100.0	Probable
`TkA01G174740`	`LXL04_004287`	`JCVI_TKOH_00012`	84.1	94.089 / 46.217	Complex
`TkA01G174750`	`LXL04_004287`	`JCVI_TKOH_00012`	99.5	100.0 / 39.468	Review
`TkA01G174760`	`LXL04_004286`	`JCVI_TKOH_00012`	92.9	100.0 / 100.0	Probable
`TkA01G174830`	`LXL04_004285`	`JCVI_TKOH_00012`	100.0	100.0 / 66.258	Review
`TkA01G174860`	`LXL04_004283`	`JCVI_TKOH_00012`	78.9	98.986 / 34.124	Review
`TkA01G174910`	`LXL04_004282`	`JCVI_TKOH_00012`	98.9	100.0 / 95.756	Strict
`TkA01G174920`	`LXL04_004281`	`JCVI_TKOH_00012`	89.5	99.869 / 99.866	Review
`TkA01G175060`	`LXL04_004280`	`JCVI_TKOH_00012`	98.2	100.0 / 100.0	Strict
`TkA01G175120`	`LXL04_004278`	`JCVI_TKOH_00012`	93.1	100.0 / 100.0	Complex
`TkA01G175130`	`LXL04_004277`	`JCVI_TKOH_00012`	99.4	100.0 / 100.0	Strict
`TkA01G175340`	`LXL04_004275`	`JCVI_TKOH_00012`	98.1	89.971 / 81.771	Strict
`TkA01G175540`	`LXL04_004274`	`JCVI_TKOH_00012`	100.0	100.0 / 62.032	Complex
`TkA01G175610`	`LXL04_004273`	`JCVI_TKOH_00012`	76.3	98.765 / 66.404	Complex
`TkA01G175690`	`LXL04_004270`	`JCVI_TKOH_00012`	91.3	97.122 / 97.185	Probable
`TkA01G176170`	`LXL04_004268`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Strict
`TkA01G176290`	`LXL04_004263`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Complex
`TkA01G176380`	`LXL04_004261`	`JCVI_TKOH_00012`	95.9	100.0 / 82.7	Complex
`TkA01G176690`	`LXL04_004259`	`JCVI_TKOH_00012`	97.7	100.0 / 100.0	Complex
`TkA01G177280`	`LXL04_004258`	`JCVI_TKOH_00012`	99.5	100.0 / 100.0	Strict
`TkA01G177290`	`LXL04_004257`	`JCVI_TKOH_00012`	99.5	100.0 / 71.675	Probable
`TkA01G177300`	`LXL04_004256`	`JCVI_TKOH_00012`	99.7	100.0 / 100.0	Strict
`TkA01G177750`	`LXL04_004253`	`JCVI_TKOH_00012`	97.5	100.0 / 100.0	Strict
`TkA01G177760`	`LXL04_004250`	`JCVI_TKOH_00012`	98.0	100.0 / 100.0	Strict
`TkA01G177970`	`LXL04_004226`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Strict
`TkA01G178110`	`LXL04_004227`	`JCVI_TKOH_00012`	96.8	88.385 / 58.14	Review
`TkA01G178120`	`LXL04_004228`	`JCVI_TKOH_00012`	94.7	100.0 / 100.0	Probable
`TkA01G179420`	`LXL04_004233`	`JCVI_TKOH_00012`	99.3	100.0 / 100.0	Review
`TkA01G179590`	`LXL04_004234`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Strict
`TkA01G179640`	`LXL04_004235`	`JCVI_TKOH_00012`	99.3	100.0 / 100.0	Strict
`TkA01G180070`	`LXL04_004239`	`JCVI_TKOH_00012`	100.0	45.528 / 55.446	Review
`TkA01G180090`	`LXL04_004241`	`JCVI_TKOH_00012`	97.3	100.0 / 100.0	Strict
`TkA01G180370`	`LXL04_004242`	`JCVI_TKOH_00012`	99.0	100.0 / 100.0	Strict
`TkA01G180390`	`LXL04_004244`	`JCVI_TKOH_00012`	99.7	97.576 / 100.0	Review
`TkA01G180940`	`LXL04_004246`	`JCVI_TKOH_00012`	99.3	100.0 / 100.0	Strict
`TkA01G181710`	`LXL04_004225`	`JCVI_TKOH_00012`	71.2	75.848 / 59.091	Complex
`TkA01G181970`	`LXL04_004225`	`JCVI_TKOH_00012`	61.1	92.358 / 94.781	Complex
`TkA01G182200`	`LXL04_004225`	`JCVI_TKOH_00012`	96.6	100.0 / 100.0	Complex
`TkA01G182210`	`LXL04_004224`	`JCVI_TKOH_00012`	99.5	100.0 / 100.0	Review
`TkA01G182480`	`LXL04_004220`	`JCVI_TKOH_00012`	100.0	96.279 / 99.519	Review
`TkA01G182700`	`LXL04_004219`	`JCVI_TKOH_00012`	97.6	100.0 / 100.0	Strict
`TkA01G182920`	`LXL04_004218`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Complex
`TkA01G182930`	`LXL04_004217`	`JCVI_TKOH_00012`	97.6	95.859 / 92.415	Strict
`TkA01G183050`	`LXL04_004216`	`JCVI_TKOH_00012`	97.6	100.0 / 100.0	Strict
`TkA01G183060`	`LXL04_004215`	`JCVI_TKOH_00012`	82.5	100.0 / 68.831	Complex
`TkA01G183070`	`LXL04_004214`	`JCVI_TKOH_00012`	89.2	100.0 / 100.0	Review
`TkA01G183120`	`LXL04_004211`	`JCVI_TKOH_00012`	90.0	100.0 / 100.0	Probable
`TkA01G183890`	`LXL04_004207`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Complex
`TkA01G184730`	`LXL04_004206`	`JCVI_TKOH_00012`	100.0	94.771 / 89.783	Strict
`TkA01G185080`	`LXL04_004203`	`JCVI_TKOH_00012`	98.0	100.0 / 100.0	Strict
`TkA01G185090`	`LXL04_004202`	`JCVI_TKOH_00012`	95.8	100.0 / 60.759	Review
`TkA01G185460`	`LXL04_004200`	`JCVI_TKOH_00012`	98.0	97.003 / 100.0	Strict
`TkA01G185860`	`LXL04_004198`	`JCVI_TKOH_00012`	92.7	100.0 / 100.0	Complex
`TkA01G185890`	`LXL04_004197`	`JCVI_TKOH_00012`	99.0	100.0 / 100.0	Complex
`TkA01G186160`	`LXL04_004197`	`JCVI_TKOH_00012`	90.7	100.0 / 100.0	Complex
`TkA01G186200`	`LXL04_004195`	`JCVI_TKOH_00012`	96.7	94.062 / 75.75	Complex
`TkA01G186860`	`LXL04_004193`	`JCVI_TKOH_00012`	94.0	100.0 / 97.306	Probable
`TkA01G191810`	`LXL04_004172`	`JCVI_TKOH_00012`	100.0	68.0 / 47.753	Complex
`TkA01G191830`	`LXL04_004171`	`JCVI_TKOH_00012`	89.6	82.775 / 51.183	Review
`TkA01G192120`	`LXL04_004169`	`JCVI_TKOH_00012`	97.0	79.528 / 19.423	Complex
`TkA01G193490`	`LXL04_004154`	`JCVI_TKOH_00012`	71.7	66.082 / 29.737	Complex
`TkA01G193670`	`LXL04_004154`	`JCVI_TKOH_00012`	71.7	66.082 / 29.737	Complex
`TkA01G194800`	`LXL04_004156`	`JCVI_TKOH_00012`	65.3	41.739 / 16.279	Complex
`TkA01G197360`	`LXL04_004145`	`JCVI_TKOH_00012`	100.0	100.0 / 93.978	Complex
`TkA01G197400`	`LXL04_004144`	`JCVI_TKOH_00012`	94.4	100.0 / 100.0	Probable
`TkA01G198280`	`LXL04_004138`	`JCVI_TKOH_00012`	99.8	100.0 / 100.0	Strict
`TkA01G198520`	`LXL04_004136`	`JCVI_TKOH_00012`	76.7	98.917 / 40.6	Review
`TkA01G198680`	`LXL04_004131`	`JCVI_TKOH_00012`	59.2	88.716 / 56.398	Complex
`TkA01G198780`	`LXL04_004133`	`JCVI_TKOH_00012`	99.0	67.742 / 100.0	Complex
`TkA01G198820`	`LXL04_004131`	`JCVI_TKOH_00012`	94.4	99.574 / 55.213	Complex
`TkA01G198960`	`LXL04_004131`	`JCVI_TKOH_00012`	99.1	99.573 / 55.213	Review
`TkA01G199030`	`LXL04_004129`	`JCVI_TKOH_00012`	98.1	100.0 / 67.094	Review
`TkA01G199150`	`LXL04_004128`	`JCVI_TKOH_00012`	95.2	100.0 / 21.045	Review
`TkA01G199160`	`LXL04_004128`	`JCVI_TKOH_00012`	99.1	100.0 / 49.492	Review
`TkA01G199240`	`LXL04_004128`	`JCVI_TKOH_00012`	50.6	99.13 / 46.444	Complex
`TkA01G199260`	`LXL04_004125`	`JCVI_TKOH_00012`	80.1	100.0 / 100.0	Complex
`TkA01G199700`	`LXL04_004118`	`JCVI_TKOH_00012`	100.0	100.0 / 99.02	Strict
`TkA01G200450`	`LXL04_004115`	`JCVI_TKOH_00012`	100.0	94.461 / 51.84	Review
`TkA01G200710`	`LXL04_004113`	`JCVI_TKOH_00012`	99.4	100.0 / 97.721	Complex
`TkA01G200860`	`LXL04_004112`	`JCVI_TKOH_00012`	99.4	100.0 / 100.0	Complex
`TkA01G201080`	`LXL04_004111`	`JCVI_TKOH_00012`	99.1	92.162 / 100.0	Complex
`TkA01G202170`	`LXL04_004106`	`JCVI_TKOH_00012`	99.6	100.0 / 100.0	Strict
`TkA01G202180`	`LXL04_004105`	`JCVI_TKOH_00012`	99.7	100.0 / 100.0	Strict
`TkA01G202190`	`LXL04_004104`	`JCVI_TKOH_00012`	96.9	48.855 / 28.7	Complex
`TkA01G202200`	`LXL04_004103`	`JCVI_TKOH_00012`	96.9	54.237 / 94.118	Review
`TkA01G202310`	`LXL04_004101`	`JCVI_TKOH_00012`	93.2	98.734 / 81.481	Complex
`TkA01G203300`	`LXL04_004100`	`JCVI_TKOH_00012`	99.8	100.0 / 100.0	Strict
`TkA01G203420`	`LXL04_004099`	`JCVI_TKOH_00012`	98.6	100.0 / 100.0	Strict
`TkA01G203580`	`LXL04_004086`	`JCVI_TKOH_00012`	90.9	97.831 / 36.315	Complex
`TkA01G203680`	`LXL04_004093`	`JCVI_TKOH_00012`	94.9	100.0 / 79.73	Complex
`TkA01G203690`	`LXL04_004093`	`JCVI_TKOH_00012`	98.9	100.0 / 94.257	Review
`TkA01G204330`	`LXL04_004091`	`JCVI_TKOH_00012`	98.1	100.0 / 25.401	Review
`TkA01G204610`	`LXL04_004086`	`JCVI_TKOH_00012`	99.6	95.379 / 46.154	Review
`TkA01G204660`	`LXL04_004085`	`JCVI_TKOH_00012`	100.0	99.213 / 70.0	Probable
`TkA01G204820`	`LXL04_004083`	`JCVI_TKOH_00012`	92.3	100.0 / 100.0	Probable
`TkA01G204870`	`LXL04_004081`	`JCVI_TKOH_00012`	85.0	32.716 / 20.656	Review
`TkA01G205250`	`LXL04_004079`	`JCVI_TKOH_00012`	99.6	96.703 / 53.768	Review
`TkA01G206070`	`LXL04_004077`	`JCVI_TKOH_00012`	99.3	100.0 / 27.565	Review
`TkA01G206370`	`LXL04_004071`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Review
`TkA01G206560`	`LXL04_004070`	`JCVI_TKOH_00012`	94.5	100.0 / 100.0	Review
`TkA01G206660`	`LXL04_004068`	`JCVI_TKOH_00012`	98.6	100.0 / 100.0	Strict
`TkA01G207920`	`LXL04_004066`	`JCVI_TKOH_00012`	99.0	99.765 / 48.571	Review
`TkA01G207930`	`LXL04_004065`	`JCVI_TKOH_00012`	98.3	99.793 / 92.857	Strict
`TkA01G207940`	`LXL04_004064`	`JCVI_TKOH_00012`	99.4	100.0 / 100.0	Complex
`TkA01G207970`	`LXL04_004063`	`JCVI_TKOH_00012`	100.0	96.094 / 46.415	Review
`TkA01G208270`	`LXL04_004060`	`JCVI_TKOH_00012`	99.6	100.0 / 91.487	Complex
`TkA01G208590`	`LXL04_004059`	`JCVI_TKOH_00012`	97.7	100.0 / 100.0	Strict
`TkA01G208600`	`LXL04_004058`	`JCVI_TKOH_00012`	97.9	100.0 / 100.0	Review
`TkA01G208970`	`LXL04_004053`	`JCVI_TKOH_00012`	100.0	49.038 / 35.664	Review
`TkA01G209800`	`LXL04_004039`	`JCVI_TKOH_00012`	99.6	100.0 / 100.0	Strict
`TkA01G210250`	`LXL04_004035`	`JCVI_TKOH_00012`	68.5	84.581 / 95.604	Complex
`TkA01G210380`	`LXL04_004029`	`JCVI_TKOH_00012`	100.0	90.476 / 37.402	Review
`TkA01G210830`	`LXL04_004027`	`JCVI_TKOH_00012`	99.7	100.0 / 100.0	Strict
`TkA01G211070`	`LXL04_004025`	`JCVI_TKOH_00012`	97.2	100.0 / 60.227	Complex
`TkA01G211290`	`LXL04_004025`	`JCVI_TKOH_00012`	100.0	100.0 / 60.227	Complex
`TkA01G212110`	`LXL04_004021`	`JCVI_TKOH_00012`	99.6	100.0 / 100.0	Strict
`TkA01G212220`	`LXL04_004020`	`JCVI_TKOH_00012`	98.1	99.349 / 96.643	Strict
`TkA01G212810`	`LXL04_004019`	`JCVI_TKOH_00012`	100.0	100.0 / 100.0	Strict
`TkA01G214450`	`LXL04_004011`	`JCVI_TKOH_00012`	99.4	100.0 / 95.886	Complex
`TkA01G214630`	`LXL04_004010`	`JCVI_TKOH_00012`	98.5	100.0 / 100.0	Complex
`TkA01G215060`	`LXL04_004009`	`JCVI_TKOH_00012`	94.4	98.141 / 88.305	Probable
`TkA01G215230`	`LXL04_004008`	`JCVI_TKOH_00012`	97.0	100.0 / 100.0	Strict
`TkA01G215240`	`LXL04_004007`	`JCVI_TKOH_00012`	99.7	100.0 / 100.0	Complex
`TkA01G215290`	`LXL04_004006`	`JCVI_TKOH_00012`	88.2	99.528 / 81.953	Review
`TkA01G215340`	`LXL04_004005`	`JCVI_TKOH_00012`	93.9	99.756 / 97.608	Probable
`TkA01G215350`	`LXL04_004004`	`JCVI_TKOH_00012`	98.5	99.889 / 95.208	Strict
`TkA01G215410`	`LXL04_004003`	`JCVI_TKOH_00012`	99.1	100.0 / 100.0	Complex
`TkA01G215880`	`LXL04_004001`	`JCVI_TKOH_00012`	99.2	100.0 / 100.0	Complex
`TkA01G215910`	`LXL04_004000`	`JCVI_TKOH_00012`	99.2	92.534 / 100.0	Complex
`TkA01G216010`	`LXL04_003999`	`JCVI_TKOH_00012`	100.0	100.0 / 62.911	Review
`TkA01G216960`	`LXL04_003991`	`JCVI_TKOH_00012`	99.9	100.0 / 100.0	Strict
`TkA01G217700`	`LXL04_003990`	`JCVI_TKOH_00012`	92.9	82.581 / 99.896	Probable
`TkA01G221010`	`LXL04_003982`	`JCVI_TKOH_00012`	99.4	90.556 / 14.791	Review
`TkA01G221030`	`LXL04_003981`	`JCVI_TKOH_00012`	95.2	90.123 / 84.884	Strict