同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00306
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 58
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00306

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00306 Chr07 44870776-56809175 Chr06 50217477-66513175 mixed High 58 anchors
Chr07 44870776-56809175 Chr06 50217477-66513175 JCVI_TKOH_00306 · 58 gene pairs TkA07G175110 | LXL04_028628 | 99.8% | RBH_high_identity_coverage_synteny | Strict TkA07G175550 | LXL04_028631 | 97.6% | multi_candidate_from_TK1151 | Complex TkA07G176520 | LXL04_028633 | 99.5% | RBH_sequence_supported | Probable TkA07G176530 | LXL04_028634 | 98.4% | RBH_high_identity_coverage_synteny | Strict TkA07G176580 | LXL04_028636 | 96.3% | RBH_sequence_supported | Probable TkA07G178140 | LXL04_028639 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G178650 | LXL04_028640 | 99.3% | RBH_high_identity_coverage_synteny | Strict TkA07G178680 | LXL04_028641 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA07G182860 | LXL04_028646 | 87.3% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA07G183090 | LXL04_028647 | 99.3% | sequence_supported_annotation_or_model_conflict | Review TkA07G185410 | LXL04_028648 | 99.9% | RBH_high_identity_coverage_synteny | Strict TkA07G187510 | LXL04_028670 | 99.4% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00306 Chr07:44870776-56809175 Chr06:50217477-66513175 mixed 58 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 58 · 当前范围 1–58 · 页码 1/1

TkA07G175110 → LXL04_028628
99.8%
TkA07G175550 → LXL04_028631
97.6%
TkA07G176520 → LXL04_028633
99.5%
TkA07G176530 → LXL04_028634
98.4%
TkA07G176580 → LXL04_028636
96.3%
TkA07G178140 → LXL04_028639
100.0%
TkA07G178650 → LXL04_028640
99.3%
TkA07G178680 → LXL04_028641
100.0%
TkA07G182860 → LXL04_028646
87.3%
TkA07G183090 → LXL04_028647
99.3%
TkA07G185410 → LXL04_028648
99.9%
TkA07G187510 → LXL04_028670
99.4%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA07G175110LXL04_028628JCVI_TKOH_0030699.8100.0 / 100.0Strict
TkA07G175550LXL04_028631JCVI_TKOH_0030697.6100.0 / 100.0Complex
TkA07G176520LXL04_028633JCVI_TKOH_0030699.597.978 / 74.15Probable
TkA07G176530LXL04_028634JCVI_TKOH_0030698.490.099 / 99.454Strict
TkA07G176580LXL04_028636JCVI_TKOH_0030696.396.41 / 75.6Probable
TkA07G178140LXL04_028639JCVI_TKOH_00306100.0100.0 / 100.0Strict
TkA07G178650LXL04_028640JCVI_TKOH_0030699.3100.0 / 100.0Strict
TkA07G178680LXL04_028641JCVI_TKOH_00306100.097.268 / 90.355Strict
TkA07G182860LXL04_028646JCVI_TKOH_0030687.394.118 / 85.271待复核
TkA07G183090LXL04_028647JCVI_TKOH_0030699.3100.0 / 100.0待复核
TkA07G185410LXL04_028648JCVI_TKOH_0030699.999.717 / 90.102Strict
TkA07G187510LXL04_028670JCVI_TKOH_0030699.479.426 / 60.145待复核
TkA07G187520LXL04_028671JCVI_TKOH_0030666.3100.0 / 35.817待复核
TkA07G189610LXL04_028696JCVI_TKOH_0030678.9100.0 / 100.0待复核
TkA07G189630LXL04_028697JCVI_TKOH_0030699.8100.0 / 92.598Strict
TkA07G190040LXL04_028699JCVI_TKOH_0030699.4100.0 / 100.0Strict
TkA07G193430LXL04_028713JCVI_TKOH_0030698.799.371 / 53.925待复核
TkA07G193560LXL04_028714JCVI_TKOH_0030698.3100.0 / 100.0Strict
TkA07G194130LXL04_028716JCVI_TKOH_00306100.0100.0 / 100.0Strict
TkA07G194810LXL04_028722JCVI_TKOH_00306100.0100.0 / 100.0Complex
TkA07G198400LXL04_028726JCVI_TKOH_00306100.0100.0 / 100.0Strict
TkA07G198570LXL04_028727JCVI_TKOH_0030699.2100.0 / 45.385待复核
TkA07G198580LXL04_028727JCVI_TKOH_00306100.062.857 / 33.846Complex
TkA07G198820LXL04_028730JCVI_TKOH_00306100.0100.0 / 100.0Strict
TkA07G198950LXL04_028732JCVI_TKOH_0030678.8100.0 / 100.0待复核
TkA07G199080LXL04_028733JCVI_TKOH_00306100.099.745 / 98.737Complex
TkA07G199270LXL04_028734JCVI_TKOH_0030633.399.344 / 92.276Complex
TkA07G199840LXL04_028735JCVI_TKOH_0030678.493.6 / 56.627Complex
TkA07G200870LXL04_028739JCVI_TKOH_0030685.2100.0 / 64.706Complex
TkA07G202030LXL04_028741JCVI_TKOH_0030699.0100.0 / 100.0Strict
TkA07G202700LXL04_028743JCVI_TKOH_00306100.0100.0 / 100.0Strict
TkA07G203920LXL04_028751JCVI_TKOH_00306100.0100.0 / 100.0Complex
TkA07G203940LXL04_028752JCVI_TKOH_00306100.087.556 / 56.286待复核
TkA07G206720LXL04_028768JCVI_TKOH_0030692.098.214 / 45.785待复核
TkA07G207660LXL04_028754JCVI_TKOH_0030655.198.551 / 27.514Complex
TkA07G207880LXL04_028756JCVI_TKOH_00306100.093.783 / 100.0Strict
TkA07G207910LXL04_028757JCVI_TKOH_0030667.897.872 / 78.125待复核
TkA07G208000LXL04_028759JCVI_TKOH_0030685.6100.0 / 100.0待复核
TkA07G208220LXL04_028761JCVI_TKOH_0030679.1100.0 / 100.0待复核
TkA07G210010LXL04_028764JCVI_TKOH_0030699.5100.0 / 76.694Complex
TkA07G210040LXL04_028766JCVI_TKOH_00306100.0100.0 / 83.333待复核
TkA07G211150LXL04_028771JCVI_TKOH_0030697.899.567 / 74.675Complex
TkA07G211250LXL04_028772JCVI_TKOH_0030691.891.235 / 80.858Complex
TkA07G213280LXL04_028778JCVI_TKOH_0030673.574.654 / 100.0Complex
TkA07G213750LXL04_028783JCVI_TKOH_0030698.898.098 / 75.361Probable
TkA07G214050LXL04_028786JCVI_TKOH_0030698.796.721 / 20.645待复核
TkA07G214060LXL04_028786JCVI_TKOH_0030690.996.016 / 23.084Complex
TkA07G214680LXL04_028789JCVI_TKOH_00306100.092.199 / 87.248待复核
TkA07G215890LXL04_028791JCVI_TKOH_0030699.8100.0 / 100.0Strict
TkA07G216800LXL04_028794JCVI_TKOH_00306100.098.507 / 33.545待复核
TkA07G217360LXL04_028792JCVI_TKOH_0030690.654.299 / 16.52Complex
TkA07G220850LXL04_028800JCVI_TKOH_0030690.3100.0 / 27.614待复核
TkA07G220860LXL04_028800JCVI_TKOH_0030694.8100.0 / 25.603Complex
TkA07G223350LXL04_028806JCVI_TKOH_0030694.063.359 / 58.042待复核
TkA07G226160LXL04_028811JCVI_TKOH_00306100.0100.0 / 76.037Complex
TkA07G226600LXL04_028816JCVI_TKOH_0030663.2100.0 / 80.297待复核
TkA07G226620LXL04_028817JCVI_TKOH_00306100.0100.0 / 100.0Strict
TkA07G226650LXL04_028818JCVI_TKOH_00306100.099.781 / 95.789Strict