Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00246

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 371

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00246

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00246 Chr05 107733919-119088086 Chr04 140584671-152192960 mixed High 171 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00246`	Chr05:107733919-119088086	Chr04:140584671-152192960	mixed	371	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 371 · Showing 201–371 · Page 2/2

Previous Download All Anchors TSV

TkA05G453160 → LXL04_022245

99.7%

TkA05G453170 → LXL04_022246

99.9%

TkA05G453310 → LXL04_022248

99.4%

TkA05G453320 → LXL04_022249

98.9%

TkA05G453350 → LXL04_022250

94.2%

TkA05G453410 → LXL04_022250

62.0%

TkA05G453570 → LXL04_022253

99.6%

TkA05G453610 → LXL04_022254

99.6%

TkA05G453670 → LXL04_022255

98.6%

TkA05G453680 → LXL04_022256

100.0%

TkA05G453700 → LXL04_022257

100.0%

TkA05G454030 → LXL04_022259

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA05G453160`	`LXL04_022245`	`JCVI_TKOH_00246`	99.7	100.0 / 59.032	Review
`TkA05G453170`	`LXL04_022246`	`JCVI_TKOH_00246`	99.9	100.0 / 100.0	Strict
`TkA05G453310`	`LXL04_022248`	`JCVI_TKOH_00246`	99.4	100.0 / 100.0	Complex
`TkA05G453320`	`LXL04_022249`	`JCVI_TKOH_00246`	98.9	100.0 / 100.0	Strict
`TkA05G453350`	`LXL04_022250`	`JCVI_TKOH_00246`	94.2	98.438 / 92.986	Complex
`TkA05G453410`	`LXL04_022250`	`JCVI_TKOH_00246`	62.0	95.506 / 56.914	Complex
`TkA05G453570`	`LXL04_022253`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Strict
`TkA05G453610`	`LXL04_022254`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Strict
`TkA05G453670`	`LXL04_022255`	`JCVI_TKOH_00246`	98.6	100.0 / 100.0	Strict
`TkA05G453680`	`LXL04_022256`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G453700`	`LXL04_022257`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G454030`	`LXL04_022259`	`JCVI_TKOH_00246`	100.0	100.0 / 35.027	Review
`TkA05G454080`	`LXL04_022260`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Strict
`TkA05G454090`	`LXL04_022266`	`JCVI_TKOH_00246`	89.9	93.478 / 100.0	Complex
`TkA05G454120`	`LXL04_022263`	`JCVI_TKOH_00246`	100.0	100.0 / 85.0	Complex
`TkA05G454180`	`LXL04_022266`	`JCVI_TKOH_00246`	83.5	100.0 / 100.0	Complex
`TkA05G454290`	`LXL04_022264`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G454350`	`LXL04_022265`	`JCVI_TKOH_00246`	99.3	94.095 / 100.0	Complex
`TkA05G454400`	`LXL04_022266`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G454410`	`LXL04_022267`	`JCVI_TKOH_00246`	89.4	100.0 / 100.0	Review
`TkA05G454650`	`LXL04_022271`	`JCVI_TKOH_00246`	79.4	63.433 / 40.84	Complex
`TkA05G454730`	`LXL04_022270`	`JCVI_TKOH_00246`	99.8	100.0 / 98.287	Strict
`TkA05G454740`	`LXL04_022273`	`JCVI_TKOH_00246`	98.8	100.0 / 100.0	Complex
`TkA05G455680`	`LXL04_022275`	`JCVI_TKOH_00246`	99.9	100.0 / 100.0	Strict
`TkA05G455950`	`LXL04_022278`	`JCVI_TKOH_00246`	99.4	100.0 / 65.556	Review
`TkA05G455960`	`LXL04_022279`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G455970`	`LXL04_022280`	`JCVI_TKOH_00246`	99.1	100.0 / 100.0	Strict
`TkA05G456160`	`LXL04_022282`	`JCVI_TKOH_00246`	100.0	83.747 / 100.0	Complex
`TkA05G456190`	`LXL04_022284`	`JCVI_TKOH_00246`	98.8	100.0 / 47.021	Review
`TkA05G456200`	`LXL04_022285`	`JCVI_TKOH_00246`	91.2	100.0 / 100.0	Complex
`TkA05G456390`	`LXL04_022288`	`JCVI_TKOH_00246`	95.9	100.0 / 100.0	Strict
`TkA05G456470`	`LXL04_022290`	`JCVI_TKOH_00246`	80.6	9.688 / 8.587	Complex
`TkA05G456490`	`LXL04_022289`	`JCVI_TKOH_00246`	74.6	100.0 / 21.611	Complex
`TkA05G456500`	`LXL04_022291`	`JCVI_TKOH_00246`	99.5	100.0 / 76.289	Review
`TkA05G456870`	`LXL04_022297`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G456880`	`LXL04_022296`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G456930`	`LXL04_022296`	`JCVI_TKOH_00246`	40.2	98.425 / 62.562	Complex
`TkA05G457030`	`LXL04_022290`	`JCVI_TKOH_00246`	90.3	9.688 / 8.587	Review
`TkA05G457060`	`LXL04_022293`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G457290`	`LXL04_022300`	`JCVI_TKOH_00246`	100.0	98.611 / 69.1	Complex
`TkA05G457370`	`LXL04_022300`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G457660`	`LXL04_022301`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Strict
`TkA05G457680`	`LXL04_022302`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G457690`	`LXL04_022303`	`JCVI_TKOH_00246`	100.0	100.0 / 54.366	Review
`TkA05G457700`	`LXL04_022304`	`JCVI_TKOH_00246`	99.7	100.0 / 100.0	Strict
`TkA05G457710`	`LXL04_022305`	`JCVI_TKOH_00246`	99.8	100.0 / 100.0	Strict
`TkA05G457720`	`LXL04_022306`	`JCVI_TKOH_00246`	99.2	100.0 / 100.0	Strict
`TkA05G457970`	`LXL04_022309`	`JCVI_TKOH_00246`	100.0	98.502 / 88.552	Strict
`TkA05G458100`	`LXL04_022312`	`JCVI_TKOH_00246`	92.4	100.0 / 100.0	Probable
`TkA05G458140`	`LXL04_022313`	`JCVI_TKOH_00246`	92.3	100.0 / 99.275	Probable
`TkA05G458150`	`LXL04_022314`	`JCVI_TKOH_00246`	99.7	94.081 / 56.03	Review
`TkA05G458180`	`LXL04_022316`	`JCVI_TKOH_00246`	98.9	60.349 / 27.728	Complex
`TkA05G458190`	`LXL04_022317`	`JCVI_TKOH_00246`	98.5	100.0 / 43.612	Review
`TkA05G458310`	`LXL04_022321`	`JCVI_TKOH_00246`	88.2	14.847 / 11.111	Review
`TkA05G458330`	`LXL04_022323`	`JCVI_TKOH_00246`	95.0	100.0 / 95.2	Review
`TkA05G458410`	`LXL04_022326`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G458560`	`LXL04_022327`	`JCVI_TKOH_00246`	99.0	99.388 / 47.717	Review
`TkA05G458580`	`LXL04_022328`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G458630`	`LXL04_022329`	`JCVI_TKOH_00246`	99.2	100.0 / 100.0	Complex
`TkA05G458700`	`LXL04_022330`	`JCVI_TKOH_00246`	98.2	100.0 / 100.0	Strict
`TkA05G458870`	`LXL04_022331`	`JCVI_TKOH_00246`	93.9	100.0 / 97.172	Probable
`TkA05G459180`	`LXL04_022333`	`JCVI_TKOH_00246`	71.8	71.0 / 52.616	Complex
`TkA05G460330`	`LXL04_022335`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G461160`	`LXL04_022341`	`JCVI_TKOH_00246`	99.2	100.0 / 89.13	Complex
`TkA05G461650`	`LXL04_022346`	`JCVI_TKOH_00246`	55.5	100.0 / 100.0	Review
`TkA05G461780`	`LXL04_022348`	`JCVI_TKOH_00246`	99.5	100.0 / 94.602	Strict
`TkA05G461970`	`LXL04_022350`	`JCVI_TKOH_00246`	95.9	100.0 / 68.72	Review
`TkA05G461980`	`LXL04_022351`	`JCVI_TKOH_00246`	98.0	100.0 / 100.0	Strict
`TkA05G461990`	`LXL04_022352`	`JCVI_TKOH_00246`	98.0	100.0 / 74.548	Probable
`TkA05G462000`	`LXL04_022353`	`JCVI_TKOH_00246`	95.3	100.0 / 100.0	Review
`TkA05G462030`	`LXL04_022354`	`JCVI_TKOH_00246`	99.1	24.777 / 24.777	Review
`TkA05G462430`	`LXL04_022355`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Strict
`TkA05G462780`	`LXL04_022358`	`JCVI_TKOH_00246`	91.8	87.346 / 90.265	Probable
`TkA05G462790`	`LXL04_022359`	`JCVI_TKOH_00246`	99.0	88.596 / 47.642	Review
`TkA05G462900`	`LXL04_022360`	`JCVI_TKOH_00246`	90.3	100.0 / 100.0	Probable
`TkA05G462920`	`LXL04_022364`	`JCVI_TKOH_00246`	70.8	100.0 / 100.0	Complex
`TkA05G462970`	`LXL04_022361`	`JCVI_TKOH_00246`	99.8	100.0 / 96.792	Complex
`TkA05G463210`	`LXL04_022364`	`JCVI_TKOH_00246`	91.3	100.0 / 46.705	Complex
`TkA05G463230`	`LXL04_022362`	`JCVI_TKOH_00246`	100.0	35.025 / 6.194	Complex
`TkA05G463560`	`LXL04_022364`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G463570`	`LXL04_022366`	`JCVI_TKOH_00246`	98.3	100.0 / 100.0	Strict
`TkA05G463640`	`LXL04_022369`	`JCVI_TKOH_00246`	78.9	97.071 / 91.045	Complex
`TkA05G463660`	`LXL04_022370`	`JCVI_TKOH_00246`	94.7	100.0 / 98.662	Probable
`TkA05G463670`	`LXL04_022371`	`JCVI_TKOH_00246`	97.6	97.455 / 100.0	Strict
`TkA05G463680`	`LXL04_022372`	`JCVI_TKOH_00246`	98.7	100.0 / 100.0	Strict
`TkA05G463770`	`LXL04_022373`	`JCVI_TKOH_00246`	70.4	99.083 / 74.85	Complex
`TkA05G463790`	`LXL04_022374`	`JCVI_TKOH_00246`	91.0	22.112 / 26.172	Review
`TkA05G463800`	`LXL04_022376`	`JCVI_TKOH_00246`	96.8	100.0 / 100.0	Strict
`TkA05G463810`	`LXL04_022377`	`JCVI_TKOH_00246`	81.7	98.709 / 78.36	Review
`TkA05G464120`	`LXL04_022389`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G464150`	`LXL04_022388`	`JCVI_TKOH_00246`	96.2	97.093 / 99.388	Complex
`TkA05G464180`	`LXL04_022386`	`JCVI_TKOH_00246`	99.0	100.0 / 100.0	Complex
`TkA05G464190`	`LXL04_022385`	`JCVI_TKOH_00246`	93.2	83.908 / 99.303	Complex
`TkA05G464210`	`LXL04_022384`	`JCVI_TKOH_00246`	81.8	100.0 / 91.47	Complex
`TkA05G464260`	`LXL04_022390`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G464270`	`LXL04_022391`	`JCVI_TKOH_00246`	99.5	100.0 / 100.0	Strict
`TkA05G464280`	`LXL04_022392`	`JCVI_TKOH_00246`	100.0	100.0 / 83.039	Complex
`TkA05G464310`	`LXL04_022384`	`JCVI_TKOH_00246`	81.4	100.0 / 91.47	Complex
`TkA05G464320`	`LXL04_022385`	`JCVI_TKOH_00246`	97.3	84.483 / 100.0	Review
`TkA05G464340`	`LXL04_022386`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Complex
`TkA05G464350`	`LXL04_022388`	`JCVI_TKOH_00246`	97.2	97.093 / 99.388	Complex
`TkA05G464360`	`LXL04_022389`	`JCVI_TKOH_00246`	99.4	100.0 / 100.0	Complex
`TkA05G464670`	`LXL04_022395`	`JCVI_TKOH_00246`	98.0	100.0 / 66.846	Review
`TkA05G464740`	`LXL04_022397`	`JCVI_TKOH_00246`	98.8	100.0 / 100.0	Strict
`TkA05G464800`	`LXL04_022397`	`JCVI_TKOH_00246`	67.7	76.667 / 11.517	Complex
`TkA05G464810`	`LXL04_022399`	`JCVI_TKOH_00246`	99.5	100.0 / 100.0	Strict
`TkA05G464840`	`LXL04_022400`	`JCVI_TKOH_00246`	99.2	100.0 / 11.499	Review
`TkA05G464910`	`LXL04_022401`	`JCVI_TKOH_00246`	99.2	100.0 / 100.0	Strict
`TkA05G464940`	`LXL04_022402`	`JCVI_TKOH_00246`	98.0	100.0 / 100.0	Strict
`TkA05G464950`	`LXL04_022403`	`JCVI_TKOH_00246`	98.5	100.0 / 100.0	Strict
`TkA05G465030`	`LXL04_022404`	`JCVI_TKOH_00246`	100.0	94.197 / 98.583	Complex
`TkA05G465040`	`LXL04_022405`	`JCVI_TKOH_00246`	99.3	98.944 / 50.906	Review
`TkA05G465100`	`LXL04_022407`	`JCVI_TKOH_00246`	97.9	100.0 / 100.0	Strict
`TkA05G465210`	`LXL04_022408`	`JCVI_TKOH_00246`	99.3	100.0 / 100.0	Strict
`TkA05G465220`	`LXL04_022409`	`JCVI_TKOH_00246`	99.2	99.457 / 100.0	Strict
`TkA05G465290`	`LXL04_022410`	`JCVI_TKOH_00246`	98.9	99.372 / 53.107	Review
`TkA05G465300`	`LXL04_022411`	`JCVI_TKOH_00246`	80.2	98.618 / 97.813	Review
`TkA05G465370`	`LXL04_022413`	`JCVI_TKOH_00246`	99.2	59.132 / 32.826	Complex
`TkA05G465380`	`LXL04_022415`	`JCVI_TKOH_00246`	97.7	100.0 / 100.0	Complex
`TkA05G465400`	`LXL04_022418`	`JCVI_TKOH_00246`	98.4	100.0 / 89.443	Complex
`TkA05G465590`	`LXL04_022420`	`JCVI_TKOH_00246`	64.9	46.904 / 35.75	Complex
`TkA05G465760`	`LXL04_022421`	`JCVI_TKOH_00246`	92.4	99.468 / 20.458	Complex
`TkA05G465800`	`LXL04_022421`	`JCVI_TKOH_00246`	84.4	97.692 / 40.396	Complex
`TkA05G465850`	`LXL04_022424`	`JCVI_TKOH_00246`	94.2	100.0 / 97.297	Complex
`TkA05G465930`	`LXL04_022427`	`JCVI_TKOH_00246`	52.5	100.0 / 100.0	Review
`TkA05G465960`	`LXL04_022428`	`JCVI_TKOH_00246`	99.7	100.0 / 100.0	Strict
`TkA05G465970`	`LXL04_022429`	`JCVI_TKOH_00246`	90.2	99.474 / 84.195	Complex
`TkA05G465980`	`LXL04_022413`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G465990`	`LXL04_022415`	`JCVI_TKOH_00246`	99.8	100.0 / 100.0	Complex
`TkA05G466660`	`LXL04_022418`	`JCVI_TKOH_00246`	98.8	100.0 / 100.0	Complex
`TkA05G467830`	`LXL04_022420`	`JCVI_TKOH_00246`	96.8	100.0 / 51.902	Review
`TkA05G467850`	`LXL04_022421`	`JCVI_TKOH_00246`	97.2	100.0 / 39.355	Review
`TkA05G468000`	`LXL04_022422`	`JCVI_TKOH_00246`	99.9	100.0 / 84.198	Strict
`TkA05G468050`	`LXL04_022424`	`JCVI_TKOH_00246`	100.0	100.0 / 62.162	Complex
`TkA05G468580`	`LXL04_022439`	`JCVI_TKOH_00246`	98.9	91.781 / 91.781	Complex
`TkA05G468590`	`LXL04_022441`	`JCVI_TKOH_00246`	67.5	98.586 / 21.436	Complex
`TkA05G468720`	`LXL04_022434`	`JCVI_TKOH_00246`	94.0	100.0 / 94.063	Probable
`TkA05G468730`	`LXL04_022441`	`JCVI_TKOH_00246`	98.1	95.385 / 10.161	Review
`TkA05G469190`	`LXL04_022449`	`JCVI_TKOH_00246`	100.0	70.192 / 100.0	Probable
`TkA05G469850`	`LXL04_022452`	`JCVI_TKOH_00246`	99.7	100.0 / 100.0	Strict
`TkA05G469860`	`LXL04_022453`	`JCVI_TKOH_00246`	99.8	100.0 / 100.0	Strict
`TkA05G470370`	`LXL04_022457`	`JCVI_TKOH_00246`	100.0	77.698 / 100.0	Probable
`TkA05G470440`	`LXL04_022469`	`JCVI_TKOH_00246`	100.0	87.243 / 32.666	Review
`TkA05G470590`	`LXL04_022470`	`JCVI_TKOH_00246`	95.9	100.0 / 100.0	Strict
`TkA05G470610`	`LXL04_022471`	`JCVI_TKOH_00246`	99.4	100.0 / 100.0	Review
`TkA05G470620`	`LXL04_022472`	`JCVI_TKOH_00246`	97.7	100.0 / 100.0	Strict
`TkA05G470760`	`LXL04_022475`	`JCVI_TKOH_00246`	99.6	100.0 / 82.595	Strict
`TkA05G470840`	`LXL04_022477`	`JCVI_TKOH_00246`	99.7	100.0 / 100.0	Strict
`TkA05G470930`	`LXL04_022478`	`JCVI_TKOH_00246`	49.1	73.632 / 45.436	Review
`TkA05G471020`	`LXL04_022480`	`JCVI_TKOH_00246`	98.5	99.234 / 90.244	Strict
`TkA05G471060`	`LXL04_022481`	`JCVI_TKOH_00246`	100.0	96.373 / 74.699	Probable
`TkA05G471250`	`LXL04_022489`	`JCVI_TKOH_00246`	99.7	100.0 / 77.175	Probable
`TkA05G471260`	`LXL04_022490`	`JCVI_TKOH_00246`	92.1	100.0 / 100.0	Probable
`TkA05G471720`	`LXL04_022495`	`JCVI_TKOH_00246`	83.3	100.0 / 100.0	Complex
`TkA05G472150`	`LXL04_022497`	`JCVI_TKOH_00246`	100.0	100.0 / 85.811	Strict
`TkA05G472170`	`LXL04_022499`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G472200`	`LXL04_022500`	`JCVI_TKOH_00246`	99.8	100.0 / 100.0	Strict
`TkA05G472330`	`LXL04_022502`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Strict
`TkA05G472550`	`LXL04_022505`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G472780`	`LXL04_022506`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G472790`	`LXL04_022507`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G472800`	`LXL04_022508`	`JCVI_TKOH_00246`	99.6	100.0 / 100.0	Complex
`TkA05G473360`	`LXL04_022512`	`JCVI_TKOH_00246`	100.0	100.0 / 96.889	Complex
`TkA05G473700`	`LXL04_022515`	`JCVI_TKOH_00246`	99.3	100.0 / 100.0	Strict
`TkA05G473740`	`LXL04_022516`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G473790`	`LXL04_022517`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Strict
`TkA05G473800`	`LXL04_022518`	`JCVI_TKOH_00246`	100.0	100.0 / 100.0	Review
`TkA05G474210`	`LXL04_022521`	`JCVI_TKOH_00246`	84.7	100.0 / 100.0	Review
`TkA05G474220`	`LXL04_022522`	`JCVI_TKOH_00246`	100.0	90.0 / 46.875	Review
`TkA05G474350`	`LXL04_022523`	`JCVI_TKOH_00246`	81.5	100.0 / 100.0	Review
`TkA05G474360`	`LXL04_022522`	`JCVI_TKOH_00246`	94.4	90.0 / 46.875	Complex