ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 9 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA04G043840
Chr04:11793095-11797925 (-)
GWHBCHF00000005
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
90.800 Q 93.540 / T 35.711 |
JCVI_TKOH_00189 | TkA04G043840 |
|
TkA04G043850
Chr04:11800366-11800725 (-)
GWHBCHF00000005
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Many-to-one | non reciprocal best hit Complex |
97.400 Q 32.773 / T 1.854 |
JCVI_TKOH_00189 | TkA04G043850 |
|
TkA04G043870
Chr04:11803485-11806176 (-)
GWHBCHF00000005
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
100.000 Q 89.683 / T 16.120 |
JCVI_TKOH_00189 | TkA04G043870 |
|
TkA05G437100
Chr05:109144639-109147817 (+)
GWHBCHF00000006
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Many-to-one | non reciprocal best hit Complex |
64.100 Q 80.627 / T 13.505 |
TkA05G437100 | |
|
TkA06G028360
Chr06:7685709-7690419 (-)
GWHBCHF00000007
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Many-to-one | non reciprocal best hit Complex |
24.400 Q 79.832 / T 9.035 |
TkA06G028360 | |
|
TkA08G052570
Chr08:13433955-13437020 (+)
GWHBCHF00000009
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Many-to-one | non reciprocal best hit Complex |
70.800 Q 100.000 / T 11.222 |
TkA08G052570 | |
|
TkAUNG094550
ChrUn:26724894-26727574 (+)
GWHBCHF00000001
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
100.000 Q 89.683 / T 16.120 |
TkAUNG094550 | |
|
TkAUNG094560
ChrUn:26727993-26730686 (+)
GWHBCHF00000001
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Many-to-one | non reciprocal best hit Complex |
73.200 Q 24.063 / T 12.791 |
TkAUNG094560 | |
|
TkAUNG094570
ChrUn:26733141-26737923 (+)
GWHBCHF00000001
|
LXL04_036456
Chr08:42509063-42521620 (+)
CM104806.1
|
Many-to-one | non reciprocal best hit Complex |
93.200 Q 87.586 / T 18.212 |
TkAUNG094570 |
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