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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G414080
Reference: TK1151 Chr: Chr08 Coordinates: 105418453-105422403 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3098 bp · TkA08G414080|TK1151|cDNA

CTATCTTTTAAAGCCTATATAAATAATAAATGTATATAGCATTTTTTTGTTGGCAACTTGGAATTTGTAGATAGGTTTTGGCCGGGCAAGATTCTAAATTAGTGACTTAGTGGCATTTGGTGGGAAGTGGGCTGCTTCCATTTCGGGTCAATTCTTTGCATCTGACCACACCTTTCAAATTCCTAGAAATTAAGATTGGGGTGAAGTTTGATTTTGCTTTCCAACTTTCAAATATTCCATTTTGCCCTGTCCTGTTTGAT...

CDS

Download CDS FASTA

2427 bp · TkA08G414080|TK1151|CDS

ATGAGTTTTACCAGTAAAACCCAAAAAAGCATCCACCTTATTTTTTTCATCGTTCTTCTTCACTTTGTCCCTGTGTTTCCGCAAACAAACAACAGCAGAATCGATCAAGGTCAAGTGCTTAGAGATGGCGAAACCATTGTTTCCCCTACTCAGGTTTTCGAGCTCGGATTCTTCAGCCTTAGTAATCCAAGCTTTAAATACGTCGGAATCTGGTATTACGGATTTCAGAACCGAACAGTCGCGTGGATAGCGAATAGAAA...

Protein

Download Protein FASTA

808 aa · TkA08G414080|TK1151|PROTEIN

MSFTSKTQKSIHLIFFIVLLHFVPVFPQTNNSRIDQGQVLRDGETIVSPTQVFELGFFSLSNPSFKYVGIWYYGFQNRTVAWIANRNNPISGDSGVFSIGTDGSLIVSDRNDRVYWSSNSSSDSVGSNLTAMLMDNGNLMLSTVQNVGIDREAIWRSCDHPTDTYLPNQRIYLNITNGDSRNFVSWRSPNDPSEGNYSMGIDPRGSPQVVVHDDQSRRRLWRSGHWNNQIFIGIPQMRSLFLYGFNLVNVNDELMYFVFN...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G414080
TK1151 IDTkA08G414080
OH-1004 IDLXL04_016429
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)45.100
Protein coverage (%)TK1151 95.792 / OH-1004 90.920
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G414080
LocationChr08:105418453-105422403 (+)
DescriptionSimilar to At4g27290: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g21390 G-type lectin S-receptor-like serine/threonine-protein kinase B120. No verified direct reference in this release
At1g61610 Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610. No verified direct reference in this release
At1g11350 Receptor-like serine/threonine-protein kinase that represses the disease resistance signaling pathway triggered in response to bacterial pathogen such as Pseudomonas syringae pv. tomato.
An S-locus receptor-like kinase plays a role as a negative regulator in plant defense responses.2009 · DOI: 10.1016/j.bbrc.2009.02.050
At1g11300 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300. No verified direct reference in this release
At1g11330 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_016429 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0006955 immune response Biological Process
GO:0007165 signal transduction Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0071215 cellular response to abscisic acid stimulus Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005773 vacuole Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-reference
ath:AT1G65790
ath:AT1G65800
ath:AT4G21380
ath:AT4G27290
ath:AT4G27300
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.869
Rank 1 · TkA08G414080 · TK1151
Endoplasmic reticulum0.080
Rank 2 · TkA08G414080 · TK1151
Cytoplasm0.070
Rank 3 · TkA08G414080 · TK1151
Nucleus0.040
Rank 4 · TkA08G414080 · TK1151
Lysosome / Vacuole0.025
Rank 5 · TkA08G414080 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF09716ETRAMP12-33 aa
PF01453B_lectin79-187 aa
PF00954S_locus_glycop221-331 aa
PF01453B_lectin246-275 aa
PF08276PAN_2348-408 aa
PF09716ETRAMP382-461 aa
PF14914LRRC37AB_C434-457 aa
PF11346DUF3149446-463 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G414080PF09716ETRAMP12330.07513.7
TkA08G414080PF01453B_lectin791871.4e-2796.9
TkA08G414080PF00954S_locus_glycop2213311.2e-28100.6
TkA08G414080PF01453B_lectin2462751.4e-2796.9
TkA08G414080PF08276PAN_23484081.8e-1660.7
TkA08G414080PF09716ETRAMP3824610.07513.7
TkA08G414080PF14914LRRC37AB_C4344570.2611.9
TkA08G414080PF11346DUF31494464630.1112.7
TkA08G414080PF00069Pkinase5217885.8e-44151.2
TkA08G414080PF07714PK_Tyr_Ser-Thr5247894.9e-47161.1
TkA08G414080PF03109ABC15275500.0007519.4
TkA08G414080PF03109ABC15886710.0007519.4
TkA08G414080PF01636APH6366690.01316.0
TkA08G414080PF12330Haspin_kinase6376730.02414.4
TkA08G414080PF17667Pkinase_fungal6407090.1511.5
TkA08G414080PF17667Pkinase_fungal7677980.1511.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O81906Arabidopsis thalianasp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B12053.000%Swiss-ProtHigh
Q9SY89Arabidopsis thalianasp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g6161046.700%Swiss-ProtMedium
Q9LPZ9Arabidopsis thalianasp|Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1344.800%Swiss-ProtMedium
Q9SXB4Arabidopsis thalianasp|Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g1130045.300%Swiss-ProtMedium
Q9SXB8Arabidopsis thalianasp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g1133043.900%Swiss-ProtMedium

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