Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1820 bp · TkA02G406680|TK1151|cDNA
CGCTTAACAGACCCCGCTATACCATCATCTTCTCTCTCGCATGAAAATTTTGTGAAGTTTAGAGGGTGAGAGCAGAGCGAGAGAAGCTAGTTATGGCGTTTTCTAGGGTTGGCGTCTTGTTGTGTTTTTTTGTAGTTCTATCATCGACTGTATCGATCTCTTCTGCTTCTGAGGAGGAGAAAGAATATGTATTTACTTTGGATCACTCGAATTTTTCGGAGATTGTGTCAAAACACAATTTCATCGTCGTTGAATTCTAT...
1482 bp · TkA02G406680|TK1151|CDS
ATGGCGTTTTCTAGGGTTGGCGTCTTGTTGTGTTTTTTTGTAGTTCTATCATCGACTGTATCGATCTCTTCTGCTTCTGAGGAGGAGAAAGAATATGTATTTACTTTGGATCACTCGAATTTTTCGGAGATTGTGTCAAAACACAATTTCATCGTCGTTGAATTCTATGCTCCTTGGTGTGGTCATTGTAAGCATCTTGCTCCAGAGTATGAAAAAGCTGCATCGGTGTTGTCAAGCCACGACCCCGTAATTGCGTTGGC...
Protein
Download Protein FASTA493 aa · TkA02G406680|TK1151|PROTEIN
MAFSRVGVLLCFFVVLSSTVSISSASEEEKEYVFTLDHSNFSEIVSKHNFIVVEFYAPWCGHCKHLAPEYEKAASVLSSHDPVIALAKVDANAEENKELAEKFEIQGFPTIKIFRNGGKDMQDYKGPREADGIVTYLKKQVGPASIEIKTAQDAESVIDDKKIFIVGIFPKFSGEEFDNFMILAEKMRSDYDFGHTTSAKLIPRGESSITKPTLRLLKPFDELFVDSKEFKVDAMEKFIEESSTPLVTLFDQSPEYSSFL...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G406680 |
|---|---|
| TK1151 ID | TkA02G406680 |
| OH-1004 ID | LXL04_003381 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 69.800 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G406680 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:103394862-103397987 (+) | |||||||||
| Description | Similar to Protein disulfide-isomerase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006457 protein folding Biological Process GO:0009793 embryo development ending in seed dormancy Biological Process GO:0009960 endosperm development Biological Process GO:0010043 response to zinc ion Biological Process GO:0034975 protein folding in endoplasmic reticulum Biological Process GO:0034976 response to endoplasmic reticulum stress Biological Process GO:0043067 regulation of programmed cell death Biological Process GO:0048316 seed development Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0000326 protein storage vacuole Cellular Component GO:0000327 lytic vacuole within protein storage vacuole Cellular Component GO:0005634 nucleus Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G21750 dosa:Os11g0199200 rcu:8281065 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF04756OST3_OST628-158 aaPF00085Thioredoxin33-139 aaPF07912ERp29_N34-140 aaPF20207PedC-like35-117 aaPF26959Thioredoxin-like_N35-133 aaPF13098Thioredoxin_242-139 aaPF00578AhpC-TSA43-93 aaPF08534Redoxin47-85 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G406680 | PF04756 | OST3_OST6 | 28 | 158 | 4.4e-14 | 53.3 |
| TkA02G406680 | PF00085 | Thioredoxin | 33 | 139 | 3e-56 | 188.5 |
| TkA02G406680 | PF07912 | ERp29_N | 34 | 140 | 1.7e-08 | 35.4 |
| TkA02G406680 | PF20207 | PedC-like | 35 | 117 | 6.7e-06 | 26.8 |
| TkA02G406680 | PF26959 | Thioredoxin-like_N | 35 | 133 | 0.0003 | 21.4 |
| TkA02G406680 | PF13098 | Thioredoxin_2 | 42 | 139 | 1.6e-13 | 51.7 |
| TkA02G406680 | PF00578 | AhpC-TSA | 43 | 93 | 3.8e-05 | 24.3 |
| TkA02G406680 | PF08534 | Redoxin | 47 | 85 | 0.00026 | 21.5 |
| TkA02G406680 | PF13728 | TraF | 50 | 121 | 0.027 | 15.1 |
| TkA02G406680 | PF13905 | Thioredoxin_8 | 51 | 78 | 4.7e-08 | 34.1 |
| TkA02G406680 | PF13899 | Thioredoxin_7 | 51 | 114 | 1.2e-07 | 32.5 |
| TkA02G406680 | PF14595 | Thioredoxin_9 | 53 | 77 | 0.0029 | 18.2 |
| TkA02G406680 | PF00462 | Glutaredoxin | 55 | 113 | 4e-05 | 24.5 |
| TkA02G406680 | PF13905 | Thioredoxin_8 | 89 | 119 | 4.7e-08 | 34.1 |
| TkA02G406680 | PF07449 | HyaE | 90 | 117 | 0.0015 | 19.3 |
| TkA02G406680 | PF13848 | Thioredoxin_6 | 96 | 166 | 7.5e-29 | 101.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.