Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00308
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 22
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00308The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00308 |
Chr07:78417237-79610767 | Chr06:90459391-91858583 | mixed | 22 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 22 · Showing 1–22 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA07G312470 | LXL04_029459 | JCVI_TKOH_00308 | 99.4 | 97.708 / 63.265 | Review |
TkA07G312970 | LXL04_029462 | JCVI_TKOH_00308 | 93.2 | 100.0 / 100.0 | Probable |
TkA07G313200 | LXL04_029464 | JCVI_TKOH_00308 | 72.5 | 100.0 / 50.147 | Complex |
TkA07G313420 | LXL04_029465 | JCVI_TKOH_00308 | 99.6 | 100.0 / 100.0 | Complex |
TkA07G313430 | LXL04_029466 | JCVI_TKOH_00308 | 100.0 | 67.907 / 73.737 | Review |
TkA07G313720 | LXL04_029467 | JCVI_TKOH_00308 | 99.1 | 97.028 / 73.237 | Probable |
TkA07G314540 | LXL04_029472 | JCVI_TKOH_00308 | 85.5 | 94.754 / 83.882 | Review |
TkA07G314630 | LXL04_029475 | JCVI_TKOH_00308 | 100.0 | 65.094 / 93.243 | Review |
TkA07G314640 | LXL04_029476 | JCVI_TKOH_00308 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G315240 | LXL04_029479 | JCVI_TKOH_00308 | 99.8 | 100.0 / 100.0 | Complex |
TkA07G316120 | LXL04_029452 | JCVI_TKOH_00308 | 98.8 | 100.0 / 100.0 | Complex |
TkA07G316320 | LXL04_029451 | JCVI_TKOH_00308 | 99.6 | 100.0 / 100.0 | Complex |
TkA07G316350 | LXL04_029449 | JCVI_TKOH_00308 | 85.8 | 88.319 / 79.295 | Review |
TkA07G316460 | LXL04_029448 | JCVI_TKOH_00308 | 95.2 | 100.0 / 100.0 | Strict |
TkA07G316660 | LXL04_029447 | JCVI_TKOH_00308 | 84.6 | 100.0 / 100.0 | Review |
TkA07G316680 | LXL04_029446 | JCVI_TKOH_00308 | 97.8 | 99.277 / 88.337 | Strict |
TkA07G316790 | LXL04_029445 | JCVI_TKOH_00308 | 100.0 | 94.853 / 91.489 | Complex |
TkA07G317250 | LXL04_029442 | JCVI_TKOH_00308 | 99.8 | 100.0 / 100.0 | Complex |
TkA07G317310 | LXL04_029439 | JCVI_TKOH_00308 | 84.4 | 87.595 / 88.813 | Review |
TkA07G317440 | LXL04_029438 | JCVI_TKOH_00308 | 99.2 | 100.0 / 100.0 | Review |
TkA07G317470 | LXL04_029437 | JCVI_TKOH_00308 | 100.0 | 100.0 / 100.0 | Strict |
TkA07G317620 | LXL04_029433 | JCVI_TKOH_00308 | 79.3 | 100.0 / 99.14 | Review |