Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00075
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 10
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00075The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00075 |
Chr02:157497521-157578099 | Chr02:163782334-163868918 | + | 10 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 10 · Showing 1–10 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA02G610490 | LXL04_011397 | JCVI_TKOH_00075 | 99.7 | 99.19 / 99.512 | Probable |
TkA02G610500 | LXL04_011398 | JCVI_TKOH_00075 | 98.6 | 100.0 / 59.574 | Review |
TkA02G610510 | LXL04_011399 | JCVI_TKOH_00075 | 99.3 | 100.0 / 100.0 | Probable |
TkA02G610630 | LXL04_011401 | JCVI_TKOH_00075 | 100.0 | 100.0 / 100.0 | Probable |
TkA02G610640 | LXL04_011400 | JCVI_TKOH_00075 | 100.0 | 100.0 / 49.407 | Review |
TkA02G610650 | LXL04_011402 | JCVI_TKOH_00075 | 100.0 | 72.289 / 50.209 | Review |
TkA02G610660 | LXL04_011403 | JCVI_TKOH_00075 | 99.1 | 100.0 / 100.0 | Complex |
TkA02G610690 | LXL04_011403 | JCVI_TKOH_00075 | 100.0 | 86.29 / 50.235 | Review |
TkA02G610760 | LXL04_011404 | JCVI_TKOH_00075 | 99.0 | 98.366 / 70.794 | Probable |
TkA02G610800 | LXL04_011407 | JCVI_TKOH_00075 | 97.3 | 88.281 / 43.295 | Review |