同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00031
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 39
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00031

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00031 Chr01 112026631-113952609 Chr01 46359351-47725617 mixed High 39 anchors
Chr01 112026631-113952609 Chr01 46359351-47725617 JCVI_TKOH_00031 · 39 gene pairs TkA01G448630 | LXL04_002390 | 89.2% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G448640 | LXL04_002389 | 99.1% | RBH_high_identity_coverage_synteny | Strict TkA01G448650 | LXL04_002388 | 93.6% | RBH_sequence_supported | Probable TkA01G449130 | LXL04_002386 | 79.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G449210 | LXL04_002381 | 91.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G449450 | LXL04_002379 | 85.2% | multi_source_to_OH1004 | Complex TkA01G449500 | LXL04_002378 | 100.0% | multi_source_to_OH1004 | Complex TkA01G449570 | LXL04_002377 | 99.3% | RBH_sequence_supported | Probable TkA01G449580 | LXL04_002376 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA01G451690 | LXL04_002371 | 60.6% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G451960 | LXL04_002364 | 83.6% | non_reciprocal_best_hit | Complex TkA01G452060 | LXL04_002363 | 96.6% | non_reciprocal_best_hit | Complex
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00031 Chr01:112026631-113952609 Chr01:46359351-47725617 mixed 39 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 39 · 当前范围 1–39 · 页码 1/1

TkA01G448630 → LXL04_002390
89.2%
TkA01G448640 → LXL04_002389
99.1%
TkA01G448650 → LXL04_002388
93.6%
TkA01G449130 → LXL04_002386
79.1%
TkA01G449210 → LXL04_002381
91.6%
TkA01G449450 → LXL04_002379
85.2%
TkA01G449500 → LXL04_002378
100.0%
TkA01G449570 → LXL04_002377
99.3%
TkA01G449580 → LXL04_002376
99.6%
TkA01G451690 → LXL04_002371
60.6%
TkA01G451960 → LXL04_002364
83.6%
TkA01G452060 → LXL04_002363
96.6%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G448630LXL04_002390JCVI_TKOH_0003189.2100.0 / 100.0待复核
TkA01G448640LXL04_002389JCVI_TKOH_0003199.1100.0 / 100.0Strict
TkA01G448650LXL04_002388JCVI_TKOH_0003193.6100.0 / 100.0Probable
TkA01G449130LXL04_002386JCVI_TKOH_0003179.199.454 / 39.887待复核
TkA01G449210LXL04_002381JCVI_TKOH_0003191.660.784 / 80.541待复核
TkA01G449450LXL04_002379JCVI_TKOH_0003185.2100.0 / 100.0Complex
TkA01G449500LXL04_002378JCVI_TKOH_00031100.0100.0 / 100.0Complex
TkA01G449570LXL04_002377JCVI_TKOH_0003199.397.945 / 72.959Probable
TkA01G449580LXL04_002376JCVI_TKOH_0003199.6100.0 / 100.0Strict
TkA01G451690LXL04_002371JCVI_TKOH_0003160.6100.0 / 100.0待复核
TkA01G451960LXL04_002364JCVI_TKOH_0003183.624.108 / 78.83Complex
TkA01G452060LXL04_002363JCVI_TKOH_0003196.673.418 / 30.851Complex
TkA01G452130LXL04_002367JCVI_TKOH_00031100.0100.0 / 100.0Strict
TkA01G452210LXL04_002364JCVI_TKOH_0003196.196.194 / 78.273Probable
TkA01G452220LXL04_002363JCVI_TKOH_0003199.7100.0 / 100.0Strict
TkA01G452260LXL04_002362JCVI_TKOH_00031100.0100.0 / 74.634Complex
TkA01G452470LXL04_002360JCVI_TKOH_0003199.094.608 / 99.485待复核
TkA01G452600LXL04_002359JCVI_TKOH_00031100.0100.0 / 100.0Complex
TkA01G452610LXL04_002358JCVI_TKOH_00031100.0100.0 / 100.0Strict
TkA01G452860LXL04_002355JCVI_TKOH_0003185.299.435 / 33.911Complex
TkA01G452870LXL04_002355JCVI_TKOH_0003196.697.222 / 33.719待复核
TkA01G452900LXL04_002355JCVI_TKOH_00031100.0100.0 / 26.975待复核
TkA01G452910LXL04_002354JCVI_TKOH_0003199.9100.0 / 100.0Strict
TkA01G452930LXL04_002353JCVI_TKOH_0003199.2100.0 / 100.0Strict
TkA01G452960LXL04_002352JCVI_TKOH_00031100.0100.0 / 100.0待复核
TkA01G452970LXL04_002351JCVI_TKOH_0003188.695.833 / 80.366待复核
TkA01G453020LXL04_002350JCVI_TKOH_0003199.498.837 / 92.896Complex
TkA01G453050LXL04_002349JCVI_TKOH_0003198.854.153 / 60.935Complex
TkA01G453230LXL04_002348JCVI_TKOH_0003198.587.111 / 84.483Strict
TkA01G453250LXL04_002347JCVI_TKOH_0003179.393.6 / 60.87待复核
TkA01G453260LXL04_002346JCVI_TKOH_0003184.3100.0 / 99.422待复核
TkA01G453330LXL04_002345JCVI_TKOH_0003199.797.849 / 100.0Strict
TkA01G453990LXL04_002340JCVI_TKOH_0003198.282.266 / 49.701待复核
TkA01G454000LXL04_002339JCVI_TKOH_0003199.490.452 / 68.182待复核
TkA01G454040LXL04_002338JCVI_TKOH_0003199.2100.0 / 17.687待复核
TkA01G454050LXL04_002337JCVI_TKOH_0003178.1100.0 / 100.0待复核
TkA01G454130LXL04_002336JCVI_TKOH_0003199.3100.0 / 100.0Strict
TkA01G454330LXL04_002335JCVI_TKOH_00031100.099.388 / 97.598Complex
TkA01G454690LXL04_002334JCVI_TKOH_0003199.481.218 / 94.395Strict