Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00003
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 21
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00003The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00003 |
Chr01:7210066-7919350 | Chr01:169148327-169843587 | mixed | 21 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 21 · Showing 1–21 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA01G028230 | LXL04_005607 | JCVI_TKOH_00003 | 56.1 | 23.347 / 11.48 | Complex |
TkA01G028250 | LXL04_005608 | JCVI_TKOH_00003 | 100.0 | 99.702 / 97.668 | Strict |
TkA01G028270 | LXL04_005609 | JCVI_TKOH_00003 | 100.0 | 100.0 / 48.958 | Review |
TkA01G028340 | LXL04_005610 | JCVI_TKOH_00003 | 100.0 | 88.308 / 85.928 | Strict |
TkA01G028390 | LXL04_005612 | JCVI_TKOH_00003 | 96.7 | 99.397 / 100.0 | Strict |
TkA01G028540 | LXL04_005615 | JCVI_TKOH_00003 | 97.0 | 100.0 / 96.403 | Review |
TkA01G028810 | LXL04_005618 | JCVI_TKOH_00003 | 97.7 | 68.75 / 75.862 | Review |
TkA01G028930 | LXL04_005619 | JCVI_TKOH_00003 | 90.7 | 93.371 / 100.0 | Probable |
TkA01G028940 | LXL04_005620 | JCVI_TKOH_00003 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G028960 | LXL04_005621 | JCVI_TKOH_00003 | 98.6 | 100.0 / 100.0 | Strict |
TkA01G028970 | LXL04_005624 | JCVI_TKOH_00003 | 89.7 | 99.594 / 98.687 | Review |
TkA01G029140 | LXL04_005626 | JCVI_TKOH_00003 | 94.0 | 98.661 / 70.393 | Probable |
TkA01G029380 | LXL04_005630 | JCVI_TKOH_00003 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G030090 | LXL04_005633 | JCVI_TKOH_00003 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G030240 | LXL04_005636 | JCVI_TKOH_00003 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G030260 | LXL04_005637 | JCVI_TKOH_00003 | 100.0 | 100.0 / 100.0 | Strict |
TkA01G030350 | LXL04_005639 | JCVI_TKOH_00003 | 99.2 | 100.0 / 83.562 | Review |
TkA01G030360 | LXL04_005640 | JCVI_TKOH_00003 | 98.3 | 100.0 / 100.0 | Review |
TkA01G030370 | LXL04_005641 | JCVI_TKOH_00003 | 95.6 | 100.0 / 100.0 | Strict |
TkA01G030750 | LXL04_005643 | JCVI_TKOH_00003 | 100.0 | 100.0 / 86.096 | Strict |
TkA01G030790 | LXL04_005644 | JCVI_TKOH_00003 | 99.7 | 100.0 / 59.167 | Review |