同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00284
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 82
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00284

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00284 Chr06 94949102-102587011 Chr05 19095025-28363586 mixed High 82 anchors
Chr06 94949102-102587011 Chr05 19095025-28363586 JCVI_TKOH_00284 · 82 gene pairs TkA06G383810 | LXL04_023239 | 81.9% | multi_source_to_OH1004 | Complex TkA06G384120 | LXL04_023236 | 97.1% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G385020 | LXL04_023232 | 93.2% | multi_source_to_OH1004 | Complex TkA06G385670 | LXL04_023230 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G386730 | LXL04_023227 | 98.6% | RBH_high_identity_coverage_synteny | Strict TkA06G387660 | LXL04_023226 | 98.8% | RBH_high_identity_coverage_synteny | Strict TkA06G388210 | LXL04_023225 | 99.0% | multi_source_to_OH1004 | Complex TkA06G388490 | LXL04_023182 | 82.0% | non_reciprocal_best_hit | Complex TkA06G388850 | LXL04_023225 | 96.4% | multi_source_to_OH1004 | Complex TkA06G389070 | LXL04_023189 | 98.4% | RBH_high_identity_coverage_synteny | Strict TkA06G389200 | LXL04_023218 | 93.4% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA06G389210 | LXL04_023186 | 95.5% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00284 Chr06:94949102-102587011 Chr05:19095025-28363586 mixed 82 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 82 · 当前范围 1–82 · 页码 1/1

TkA06G383810 → LXL04_023239
81.9%
TkA06G384120 → LXL04_023236
97.1%
TkA06G385020 → LXL04_023232
93.2%
TkA06G385670 → LXL04_023230
100.0%
TkA06G386730 → LXL04_023227
98.6%
TkA06G387660 → LXL04_023226
98.8%
TkA06G388210 → LXL04_023225
99.0%
TkA06G388490 → LXL04_023182
82.0%
TkA06G388850 → LXL04_023225
96.4%
TkA06G389070 → LXL04_023189
98.4%
TkA06G389200 → LXL04_023218
93.4%
TkA06G389210 → LXL04_023186
95.5%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA06G383810LXL04_023239JCVI_TKOH_0028481.9100.0 / 100.0Complex
TkA06G384120LXL04_023236JCVI_TKOH_0028497.129.167 / 33.333待复核
TkA06G385020LXL04_023232JCVI_TKOH_0028493.2100.0 / 100.0Complex
TkA06G385670LXL04_023230JCVI_TKOH_00284100.067.647 / 98.571待复核
TkA06G386730LXL04_023227JCVI_TKOH_0028498.6100.0 / 100.0Strict
TkA06G387660LXL04_023226JCVI_TKOH_0028498.8100.0 / 100.0Strict
TkA06G388210LXL04_023225JCVI_TKOH_0028499.0100.0 / 83.936Complex
TkA06G388490LXL04_023182JCVI_TKOH_0028482.073.822 / 50.312Complex
TkA06G388850LXL04_023225JCVI_TKOH_0028496.458.451 / 67.47Complex
TkA06G389070LXL04_023189JCVI_TKOH_0028498.4100.0 / 92.537Strict
TkA06G389200LXL04_023218JCVI_TKOH_0028493.499.61 / 99.687待复核
TkA06G389210LXL04_023186JCVI_TKOH_0028495.598.113 / 99.363待复核
TkA06G389660LXL04_023214JCVI_TKOH_0028495.794.0 / 91.558Strict
TkA06G390010LXL04_023174JCVI_TKOH_0028488.499.687 / 99.609Complex
TkA06G390040LXL04_023171JCVI_TKOH_0028496.099.715 / 100.0Strict
TkA06G390560LXL04_023169JCVI_TKOH_0028490.598.998 / 53.804待复核
TkA06G390860LXL04_023168JCVI_TKOH_00284100.091.729 / 100.0Strict
TkA06G391020LXL04_023165JCVI_TKOH_0028498.997.479 / 95.789Strict
TkA06G391040LXL04_023164JCVI_TKOH_00284100.0100.0 / 100.0Strict
TkA06G391350LXL04_023156JCVI_TKOH_00284100.098.653 / 81.389Complex
TkA06G391950LXL04_023154JCVI_TKOH_0028498.7100.0 / 100.0待复核
TkA06G392090LXL04_023153JCVI_TKOH_0028497.397.556 / 74.282Probable
TkA06G392210LXL04_023152JCVI_TKOH_0028496.0100.0 / 96.684Strict
TkA06G392220LXL04_023151JCVI_TKOH_0028499.492.222 / 100.0Strict
TkA06G392740LXL04_023148JCVI_TKOH_0028499.7100.0 / 100.0Complex
TkA06G392750LXL04_023147JCVI_TKOH_00284100.0100.0 / 100.0Strict
TkA06G392770LXL04_023145JCVI_TKOH_0028492.695.785 / 89.195待复核
TkA06G393100LXL04_023144JCVI_TKOH_0028487.499.375 / 85.637待复核
TkA06G393360LXL04_023142JCVI_TKOH_00284100.0100.0 / 72.103Probable
TkA06G393660LXL04_023141JCVI_TKOH_0028499.2100.0 / 100.0Strict
TkA06G394690LXL04_023138JCVI_TKOH_00284100.0100.0 / 100.0Strict
TkA06G394880LXL04_023136JCVI_TKOH_0028498.6100.0 / 100.0待复核
TkA06G395130LXL04_023135JCVI_TKOH_0028498.4100.0 / 100.0Complex
TkA06G395140LXL04_023133JCVI_TKOH_0028490.8100.0 / 100.0Complex
TkA06G395300LXL04_023135JCVI_TKOH_0028497.092.009 / 53.457待复核
TkA06G395310LXL04_023133JCVI_TKOH_0028477.078.09 / 28.516Complex
TkA06G395550LXL04_023131JCVI_TKOH_0028497.469.863 / 27.971Complex
TkA06G395670LXL04_023130JCVI_TKOH_0028495.599.624 / 99.624Strict
TkA06G395830LXL04_023129JCVI_TKOH_0028498.475.494 / 77.959Probable
TkA06G395840LXL04_023128JCVI_TKOH_0028499.799.453 / 90.412Complex
TkA06G395960LXL04_023126JCVI_TKOH_0028496.2100.0 / 100.0Strict
TkA06G396800LXL04_023124JCVI_TKOH_0028497.599.252 / 99.5Strict
TkA06G396810LXL04_023123JCVI_TKOH_0028498.2100.0 / 100.0Strict
TkA06G398860LXL04_023120JCVI_TKOH_0028499.6100.0 / 100.0Strict
TkA06G398870LXL04_023119JCVI_TKOH_0028491.9100.0 / 100.0Probable
TkA06G398890LXL04_023116JCVI_TKOH_0028497.6100.0 / 51.077待复核
TkA06G400570LXL04_023078JCVI_TKOH_0028462.297.995 / 34.612Complex
TkA06G401610LXL04_023111JCVI_TKOH_00284100.015.132 / 11.616Complex
TkA06G401790LXL04_023110JCVI_TKOH_0028490.094.336 / 88.244Probable
TkA06G401800LXL04_023107JCVI_TKOH_0028484.299.02 / 89.583待复核
TkA06G401810LXL04_023105JCVI_TKOH_0028499.8100.0 / 100.0Complex
TkA06G401880LXL04_023104JCVI_TKOH_0028499.299.354 / 63.731待复核
TkA06G402800LXL04_023098JCVI_TKOH_0028490.6100.0 / 100.0Probable
TkA06G402940LXL04_023097JCVI_TKOH_00284100.0100.0 / 100.0Strict
TkA06G403270LXL04_023095JCVI_TKOH_0028498.0100.0 / 100.0Strict
TkA06G403590LXL04_023091JCVI_TKOH_0028499.7100.0 / 100.0Complex
TkA06G403840LXL04_023090JCVI_TKOH_0028497.288.344 / 100.0待复核
TkA06G404000LXL04_023088JCVI_TKOH_0028482.2100.0 / 77.939Complex
TkA06G404360LXL04_023084JCVI_TKOH_00284100.075.172 / 57.672Complex
TkA06G404420LXL04_023082JCVI_TKOH_00284100.097.976 / 18.127待复核
TkA06G404440LXL04_023081JCVI_TKOH_0028499.787.367 / 53.328待复核
TkA06G404620LXL04_023080JCVI_TKOH_0028493.3100.0 / 100.0Probable
TkA06G404690LXL04_023078JCVI_TKOH_0028463.098.545 / 62.803Complex
TkA06G405100LXL04_023077JCVI_TKOH_0028499.1100.0 / 100.0Strict
TkA06G405540LXL04_023075JCVI_TKOH_0028496.9100.0 / 46.265待复核
TkA06G405640LXL04_023075JCVI_TKOH_0028498.7100.0 / 53.735待复核
TkA06G406190LXL04_023072JCVI_TKOH_0028497.599.648 / 81.556Strict
TkA06G406350LXL04_023075JCVI_TKOH_0028486.199.532 / 99.518Complex
TkA06G406850LXL04_023061JCVI_TKOH_0028489.392.188 / 60.41Complex
TkA06G407300LXL04_023059JCVI_TKOH_00284100.0100.0 / 86.557Strict
TkA06G407870LXL04_023056JCVI_TKOH_0028499.391.195 / 100.0Complex
TkA06G409120LXL04_023055JCVI_TKOH_0028498.0100.0 / 100.0Strict
TkA06G409510LXL04_023046JCVI_TKOH_0028498.5100.0 / 96.243Complex
TkA06G410640LXL04_023043JCVI_TKOH_0028499.694.513 / 100.0待复核
TkA06G411340LXL04_023042JCVI_TKOH_0028499.0100.0 / 94.569Complex
TkA06G411740LXL04_023037JCVI_TKOH_0028478.096.714 / 81.877待复核
TkA06G411930LXL04_023036JCVI_TKOH_00284100.099.744 / 80.206Strict
TkA06G413320LXL04_023029JCVI_TKOH_0028497.785.437 / 98.876Complex
TkA06G413920LXL04_023023JCVI_TKOH_0028498.297.482 / 99.267Strict
TkA06G413950LXL04_023022JCVI_TKOH_0028482.4100.0 / 100.0Complex
TkA06G414290LXL04_023021JCVI_TKOH_0028479.7100.0 / 100.0Complex
TkA06G414560LXL04_023020JCVI_TKOH_0028498.197.942 / 100.0Strict