同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00127
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 67
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00127

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00127 Chr03 20268159-26349198 Chr02 27386627-32931504 mixed High 67 anchors
Chr03 20268159-26349198 Chr02 27386627-32931504 JCVI_TKOH_00127 · 67 gene pairs TkA03G079590 | LXL04_006841 | 98.9% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA03G080100 | LXL04_006847 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA03G080370 | LXL04_006848 | 92.9% | RBH_sequence_supported | Probable TkA03G080700 | LXL04_006849 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G081100 | LXL04_006850 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA03G081220 | LXL04_006852 | 98.6% | sequence_supported_annotation_or_model_conflict | Review TkA03G081240 | LXL04_006853 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA03G081360 | LXL04_006855 | 100.0% | sequence_supported_annotation_or_model_conflict | Review TkA03G081500 | LXL04_006856 | 99.6% | RBH_high_identity_coverage_synteny | Strict TkA03G081780 | LXL04_006861 | 94.3% | multi_source_to_OH1004 | Complex TkA03G082870 | LXL04_006862 | 99.2% | RBH_high_identity_coverage_synteny | Strict TkA03G082880 | LXL04_006863 | 94.5% | RBH_sequence_supported | Probable
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00127 Chr03:20268159-26349198 Chr02:27386627-32931504 mixed 67 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 67 · 当前范围 1–67 · 页码 1/1

TkA03G079590 → LXL04_006841
98.9%
TkA03G080100 → LXL04_006847
99.6%
TkA03G080370 → LXL04_006848
92.9%
TkA03G080700 → LXL04_006849
100.0%
TkA03G081100 → LXL04_006850
100.0%
TkA03G081220 → LXL04_006852
98.6%
TkA03G081240 → LXL04_006853
99.6%
TkA03G081360 → LXL04_006855
100.0%
TkA03G081500 → LXL04_006856
99.6%
TkA03G081780 → LXL04_006861
94.3%
TkA03G082870 → LXL04_006862
99.2%
TkA03G082880 → LXL04_006863
94.5%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA03G079590LXL04_006841JCVI_TKOH_0012798.971.429 / 68.702待复核
TkA03G080100LXL04_006847JCVI_TKOH_0012799.696.575 / 98.947Strict
TkA03G080370LXL04_006848JCVI_TKOH_0012792.9100.0 / 70.149Probable
TkA03G080700LXL04_006849JCVI_TKOH_00127100.0100.0 / 100.0Strict
TkA03G081100LXL04_006850JCVI_TKOH_00127100.0100.0 / 100.0Strict
TkA03G081220LXL04_006852JCVI_TKOH_0012798.690.476 / 53.571待复核
TkA03G081240LXL04_006853JCVI_TKOH_0012799.699.217 / 100.0Strict
TkA03G081360LXL04_006855JCVI_TKOH_00127100.097.861 / 32.049待复核
TkA03G081500LXL04_006856JCVI_TKOH_0012799.6100.0 / 100.0Strict
TkA03G081780LXL04_006861JCVI_TKOH_0012794.393.805 / 91.379Complex
TkA03G082870LXL04_006862JCVI_TKOH_0012799.2100.0 / 100.0Strict
TkA03G082880LXL04_006863JCVI_TKOH_0012794.5100.0 / 100.0Probable
TkA03G083130LXL04_006865JCVI_TKOH_0012799.8100.0 / 100.0Complex
TkA03G084160LXL04_006868JCVI_TKOH_0012798.8100.0 / 100.0Strict
TkA03G084500LXL04_006869JCVI_TKOH_00127100.0100.0 / 100.0Strict
TkA03G084520LXL04_006870JCVI_TKOH_0012798.1100.0 / 76.866Probable
TkA03G085180LXL04_006874JCVI_TKOH_0012792.094.424 / 100.0Probable
TkA03G085200LXL04_006876JCVI_TKOH_0012788.150.467 / 22.264Complex
TkA03G085220LXL04_006877JCVI_TKOH_0012788.3100.0 / 100.0待复核
TkA03G085360LXL04_006885JCVI_TKOH_0012768.792.654 / 33.958Complex
TkA03G085590LXL04_006897JCVI_TKOH_0012778.699.029 / 13.446Complex
TkA03G085630LXL04_006883JCVI_TKOH_0012792.598.529 / 50.912Complex
TkA03G085730LXL04_006885JCVI_TKOH_0012766.175.703 / 33.306Complex
TkA03G085900LXL04_006885JCVI_TKOH_0012799.798.168 / 52.362待复核
TkA03G085910LXL04_006886JCVI_TKOH_0012799.599.848 / 57.568待复核
TkA03G085920LXL04_006886JCVI_TKOH_0012799.894.655 / 37.183待复核
TkA03G085970LXL04_006897JCVI_TKOH_0012794.996.875 / 20.627Complex
TkA03G085980LXL04_006887JCVI_TKOH_0012799.5100.0 / 100.0Complex
TkA03G086090LXL04_006904JCVI_TKOH_0012789.595.915 / 37.283Complex
TkA03G086460LXL04_006904JCVI_TKOH_0012790.099.054 / 48.786待复核
TkA03G086890LXL04_006904JCVI_TKOH_0012783.6100.0 / 24.335Complex
TkA03G087180LXL04_006904JCVI_TKOH_0012786.396.296 / 13.121Complex
TkA03G087280LXL04_006904JCVI_TKOH_0012785.399.8 / 29.48Complex
TkA03G087300LXL04_006885JCVI_TKOH_0012775.595.507 / 52.28Complex
TkA03G087310LXL04_006910JCVI_TKOH_0012799.798.148 / 61.12Complex
TkA03G088620LXL04_006913JCVI_TKOH_0012793.4100.0 / 100.0Probable
TkA03G088650LXL04_006914JCVI_TKOH_0012799.6100.0 / 92.691Complex
TkA03G088680LXL04_006916JCVI_TKOH_00127100.0100.0 / 76.0Probable
TkA03G088840LXL04_006914JCVI_TKOH_0012768.569.69 / 97.01Complex
TkA03G088850LXL04_006919JCVI_TKOH_0012789.3100.0 / 100.0待复核
TkA03G089460LXL04_006922JCVI_TKOH_0012786.998.28 / 82.392待复核
TkA03G089480LXL04_006923JCVI_TKOH_0012799.6100.0 / 100.0Strict
TkA03G089650LXL04_006926JCVI_TKOH_0012799.3100.0 / 69.626Complex
TkA03G090040LXL04_006930JCVI_TKOH_00127100.0100.0 / 100.0Strict
TkA03G090680LXL04_006931JCVI_TKOH_00127100.0100.0 / 23.459待复核
TkA03G090690LXL04_006932JCVI_TKOH_0012798.7100.0 / 86.364Strict
TkA03G090830LXL04_006933JCVI_TKOH_0012799.599.693 / 91.926Strict
TkA03G093990LXL04_006944JCVI_TKOH_0012796.469.543 / 33.496Complex
TkA03G094330LXL04_006944JCVI_TKOH_0012797.471.698 / 37.164Complex
TkA03G094840LXL04_006947JCVI_TKOH_0012799.1100.0 / 100.0Strict
TkA03G096600LXL04_006967JCVI_TKOH_0012798.238.356 / 76.712待复核
TkA03G096910LXL04_006961JCVI_TKOH_0012775.626.174 / 77.551Complex
TkA03G096920LXL04_006961JCVI_TKOH_0012775.626.174 / 77.551Complex
TkA03G097050LXL04_006968JCVI_TKOH_0012794.7100.0 / 89.27Probable
TkA03G097110LXL04_006971JCVI_TKOH_00127100.0100.0 / 89.506待复核
TkA03G100930LXL04_006950JCVI_TKOH_0012799.7100.0 / 100.0Strict
TkA03G100960LXL04_006951JCVI_TKOH_0012796.7100.0 / 98.587Strict
TkA03G100970LXL04_006952JCVI_TKOH_0012785.895.07 / 64.958待复核
TkA03G100980LXL04_006954JCVI_TKOH_0012792.899.491 / 99.486Probable
TkA03G101350LXL04_006956JCVI_TKOH_0012795.3100.0 / 100.0Strict
TkA03G101380LXL04_006958JCVI_TKOH_0012799.791.761 / 62.476待复核
TkA03G101640LXL04_006972JCVI_TKOH_0012794.394.224 / 89.691Complex
TkA03G101700LXL04_006985JCVI_TKOH_0012789.0100.0 / 100.0Complex
TkA03G101810LXL04_006976JCVI_TKOH_0012771.994.652 / 100.0Complex
TkA03G102660LXL04_006979JCVI_TKOH_0012791.276.817 / 98.886Probable
TkA03G102940LXL04_006985JCVI_TKOH_0012794.7100.0 / 79.878Complex
TkA03G103140LXL04_006988JCVI_TKOH_00127100.0100.0 / 100.0Complex