同源/共线性证据

跨参考基因组查看同源关系与共线性区块证据。

证据边界:TK1151 和 OH-1004 是同一物种的不同材料,本页展示两个参考基因组之间的同源与共线性 ID 对照,不是同一品种/同一基因组版本升级。区块来自 DIAMOND RBH 与坐标顺序锚点,后续仍可用 MCScanX/JCVI 继续复核。也支持直接输入 JCVI_TKOH_ 开头的区块 ID。

全局区块概览

共线性区块
427
ID 对照记录
84884
高置信区块
302
中置信区块
125
参考材料组装基因数gap 数端粒扫描
TK1151 TK1151_GWHBCHF00000000 45224 1917 0/9
OH-1004 OH1004_GCA_047496595.1 40057 131 0/711

查询解析

输入 ID
JCVI_TKOH_00029
解析类型
区块 ID
ID 对照 + 共线性联合证据
解析到的基因
无
未能直接匹配到橡胶草基因目录
关联结果
0 / 1 / 68
对照 / 区块 / 锚点
最佳区块: JCVI_TKOH_00029

当前输入已解析为共线性区块 ID,下面优先展示区块范围和锚点基因。

线性共线性图

当前查询的最佳共线性区块以线性 ribbon 形式展示。

JCVI_TKOH_00029 Chr01 106311449-110128721 Chr01 51730200-55805557 mixed High 68 anchors
Chr01 106311449-110128721 Chr01 51730200-55805557 JCVI_TKOH_00029 · 68 gene pairs TkA01G425900 | LXL04_002715 | 100.0% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G425990 | LXL04_002713 | 99.5% | RBH_below_probable_coverage_or_synteny_threshold | Review TkA01G426000 | LXL04_002712 | 97.5% | sequence_supported_annotation_or_model_conflict | Review TkA01G426130 | LXL04_002711 | 99.2% | RBH_high_identity_coverage_synteny | Strict TkA01G426500 | LXL04_002708 | 99.4% | RBH_high_identity_coverage_synteny | Strict TkA01G426890 | LXL04_002707 | 99.9% | multi_source_to_OH1004 | Complex TkA01G426900 | LXL04_002707 | 98.2% | sequence_supported_annotation_or_model_conflict | Review TkA01G426910 | LXL04_002706 | 99.3% | sequence_supported_annotation_or_model_conflict | Review TkA01G426950 | LXL04_002704 | 100.0% | RBH_high_identity_coverage_synteny | Strict TkA01G427210 | LXL04_002697 | 77.0% | non_reciprocal_best_hit | Complex TkA01G427430 | LXL04_002701 | 87.6% | multi_source_to_OH1004 | Complex TkA01G427920 | LXL04_002702 | 59.2% | RBH_below_probable_coverage_or_synteny_threshold | Review
High Medium Other 仅绘制前 12 条锚点
锚点表按页展示,TSV 下载包含当前查询的全部锚点;上方 ribbon 仅展示当前区块的部分线性共线性骨架。

当前查询证据

当前查询没有可展示的 ID 对照记录。

共线性证据

区块查询位置目标位置方向当前映射锚点数置信等级备注
JCVI_TKOH_00029 Chr01:106311449-110128721 Chr01:51730200-55805557 mixed 68 高置信 Formal JCVI synteny block from rebuilt ID map pipeline.

区块锚点基因

锚点总数: 68 · 当前范围 1–68 · 页码 1/1

TkA01G425900 → LXL04_002715
100.0%
TkA01G425990 → LXL04_002713
99.5%
TkA01G426000 → LXL04_002712
97.5%
TkA01G426130 → LXL04_002711
99.2%
TkA01G426500 → LXL04_002708
99.4%
TkA01G426890 → LXL04_002707
99.9%
TkA01G426900 → LXL04_002707
98.2%
TkA01G426910 → LXL04_002706
99.3%
TkA01G426950 → LXL04_002704
100.0%
TkA01G427210 → LXL04_002697
77.0%
TkA01G427430 → LXL04_002701
87.6%
TkA01G427920 → LXL04_002702
59.2%
TK1151 基因OH-1004 基因区块一致性覆盖度置信等级
TkA01G425900LXL04_002715JCVI_TKOH_00029100.046.418 / 68.354待复核
TkA01G425990LXL04_002713JCVI_TKOH_0002999.581.781 / 24.862待复核
TkA01G426000LXL04_002712JCVI_TKOH_0002997.597.024 / 100.0待复核
TkA01G426130LXL04_002711JCVI_TKOH_0002999.2100.0 / 100.0Strict
TkA01G426500LXL04_002708JCVI_TKOH_0002999.4100.0 / 95.882Strict
TkA01G426890LXL04_002707JCVI_TKOH_0002999.9100.0 / 64.097Complex
TkA01G426900LXL04_002707JCVI_TKOH_0002998.2100.0 / 31.007待复核
TkA01G426910LXL04_002706JCVI_TKOH_0002999.398.675 / 34.057待复核
TkA01G426950LXL04_002704JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G427210LXL04_002697JCVI_TKOH_0002977.048.413 / 54.222Complex
TkA01G427430LXL04_002701JCVI_TKOH_0002987.676.033 / 83.983Complex
TkA01G427920LXL04_002702JCVI_TKOH_0002959.235.669 / 25.939待复核
TkA01G427930LXL04_002695JCVI_TKOH_0002999.294.872 / 92.25Strict
TkA01G428300LXL04_002694JCVI_TKOH_0002998.897.287 / 100.0Strict
TkA01G428310LXL04_002693JCVI_TKOH_00029100.084.167 / 31.962待复核
TkA01G428560LXL04_002690JCVI_TKOH_00029100.090.385 / 50.811待复核
TkA01G428820LXL04_002689JCVI_TKOH_0002996.257.353 / 82.105Complex
TkA01G430210LXL04_002684JCVI_TKOH_0002998.6100.0 / 100.0Strict
TkA01G430310LXL04_002682JCVI_TKOH_0002999.8100.0 / 100.0Complex
TkA01G430540LXL04_002680JCVI_TKOH_0002998.2100.0 / 100.0Complex
TkA01G430560LXL04_002679JCVI_TKOH_0002999.7100.0 / 96.21Complex
TkA01G430570LXL04_002678JCVI_TKOH_0002999.399.738 / 100.0Strict
TkA01G430880LXL04_002676JCVI_TKOH_0002998.6100.0 / 100.0Strict
TkA01G430900LXL04_002675JCVI_TKOH_0002999.190.625 / 100.0Complex
TkA01G431020LXL04_002674JCVI_TKOH_00029100.0100.0 / 99.01Strict
TkA01G431120LXL04_002672JCVI_TKOH_00029100.0100.0 / 100.0Complex
TkA01G431210LXL04_002667JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G431420LXL04_002665JCVI_TKOH_0002997.0100.0 / 100.0Strict
TkA01G432310LXL04_002659JCVI_TKOH_0002997.8100.0 / 100.0Strict
TkA01G432320LXL04_002658JCVI_TKOH_00029100.0100.0 / 100.0Complex
TkA01G432590LXL04_002653JCVI_TKOH_00029100.097.531 / 50.0待复核
TkA01G432930LXL04_002651JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G433580LXL04_002644JCVI_TKOH_00029100.098.684 / 71.023Complex
TkA01G433710LXL04_002643JCVI_TKOH_0002999.9100.0 / 100.0Strict
TkA01G433720LXL04_002642JCVI_TKOH_0002999.0100.0 / 100.0Strict
TkA01G433770LXL04_002641JCVI_TKOH_00029100.0100.0 / 100.0待复核
TkA01G433780LXL04_002640JCVI_TKOH_0002998.787.5 / 48.276待复核
TkA01G433800LXL04_002639JCVI_TKOH_0002997.7100.0 / 100.0Strict
TkA01G434380LXL04_002637JCVI_TKOH_0002982.389.904 / 41.253Complex
TkA01G434700LXL04_002634JCVI_TKOH_0002999.3100.0 / 79.57Complex
TkA01G434780LXL04_002629JCVI_TKOH_0002971.3100.0 / 75.653Complex
TkA01G435210LXL04_002626JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G435360LXL04_002623JCVI_TKOH_0002997.8100.0 / 89.255Strict
TkA01G435390LXL04_002619JCVI_TKOH_0002998.386.861 / 55.607待复核
TkA01G435660LXL04_002615JCVI_TKOH_0002997.1100.0 / 70.433Probable
TkA01G435980LXL04_002611JCVI_TKOH_00029100.085.455 / 10.387待复核
TkA01G435990LXL04_002611JCVI_TKOH_0002984.6100.0 / 26.519待复核
TkA01G436420LXL04_002606JCVI_TKOH_0002999.5100.0 / 100.0Strict
TkA01G436440LXL04_002605JCVI_TKOH_0002998.7100.0 / 100.0Strict
TkA01G436450LXL04_002604JCVI_TKOH_0002999.998.623 / 88.835Complex
TkA01G436810LXL04_002602JCVI_TKOH_0002994.4100.0 / 100.0Probable
TkA01G436850LXL04_002601JCVI_TKOH_0002994.672.577 / 84.065Probable
TkA01G436870LXL04_002600JCVI_TKOH_00029100.0100.0 / 98.242Strict
TkA01G437580LXL04_002594JCVI_TKOH_00029100.080.556 / 100.0Strict
TkA01G437680LXL04_002592JCVI_TKOH_0002997.0100.0 / 100.0Strict
TkA01G437690LXL04_002591JCVI_TKOH_0002999.2100.0 / 100.0Strict
TkA01G437720LXL04_002590JCVI_TKOH_0002998.641.618 / 64.865待复核
TkA01G437740LXL04_002589JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G437750LXL04_002588JCVI_TKOH_00029100.099.598 / 92.884Strict
TkA01G437820LXL04_002587JCVI_TKOH_0002995.2100.0 / 100.0Strict
TkA01G437910LXL04_002585JCVI_TKOH_0002996.3100.0 / 100.0Strict
TkA01G437920LXL04_002584JCVI_TKOH_0002998.5100.0 / 100.0Complex
TkA01G438060LXL04_002582JCVI_TKOH_0002999.599.0 / 75.379Probable
TkA01G438140LXL04_002580JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G439810LXL04_002574JCVI_TKOH_0002998.375.705 / 45.982Complex
TkA01G440000LXL04_002572JCVI_TKOH_00029100.0100.0 / 100.0Strict
TkA01G440010LXL04_002571JCVI_TKOH_0002999.899.38 / 50.472待复核
TkA01G440580LXL04_002565JCVI_TKOH_0002999.897.779 / 97.779Strict