Orthology / Synteny Evidence

Inspect cross-reference orthology and synteny-block evidence.

TkA01G624900 LXL04_000258 JCVI_TKOH_00001 Gene ID Converter

Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.

Global Block Summary

Synteny blocks

427

ID converter records

84884

High confidence

302

Medium confidence

125

Material	Assembly	Genes	Gap runs	Telomere scan
TK1151	`TK1151_GWHBCHF00000000`	45224	1917	0/9
OH-1004	`OH1004_GCA_047496595.1`	40057	131	0/711

Query Interpretation

Input ID

JCVI_TKOH_00276

Query type

Block ID

Crosswalk plus synteny evidence

Resolved gene

None

No rubber dandelion gene was resolved

Linked evidence

0 / 1 / 112

crosswalk / blocks / anchors

Best block: JCVI_TKOH_00276

The query resolves to a synteny-block ID. Block span and anchor genes are shown first.

Gene ID Converter Download current result

Linear Synteny View

The best synteny block for the current query is shown as a linear ribbon.

JCVI_TKOH_00276 Chr06 50879767-63163441 Chr05 61862238-73915934 mixed High 112 anchors

High Medium Other Only the first 12 anchors are drawn

The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.

Current Query Evidence

No ID correspondence record is available for the current query.

Synteny Evidence

Block	Query location	Target location	Orientation	Current mapped anchors	Confidence	Note
`JCVI_TKOH_00276`	Chr06:50879767-63163441	Chr05:61862238-73915934	mixed	112	High	Formal JCVI synteny block from rebuilt ID map pipeline.

Block Anchor Genes

Total anchors: 112 · Showing 1–112 · Page 1/1

Download All Anchors TSV

TkA06G195330 → LXL04_023903

100.0%

TkA06G195420 → LXL04_023913

91.6%

TkA06G195430 → LXL04_023912

98.7%

TkA06G196710 → LXL04_023910

98.9%

TkA06G196720 → LXL04_023909

94.8%

TkA06G196780 → LXL04_023908

99.7%

TkA06G197200 → LXL04_023906

100.0%

TkA06G197310 → LXL04_023905

94.8%

TkA06G197450 → LXL04_023905

75.0%

TkA06G197620 → LXL04_023903

98.1%

TkA06G199160 → LXL04_023900

100.0%

TkA06G199310 → LXL04_023895

100.0%

TK1151 gene	OH-1004 gene	Block	Identity	Coverage	Confidence
`TkA06G195330`	`LXL04_023903`	`JCVI_TKOH_00276`	100.0	100.0 / 80.597	Review
`TkA06G195420`	`LXL04_023913`	`JCVI_TKOH_00276`	91.6	94.059 / 59.006	Review
`TkA06G195430`	`LXL04_023912`	`JCVI_TKOH_00276`	98.7	100.0 / 41.737	Review
`TkA06G196710`	`LXL04_023910`	`JCVI_TKOH_00276`	98.9	98.652 / 94.819	Review
`TkA06G196720`	`LXL04_023909`	`JCVI_TKOH_00276`	94.8	100.0 / 100.0	Probable
`TkA06G196780`	`LXL04_023908`	`JCVI_TKOH_00276`	99.7	93.369 / 87.345	Strict
`TkA06G197200`	`LXL04_023906`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G197310`	`LXL04_023905`	`JCVI_TKOH_00276`	94.8	99.778 / 55.083	Complex
`TkA06G197450`	`LXL04_023905`	`JCVI_TKOH_00276`	75.0	92.086 / 47.4	Complex
`TkA06G197620`	`LXL04_023903`	`JCVI_TKOH_00276`	98.1	100.0 / 80.597	Review
`TkA06G199160`	`LXL04_023900`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G199310`	`LXL04_023895`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G199320`	`LXL04_023894`	`JCVI_TKOH_00276`	100.0	100.0 / 98.565	Review
`TkA06G199580`	`LXL04_023891`	`JCVI_TKOH_00276`	100.0	100.0 / 63.174	Review
`TkA06G199960`	`LXL04_023890`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G200540`	`LXL04_023889`	`JCVI_TKOH_00276`	99.3	100.0 / 100.0	Review
`TkA06G200660`	`LXL04_023888`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G201730`	`LXL04_023885`	`JCVI_TKOH_00276`	99.3	100.0 / 87.975	Review
`TkA06G201780`	`LXL04_023884`	`JCVI_TKOH_00276`	100.0	100.0 / 67.805	Review
`TkA06G201910`	`LXL04_023888`	`JCVI_TKOH_00276`	79.3	100.0 / 100.0	Complex
`TkA06G201970`	`LXL04_023882`	`JCVI_TKOH_00276`	89.0	100.0 / 100.0	Review
`TkA06G202000`	`LXL04_023881`	`JCVI_TKOH_00276`	98.4	100.0 / 96.252	Strict
`TkA06G202260`	`LXL04_023875`	`JCVI_TKOH_00276`	100.0	89.213 / 97.764	Strict
`TkA06G202420`	`LXL04_023874`	`JCVI_TKOH_00276`	99.6	100.0 / 100.0	Strict
`TkA06G202560`	`LXL04_023871`	`JCVI_TKOH_00276`	100.0	100.0 / 99.638	Strict
`TkA06G202970`	`LXL04_023869`	`JCVI_TKOH_00276`	97.5	100.0 / 100.0	Strict
`TkA06G203710`	`LXL04_023877`	`JCVI_TKOH_00276`	81.4	100.0 / 100.0	Complex
`TkA06G203740`	`LXL04_023879`	`JCVI_TKOH_00276`	82.8	94.545 / 98.701	Review
`TkA06G205360`	`LXL04_023862`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G205400`	`LXL04_023861`	`JCVI_TKOH_00276`	100.0	100.0 / 92.857	Complex
`TkA06G206090`	`LXL04_023858`	`JCVI_TKOH_00276`	99.1	100.0 / 100.0	Strict
`TkA06G206230`	`LXL04_023857`	`JCVI_TKOH_00276`	80.7	79.135 / 30.027	Complex
`TkA06G206500`	`LXL04_023853`	`JCVI_TKOH_00276`	97.9	100.0 / 100.0	Strict
`TkA06G207200`	`LXL04_023851`	`JCVI_TKOH_00276`	99.8	100.0 / 52.832	Review
`TkA06G208160`	`LXL04_023848`	`JCVI_TKOH_00276`	99.3	100.0 / 99.656	Strict
`TkA06G208200`	`LXL04_023846`	`JCVI_TKOH_00276`	76.2	97.634 / 78.647	Review
`TkA06G209700`	`LXL04_023837`	`JCVI_TKOH_00276`	93.4	100.0 / 57.238	Complex
`TkA06G209720`	`LXL04_023836`	`JCVI_TKOH_00276`	76.2	100.0 / 100.0	Review
`TkA06G210030`	`LXL04_023835`	`JCVI_TKOH_00276`	100.0	100.0 / 67.63	Review
`TkA06G210050`	`LXL04_023834`	`JCVI_TKOH_00276`	98.5	85.714 / 30.769	Review
`TkA06G210700`	`LXL04_023831`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G210740`	`LXL04_023830`	`JCVI_TKOH_00276`	100.0	89.216 / 52.601	Review
`TkA06G210820`	`LXL04_023828`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G210970`	`LXL04_023827`	`JCVI_TKOH_00276`	88.4	100.0 / 94.529	Complex
`TkA06G210980`	`LXL04_023826`	`JCVI_TKOH_00276`	98.8	100.0 / 100.0	Review
`TkA06G211650`	`LXL04_023824`	`JCVI_TKOH_00276`	97.8	100.0 / 100.0	Complex
`TkA06G212860`	`LXL04_023829`	`JCVI_TKOH_00276`	98.9	100.0 / 100.0	Review
`TkA06G212870`	`LXL04_023828`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G212940`	`LXL04_023827`	`JCVI_TKOH_00276`	99.4	100.0 / 100.0	Complex
`TkA06G212950`	`LXL04_023826`	`JCVI_TKOH_00276`	99.4	100.0 / 100.0	Review
`TkA06G213130`	`LXL04_023825`	`JCVI_TKOH_00276`	97.2	100.0 / 40.226	Review
`TkA06G213330`	`LXL04_023824`	`JCVI_TKOH_00276`	99.4	100.0 / 100.0	Complex
`TkA06G214350`	`LXL04_023824`	`JCVI_TKOH_00276`	61.5	87.248 / 40.373	Complex
`TkA06G214370`	`LXL04_023820`	`JCVI_TKOH_00276`	98.4	100.0 / 100.0	Review
`TkA06G214610`	`LXL04_023824`	`JCVI_TKOH_00276`	60.7	99.465 / 59.317	Complex
`TkA06G214630`	`LXL04_023819`	`JCVI_TKOH_00276`	96.0	100.0 / 100.0	Review
`TkA06G214660`	`LXL04_023818`	`JCVI_TKOH_00276`	99.7	100.0 / 100.0	Strict
`TkA06G215510`	`LXL04_023809`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Review
`TkA06G217830`	`LXL04_023805`	`JCVI_TKOH_00276`	97.4	91.469 / 99.485	Strict
`TkA06G218060`	`LXL04_023833`	`JCVI_TKOH_00276`	96.4	100.0 / 100.0	Strict
`TkA06G218070`	`LXL04_023794`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G218640`	`LXL04_023790`	`JCVI_TKOH_00276`	93.0	100.0 / 100.0	Probable
`TkA06G218830`	`LXL04_023787`	`JCVI_TKOH_00276`	99.6	100.0 / 100.0	Strict
`TkA06G219410`	`LXL04_023785`	`JCVI_TKOH_00276`	97.4	53.521 / 60.317	Review
`TkA06G221120`	`LXL04_023774`	`JCVI_TKOH_00276`	89.4	99.461 / 83.745	Review
`TkA06G221140`	`LXL04_023773`	`JCVI_TKOH_00276`	93.9	100.0 / 99.524	Probable
`TkA06G221510`	`LXL04_023772`	`JCVI_TKOH_00276`	95.5	100.0 / 100.0	Review
`TkA06G222770`	`LXL04_023759`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G224330`	`LXL04_023755`	`JCVI_TKOH_00276`	83.7	100.0 / 87.859	Review
`TkA06G224430`	`LXL04_023754`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G224910`	`LXL04_023754`	`JCVI_TKOH_00276`	86.6	20.11 / 42.563	Complex
`TkA06G225110`	`LXL04_023753`	`JCVI_TKOH_00276`	99.4	99.529 / 97.542	Strict
`TkA06G228220`	`LXL04_023738`	`JCVI_TKOH_00276`	100.0	100.0 / 87.179	Complex
`TkA06G229950`	`LXL04_023733`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G230150`	`LXL04_023731`	`JCVI_TKOH_00276`	97.0	100.0 / 100.0	Complex
`TkA06G230160`	`LXL04_023730`	`JCVI_TKOH_00276`	100.0	90.654 / 51.053	Review
`TkA06G230460`	`LXL04_023729`	`JCVI_TKOH_00276`	96.6	99.244 / 99.812	Complex
`TkA06G230470`	`LXL04_023726`	`JCVI_TKOH_00276`	99.0	74.907 / 97.816	Complex
`TkA06G230560`	`LXL04_023724`	`JCVI_TKOH_00276`	98.1	100.0 / 100.0	Complex
`TkA06G230790`	`LXL04_023723`	`JCVI_TKOH_00276`	100.0	45.625 / 39.459	Review
`TkA06G231460`	`LXL04_023721`	`JCVI_TKOH_00276`	98.1	100.0 / 100.0	Review
`TkA06G231470`	`LXL04_023714`	`JCVI_TKOH_00276`	76.0	61.6 / 78.571	Complex
`TkA06G231950`	`LXL04_023717`	`JCVI_TKOH_00276`	96.9	87.363 / 70.982	Probable
`TkA06G233060`	`LXL04_023714`	`JCVI_TKOH_00276`	99.5	100.0 / 100.0	Complex
`TkA06G233070`	`LXL04_023713`	`JCVI_TKOH_00276`	98.7	86.413 / 63.855	Review
`TkA06G233990`	`LXL04_023712`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G234030`	`LXL04_023711`	`JCVI_TKOH_00276`	99.1	88.889 / 96.089	Complex
`TkA06G234720`	`LXL04_023731`	`JCVI_TKOH_00276`	97.0	100.0 / 100.0	Complex
`TkA06G234740`	`LXL04_023730`	`JCVI_TKOH_00276`	98.5	90.654 / 51.053	Review
`TkA06G235200`	`LXL04_023729`	`JCVI_TKOH_00276`	96.4	99.244 / 99.812	Complex
`TkA06G236100`	`LXL04_023726`	`JCVI_TKOH_00276`	99.8	100.0 / 100.0	Complex
`TkA06G236400`	`LXL04_023724`	`JCVI_TKOH_00276`	98.1	96.951 / 75.714	Complex
`TkA06G237340`	`LXL04_023710`	`JCVI_TKOH_00276`	99.7	100.0 / 100.0	Complex
`TkA06G237830`	`LXL04_023708`	`JCVI_TKOH_00276`	91.5	100.0 / 100.0	Complex
`TkA06G238310`	`LXL04_023704`	`JCVI_TKOH_00276`	99.8	84.0 / 100.0	Complex
`TkA06G238320`	`LXL04_023703`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G238350`	`LXL04_023702`	`JCVI_TKOH_00276`	99.9	100.0 / 100.0	Strict
`TkA06G239910`	`LXL04_023700`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G240340`	`LXL04_023698`	`JCVI_TKOH_00276`	75.8	100.0 / 100.0	Complex
`TkA06G240390`	`LXL04_023697`	`JCVI_TKOH_00276`	99.1	100.0 / 100.0	Complex
`TkA06G240590`	`LXL04_023695`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G241090`	`LXL04_023694`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Complex
`TkA06G241410`	`LXL04_023692`	`JCVI_TKOH_00276`	98.2	97.321 / 33.436	Review
`TkA06G241500`	`LXL04_023689`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Strict
`TkA06G242010`	`LXL04_023685`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Review
`TkA06G242230`	`LXL04_023685`	`JCVI_TKOH_00276`	100.0	100.0 / 100.0	Review
`TkA06G242670`	`LXL04_023681`	`JCVI_TKOH_00276`	99.4	100.0 / 100.0	Review
`TkA06G242730`	`LXL04_023714`	`JCVI_TKOH_00276`	74.5	92.857 / 98.98	Complex
`TkA06G242770`	`LXL04_023680`	`JCVI_TKOH_00276`	100.0	77.108 / 56.388	Complex
`TkA06G243580`	`LXL04_023674`	`JCVI_TKOH_00276`	99.3	97.973 / 97.973	Review
`TkA06G246780`	`LXL04_023666`	`JCVI_TKOH_00276`	71.1	100.0 / 100.0	Complex
`TkA06G247230`	`LXL04_023664`	`JCVI_TKOH_00276`	99.6	100.0 / 85.223	Complex