Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00067
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 11
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00067The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00067 |
Chr02:99159755-99559426 | Chr02:23168492-23821201 | + | 11 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 11 · Showing 1–11 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA02G390610 | LXL04_006726 | JCVI_TKOH_00067 | 100.0 | 100.0 / 100.0 | Complex |
TkA02G391100 | LXL04_006728 | JCVI_TKOH_00067 | 95.4 | 100.0 / 100.0 | Review |
TkA02G391250 | LXL04_006731 | JCVI_TKOH_00067 | 77.8 | 97.674 / 23.633 | Complex |
TkA02G391260 | LXL04_006731 | JCVI_TKOH_00067 | 58.0 | 100.0 / 89.258 | Complex |
TkA02G391350 | LXL04_006732 | JCVI_TKOH_00067 | 92.8 | 75.63 / 98.361 | Complex |
TkA02G391460 | LXL04_006734 | JCVI_TKOH_00067 | 100.0 | 100.0 / 56.433 | Review |
TkA02G391490 | LXL04_006735 | JCVI_TKOH_00067 | 95.1 | 74.453 / 100.0 | Complex |
TkA02G391670 | LXL04_006738 | JCVI_TKOH_00067 | 91.0 | 98.039 / 25.063 | Complex |
TkA02G391720 | LXL04_006739 | JCVI_TKOH_00067 | 96.6 | 100.0 / 83.352 | Complex |
TkA02G391740 | LXL04_006740 | JCVI_TKOH_00067 | 98.0 | 100.0 / 100.0 | Complex |
TkA02G391750 | LXL04_006741 | JCVI_TKOH_00067 | 99.0 | 100.0 / 100.0 | Complex |