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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG091920
Reference: TK1151 Chr: ChrUn Coordinates: 26031951-26037167 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2545 bp · TkAUNG091920|TK1151|cDNA

GTAGCATTCATCTTCCTTCCTCTTCTTCGCACAAAACCAGTAGGGTTTATCACTGCGCATCTAAACCCCCGACACCATGGCTGGATCTCGATCGTCTACGACGCGCCTACTATATACTCTACGTTCATCCATATATCCATCATCGAGATCACCATCACCAATCACTGCTCTCCTCCATCTCCACCGTCACTACGCCGCTGCACCAGCCGTGAGAGCGAAAGATGATAAGGAGCCATGGTGGAAGGAGTCGATGGAGAAAG...

CDS

Download CDS FASTA

2250 bp · TkAUNG091920|TK1151|CDS

ATGGCTGGATCTCGATCGTCTACGACGCGCCTACTATATACTCTACGTTCATCCATATATCCATCATCGAGATCACCATCACCAATCACTGCTCTCCTCCATCTCCACCGTCACTACGCCGCTGCACCAGCCGTGAGAGCGAAAGATGATAAGGAGCCATGGTGGAAGGAGTCGATGGAGAAAGTGAGAAATATCGGAATATCAGCTCATATTGATTCGGGAAAAACAACGCTTACGGAAAGGGTTTTGTTTTACACGGG...

Protein

Download Protein FASTA

749 aa · TkAUNG091920|TK1151|PROTEIN

MAGSRSSTTRLLYTLRSSIYPSSRSPSPITALLHLHRHYAAAPAVRAKDDKEPWWKESMEKVRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGKDGVGAKMDSMELEREKGITIQSAATYCTWKDYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMKRYEVPRVAFINKLDRMGADPWKVLNQARKKLRHHSAAVQMPIGLEEDFQGLVDLVQLKAYYFHGSSGEKVVTEEIPADLQA...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG091920
TK1151 IDTkAUNG091920
OH-1004 IDLXL04_026901
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG091920
LocationChrUn:26031951-26037167 (+)
DescriptionSimilar to MEFG2: Elongation factor G-2, mitochondrial
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g45030 Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. No verified direct reference in this release
At1g45332 Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0565500 Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_026901 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0070125 mitochondrial translational elongation Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005759 mitochondrial matrix Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0003746 translation elongation factor activity Molecular Function
GO:0003924 GTPase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0005525 GTP binding Molecular Function
KEGG gene cross-reference
ath:AT1G45332
ath:AT2G45030
dosa:Os03g0565500
mxa:MXAN_2408
spo:2539776
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.900
Rank 1 · TkAUNG091920 · TK1151
Cytoplasm0.067
Rank 2 · TkAUNG091920 · TK1151
Plastid0.047
Rank 3 · TkAUNG091920 · TK1151
Nucleus0.044
Rank 4 · TkAUNG091920 · TK1151
Cell membrane0.021
Rank 5 · TkAUNG091920 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00009GTP_EFTU61-334 aa
PF16847AvrPtoB_bdg62-79 aa
PF01926MMR_HSR1109-191 aa
PF04548AIG1112-148 aa
PF22042EF-G_D2248-273 aa
PF03764EFG_IV262-310 aa
PF16847AvrPtoB_bdg291-345 aa
PF22042EF-G_D2375-443 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG091920PF00009GTP_EFTU613341e-60205.3
TkAUNG091920PF16847AvrPtoB_bdg62790.02116.0
TkAUNG091920PF01926MMR_HSR11091910.002818.5
TkAUNG091920PF04548AIG11121480.05613.5
TkAUNG091920PF22042EF-G_D22482733e-1040.8
TkAUNG091920PF03764EFG_IV2623105.7e-39133.4
TkAUNG091920PF16847AvrPtoB_bdg2913450.02116.0
TkAUNG091920PF22042EF-G_D23754433e-1040.8
TkAUNG091920PF03144GTP_EFTU_D23764422.1e-1351.2
TkAUNG091920PF14492EFG_III4555291.6e-30105.7
TkAUNG091920PF16658RF3_C4705434.9e-0730.3
TkAUNG091920PF03764EFG_IV5306505.7e-39133.4
TkAUNG091920PF00679EFG_C6547391.4e-2693.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4IW10Arabidopsis thalianasp|F4IW10|EFGM2_ARATH Elongation factor G-2, mitochondrial82.600%Swiss-ProtHigh
Q9C641Arabidopsis thalianasp|Q9C641|EFGM1_ARATH Elongation factor G-1, mitochondrial82.600%Swiss-ProtHigh
Q9FE64Oryza sativa subsp. japonicasp|Q9FE64|EFGM_ORYSJ Elongation factor G, mitochondrial79.400%Swiss-ProtHigh

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