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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG062560
Reference: TK1151 Chr: ChrUn Coordinates: 18087613-18090312 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1725 bp · TkAUNG062560|TK1151|cDNA

TAGAGGTATACGTATTGCTCAATAATTGGCTGTTTTAACATCCCGCAAGAACCTTAGCACATATCTTACACATAAACACCACAACGAACACGCAGACGCATTACACAATTCATCCCAAATTCCAGATTCACATATACATGCATCTGGCGTATACATATATATTCCACAAATACGCACTGTAAATCTGAAATGAGACGATGAAGGTATTGAAGACGGTGTCGGTTATGGATTTGGTAGCATGGAGATGGTTTGTGTCTGTT...

CDS

Download CDS FASTA

1467 bp · TkAUNG062560|TK1151|CDS

ATGAAGGTATTGAAGACGGTGTCGGTTATGGATTTGGTAGCATGGAGATGGTTTGTGTCTGTTTTCATCCTCCAGTTCGTCTTCGCTCTTCAACCACTCGTTTACTCCCTAGATGGGAACACAGGGGATGCTGTTGAATTGTTTGAGAGAGCTTCGCGTAATATGGAAATGAAACGTTATGATGATGCAATTGATGATCTTAACGCTGCAATAGAAGCTGATCCGTTACTATCTGAAGCATACTGGAGTCGAGCTTTAGT...

Protein

Download Protein FASTA

488 aa · TkAUNG062560|TK1151|PROTEIN

MKVLKTVSVMDLVAWRWFVSVFILQFVFALQPLVYSLDGNTGDAVELFERASRNMEMKRYDDAIDDLNAAIEADPLLSEAYWSRALVLRHLCRYKESEESYKKFLQMKPQNSAVEKELSQLHQAQSALDTATNLFEHSDYTKALDFIDKVVLVFSPACSQAKILKAKLLLAAKDYSGVISESGYMLKEDEDNLEALLLRGRAYYYLADHDVATRHYQKGLRLDPEHTELKKSYFGLKNLLKKTKSAEDNEKKGKLRVAVE...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG062560
TK1151 IDTkAUNG062560
OH-1004 IDLXL04_032682
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.200
Protein coverage (%)TK1151 98.361 / OH-1004 90.226
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG062560
LocationChrUn:18087613-18090312 (+)
DescriptionSimilar to P58IPK: DnaJ protein P58IPK homolog
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g03160 Plays an important positive role in viral symptom development and is required for viral multiplication and pathogenesis. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0977200 May play a role in protein folding in the endoplasmic reticulum.
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.2013 · DOI: 10.1093/jxb/ert312
Os02g0195300 May play a role in protein folding in the endoplasmic reticulum.
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.2013 · DOI: 10.1093/jxb/ert312
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032682 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006986 response to unfolded protein Biological Process
GO:0034975 protein folding in endoplasmic reticulum Biological Process
GO:0036494 positive regulation of translation initiation in response to endoplasmic reticulum stress Biological Process
GO:0044794 host-mediated activation of viral process Biological Process
GO:0070417 cellular response to cold Biological Process
GO:1903912 negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation Biological Process
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005788 endoplasmic reticulum lumen Cellular Component
GO:0005829 cytosol Cellular Component
GO:0004860 protein kinase inhibitor activity Molecular Function
GO:0019901 protein kinase binding Molecular Function
GO:0051087 protein-folding chaperone binding Molecular Function
KEGG gene cross-reference
ath:AT5G03160
bta:286770
dosa:Os01g0977200
dosa:Os02g0195300
gga:418787
osa:4327812
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.374
Rank 1 · TkAUNG062560 · TK1151
Cytoplasm0.243
Rank 2 · TkAUNG062560 · TK1151
Mitochondrion0.150
Rank 3 · TkAUNG062560 · TK1151
Nucleus0.132
Rank 4 · TkAUNG062560 · TK1151
Peroxisome0.131
Rank 5 · TkAUNG062560 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF07719TPR_234-51 aa
PF00515TPR_134-51 aa
PF13181TPR_834-51 aa
PF13424TPR_1234-56 aa
PF13176TPR_734-51 aa
PF13174TPR_635-51 aa
PF14559TPR_1938-51 aa
PF13428TPR_1438-51 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG062560PF07719TPR_234511.2e-2691.3
TkAUNG062560PF00515TPR_134511.4e-2382.4
TkAUNG062560PF13181TPR_834512.4e-1659.1
TkAUNG062560PF13424TPR_1234568.4e-0833.0
TkAUNG062560PF13176TPR_734510.0004420.8
TkAUNG062560PF13174TPR_635510.0005521.1
TkAUNG062560PF14559TPR_1938514.5e-1556.4
TkAUNG062560PF13428TPR_1438512.2e-1247.1
TkAUNG062560PF13432TPR_1639535.8e-1659.3
TkAUNG062560PF14863Alkyl_sulf_dimr421069.8e-0523.5
TkAUNG062560PF13371TPR_943752.3e-1144.3
TkAUNG062560PF07719TPR_246751.2e-2691.3
TkAUNG062560PF13428TPR_1447812.2e-1247.1
TkAUNG062560PF24575TPR_Slam48770.0002122.3
TkAUNG062560PF03704BTAD491060.0001423.0
TkAUNG062560PF13432TPR_16511115.8e-1659.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LYW9Arabidopsis thalianasp|Q9LYW9|DNJ36_ARATH DnaJ protein P58IPK homolog68.500%Swiss-ProtHigh
Q5JNB5Oryza sativa subsp. japonicasp|Q5JNB5|DJC15_ORYSJ DnaJ protein P58IPK homolog B65.300%Swiss-ProtHigh
A0A0P0VG31Oryza sativa subsp. japonicasp|A0A0P0VG31|DJC16_ORYSJ DnaJ protein P58IPK homolog A65.800%Swiss-ProtHigh

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