Gene Card
Gene overview
cDNA / CDS / Protein Sequences
780 bp · TkAUNG039140|TK1151|cDNA
ATGGCTAATAATGAAGAGGGAGATGGAACAGCTCCCAGAGGAAACGAGTGGGAAGTTGTATCACTTACTGCATCAGCATATGATGCTGCACCTGGTCCGAGACAAGTTGATTCAAGTCATGATATTCAGGGTAAGTTTGGTGGAGATGAAGAAGCTGAAGCTTCTAGTGCTATGGTTAATTCTCAACATTTCATCTTTCCTCCAAATCAGCATGAGAATGTGCCACTGGAACTCGAATACAATGAGTTAAGTGATGAAAA...
780 bp · TkAUNG039140|TK1151|CDS
ATGGCTAATAATGAAGAGGGAGATGGAACAGCTCCCAGAGGAAACGAGTGGGAAGTTGTATCACTTACTGCATCAGCATATGATGCTGCACCTGGTCCGAGACAAGTTGATTCAAGTCATGATATTCAGGGTAAGTTTGGTGGAGATGAAGAAGCTGAAGCTTCTAGTGCTATGGTTAATTCTCAACATTTCATCTTTCCTCCAAATCAGCATGAGAATGTGCCACTGGAACTCGAATACAATGAGTTAAGTGATGAAAA...
Protein
Download Protein FASTA259 aa · TkAUNG039140|TK1151|PROTEIN
MANNEEGDGTAPRGNEWEVVSLTASAYDAAPGPRQVDSSHDIQGKFGGDEEAEASSAMVNSQHFIFPPNQHENVPLELEYNELSDEKGGDFDISQLVEDKEGKSKVKNEENVSIEELMSNDIPGIPMQDEKGSYLSSTAEVHSSHHEDTIEEDAGTADISSLQDHTSDPGLLDSQMPDKRGEHDGGDLPCEACGGCYGARDYRSPMAARRWQVLHLKWQSGVSDQRMGRILGSIYRVKDVIVGGHPRGPFLRGTTSAQH
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkAUNG039140 |
|---|---|
| TK1151 ID | TkAUNG039140 |
| OH-1004 ID | LXL04_026719 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 37.300 |
| Protein coverage (%) | TK1151 37.838 / OH-1004 33.916Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkAUNG039140 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | ChrUn:10898499-10899528 (+) | |||||||||
| Description | Similar to ATI2: ATG8-interacting protein 2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0071211 protein targeting to vacuole involved in autophagy Biological Process GO:1904962 plastid to vacuole vesicle-mediated transport Biological Process GO:0005634 nucleus Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0005829 cytosol Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0031969 chloroplast membrane Cellular Component GO:0160247 autophagy cargo adaptor activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G45980 ath:AT4G00355 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.