Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

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Gene ID	`TkAUNG039140`
Query reference	TK1151
Location	ChrUn:10898499-10899528 (+)
Description	Similar to ATI2: ATG8-interacting protein 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026719 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 9 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g45980`	Involved in a special stress-induced plastid-to-vacuole protein trafficking pathway.	A new type of compartment, defined by plant-specific Atg8-interacting proteins, is induced upon exposure of Arabidopsis plants to carbon starvation.2012 · DOI: 10.1105/tpc.111.093112 Arabidopsis ATG8-INTERACTING PROTEIN1 is involved in autophagy-dependent vesicular trafficking of plastid proteins to the vacuole.2014 · DOI: 10.1105/tpc.114.129999
`At4g00355`	May be involved in salt stress-induced vesicle-to-vacuole trafficking pathway.	A new type of compartment, defined by plant-specific Atg8-interacting proteins, is induced upon exposure of Arabidopsis plants to carbon starvation.2012 · DOI: 10.1105/tpc.111.093112

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0071211	protein targeting to vacuole involved in autophagy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.959; coverage=102.098; evalue=5.45e-42; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1904962	plastid to vacuole vesicle-mediated transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.632; coverage=99.65; evalue=2.12e-32; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.959; coverage=102.098; evalue=5.45e-42; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.959; coverage=102.098; evalue=5.45e-42; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.959; coverage=102.098; evalue=5.45e-42; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.632; coverage=99.65; evalue=2.12e-32; UniProt GO evidence=IEA:GOC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009570	chloroplast stroma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.632; coverage=99.65; evalue=2.12e-32; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031969	chloroplast membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.632; coverage=99.65; evalue=2.12e-32; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0160247	autophagy cargo adaptor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.959; coverage=102.098; evalue=5.45e-42; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G45980	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=32.632; coverage=99.65; evalue=2.12e-32	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G00355	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.959; coverage=102.098; evalue=5.45e-42	UniProtKB/Swiss-Prot DAT 2026 current_release