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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkAUNG010140
Reference: TK1151 Chr: ChrUn Coordinates: 2508800-2509156 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

357 bp · TkAUNG010140|TK1151|cDNA

ATGTCCGAATTTTCACCTATTTTGATCTATTTAGTGATCAGTTCGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTTCTTCCAATAGTTCGACCTATCCAGAAAAATTGTCGGCCTACGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTTGATATACGATTTTATCTTGTTTCAATTTTATTTATTATTCCTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCCCAACAAGAT...

357 bp · TkAUNG010140|TK1151|CDS

ATGTCCGAATTTTCACCTATTTTGATCTATTTAGTGATCAGTTCGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTTCTTCCAATAGTTCGACCTATCCAGAAAAATTGTCGGCCTACGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTTGATATACGATTTTATCTTGTTTCAATTTTATTTATTATTCCTGATCCGGAAGTCACCTTTTCCTTTCCTTGGGCAGTACCTCCCAACAAGAT...

118 aa · TkAUNG010140|TK1151|PROTEIN

MSEFSPILIYLVISSLVSLIPLGVPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRFYLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG010140
TK1151 IDTkAUNG010140
OH-1004 IDLXL04_028656
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)68.100
Protein coverage (%)TK1151 58.475 / OH-1004 26.872
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG010140
LocationChrUn:2508800-2509156 (-)
DescriptionSimilar to NAD3: NADH-ubiquinone oxidoreductase chain 3
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_028656 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0022904 respiratory electron transport chain Biological Process
GO:0030964 NADH dehydrogenase complex Cellular Component
GO:0031966 mitochondrial membrane Cellular Component
GO:0008137 NADH dehydrogenase (ubiquinone) activity Molecular Function
GO:0016651 oxidoreductase activity, acting on NAD(P)H Molecular Function
KEGG gene cross-reference
rsz:13630152
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Plastid0.783
Rank 1 · TkAUNG010140 · TK1151
Endoplasmic reticulum0.137
Rank 2 · TkAUNG010140 · TK1151
Mitochondrion0.051
Rank 3 · TkAUNG010140 · TK1151
Cytoplasm0.033
Rank 4 · TkAUNG010140 · TK1151
Lysosome / Vacuole0.022
Rank 5 · TkAUNG010140 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00507Oxidored_q431-114 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG010140PF00507Oxidored_q4311142.6e-2898.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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