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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G351800
Reference: TK1151 Chr: Chr08 Coordinates: 90198817-90199482 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

666 bp · TkA08G351800|TK1151|cDNA

ATGCATCCTTGTGTCTTCATAGTTTTCTCACTTCTCTTGCTCTGTATTGAGGCTACAACTACTGGCAACCAATTGGTAGCAATGAGAGGAGGAAATAATACTAATGCTGTTATGAACAAGTGTCTGGATAAAGAGAGACATGCTCTCCTTCATTTTAAAACTCATTTTCAAGACCTCGATGATTGTCTCTCTACATGGACAACTAAAGAAGATGAGTGTTGTAAATGGTTTGGAGTCGCGTGTGACAATCAAACAGGTCA...

CDS

Download CDS FASTA

666 bp · TkA08G351800|TK1151|CDS

ATGCATCCTTGTGTCTTCATAGTTTTCTCACTTCTCTTGCTCTGTATTGAGGCTACAACTACTGGCAACCAATTGGTAGCAATGAGAGGAGGAAATAATACTAATGCTGTTATGAACAAGTGTCTGGATAAAGAGAGACATGCTCTCCTTCATTTTAAAACTCATTTTCAAGACCTCGATGATTGTCTCTCTACATGGACAACTAAAGAAGATGAGTGTTGTAAATGGTTTGGAGTCGCGTGTGACAATCAAACAGGTCA...

Protein

Download Protein FASTA

221 aa · TkA08G351800|TK1151|PROTEIN

MHPCVFIVFSLLLLCIEATTTGNQLVAMRGGNNTNAVMNKCLDKERHALLHFKTHFQDLDDCLSTWTTKEDECCKWFGVACDNQTGHVTRLEISMCAILGEISDSLLNLSYLTHLDLSFNYFHGMFPRFVGSLTKLRFLNLAGNSLYGTIPAEFGNLTNLETLVLRDVGWCRVDNLKWSHLPQLEELVMDGISLATVNNWVDVVLSIRKLSFLSLTGCDLS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G351800
TK1151 IDTkA08G351800
OH-1004 IDLXL04_004356
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)69.700
Protein coverage (%)TK1151 87.783 / OH-1004 22.084
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G351800
LocationChr08:90198817-90199482 (-)
DescriptionSimilar to EIX2: Receptor-like protein EIX2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g06940 Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940. No verified direct reference in this release
At3g05650 Receptor-like protein 32. No verified direct reference in this release
At2g24130 Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_004356 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002220 innate immune response activating cell surface receptor signaling pathway Biological Process
GO:0006898 receptor-mediated endocytosis Biological Process
GO:0007165 signal transduction Biological Process
GO:0010073 meristem maintenance Biological Process
GO:0016045 detection of bacterium Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:0050832 defense response to fungus Biological Process
GO:0052544 defense response by callose deposition in cell wall Biological Process
GO:0140426 pathogen-associated molecular pattern receptor signaling pathway Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005768 endosome Cellular Component
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-reference
ath:AT1G71400
ath:AT4G04220
ath:AT5G46330
sly:543900
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.759
Rank 1 · TkA08G351800 · TK1151
Endoplasmic reticulum0.122
Rank 2 · TkA08G351800 · TK1151
Cytoplasm0.072
Rank 3 · TkA08G351800 · TK1151
Extracellular0.061
Rank 4 · TkA08G351800 · TK1151
Nucleus0.051
Rank 5 · TkA08G351800 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF08263LRRNT_243-82 aa
PF23211LRR_LRWD184-122 aa
PF25013LRR_Zer-187-136 aa
PF13516LRR_687-98 aa
PF13855LRR_888-146 aa
PF00560LRR_188-109 aa
PF12799LRR_490-120 aa
PF23598LRR_14105-167 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G351800PF08263LRRNT_243826.5e-1039.8
TkA08G351800PF23211LRR_LRWD1841228.4e-0523.1
TkA08G351800PF25013LRR_Zer-1871360.000123.2
TkA08G351800PF13516LRR_687980.009516.6
TkA08G351800PF13855LRR_8881461e-1145.1
TkA08G351800PF00560LRR_1881091.4e-0936.9
TkA08G351800PF12799LRR_4901202.1e-0628.5
TkA08G351800PF23598LRR_141051671.7e-0834.3
TkA08G351800PF13516LRR_61101200.009516.6
TkA08G351800PF13855LRR_81111661e-1145.1
TkA08G351800PF00560LRR_11121331.4e-0936.9
TkA08G351800PF23211LRR_LRWD11242108.4e-0523.1
TkA08G351800PF13516LRR_61331440.009516.6
TkA08G351800PF12799LRR_41341652.1e-0628.5
TkA08G351800PF00560LRR_11351571.4e-0936.9
TkA08G351800PF14580LRR_91532150.1712.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9FL51Arabidopsis thalianasp|Q9FL51|Y5694_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At5g0694040.200%Swiss-ProtLow
Q9M9X0Arabidopsis thalianasp|Q9M9X0|RLP32_ARATH Receptor-like protein 3233.300%Swiss-ProtLow
Q9ZUI0Arabidopsis thalianasp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g2413039.500%Swiss-ProtLow

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