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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G206150
Reference: TK1151 Chr: Chr08 Coordinates: 53853249-53856138 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2503 bp · TkA08G206150|TK1151|cDNA

CAAAACTATACGTTTACGGACACAAAATACATATATTTGAGCACGCAAATATTTTCATAAAAACGGTATGAAAGTTGCAACAGAAAAACCCGTCACGTCCCCCTTTCCTCCTACGTCCACCGCCCTCCGCCCTTCTATCATCTCAATCCATTTCCGCCATAGCAACACATATGAATTTTCAGAAATGAAGCATAAAAGATCCACGTTCAAATCCCTAAATTTGATATCAACGAATACCGCATACATTCCATTTGCTAAGG...

CDS

Download CDS FASTA

1752 bp · TkA08G206150|TK1151|CDS

ATGGGAAATTGCATAAAGGGTTTATGCTGGCGTCGATCACAGCCTCCAAATCGAAATGAGCCAGATTCGGCGAACAAACAAATCAAAGATCCTCCACCTCCGCAACATACACCGCCACAACAGGAGACAATAACTCAACATCCACCGCCACAATCAGAACCACCACTAGAAAAACCGACTGAACAACAACAAGATATAATCAAGATAGACAAAAAGCCATCCAGAAAGGTCTCAATAGCAAACCCACAACCCAAACACAC...

Protein

Download Protein FASTA

583 aa · TkA08G206150|TK1151|PROTEIN

MGNCIKGLCWRRSQPPNRNEPDSANKQIKDPPPPQHTPPQQETITQHPPPQSEPPLEKPTEQQQDIIKIDKKPSRKVSIANPQPKHTQSVKKPQEVKRMLSAGLQNRVLKTKTGNLKDLYLLGKKLGNGQFGTTYLCKEKSTNKEFACKAIAKRKLVTDEDVEDVRREIEIMHHISGHPNVVSIKGAYEDAVSVYLVMELCGGGELFDRIIEKGHYSERKAADLAKVIVSVIEACHSNGVMHRDLKPENFLFVDNSEDSL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G206150
TK1151 IDTkA08G206150
OH-1004 IDLXL04_032806
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.300
Protein coverage (%)TK1151 97.942 / OH-1004 90.205
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G206150
LocationChr08:53853249-53856138 (-)
DescriptionSimilar to CPK10: Calcium-dependent protein kinase 10
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g04870 May play a role in signal transduction pathways that involve calcium as a second messenger.
A calcium-dependent protein kinase can inhibit a calmodulin-stimulated Ca2+ pump (ACA2) located in the endoplasmic reticulum of Arabidopsis.2000 · DOI: 10.1073/pnas.97.11.6224
At3g10660 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0788500 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
Os12g0486600 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
Os03g0789000 May play a role in signal transduction pathways that involve calcium as a second messenger. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032806 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0035556 intracellular signal transduction Biological Process
GO:0043067 regulation of programmed cell death Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:1900055 regulation of leaf senescence Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005777 peroxisome Cellular Component
GO:0005778 peroxisomal membrane Cellular Component
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
KEGG gene cross-reference
ath:AT3G10660
ath:AT5G04870
dosa:Os03g0788500
dosa:Os03g0789000
dosa:Os12g0486600
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.455
Rank 1 · TkA08G206150 · TK1151
Cell membrane0.428
Rank 2 · TkA08G206150 · TK1151
Nucleus0.194
Rank 3 · TkA08G206150 · TK1151
Golgi apparatus0.112
Rank 4 · TkA08G206150 · TK1151
Endoplasmic reticulum0.074
Rank 5 · TkA08G206150 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00069Pkinase122-378 aa
PF07714PK_Tyr_Ser-Thr122-372 aa
PF04558tRNA_synt_1c_R1138-163 aa
PF01636APH150-208 aa
PF03109ABC1194-273 aa
PF06293Kdo214-266 aa
PF14531Kinase-like224-366 aa
PF23564EF-hand_FSTL1235-266 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G206150PF00069Pkinase1223781.2e-79268.2
TkA08G206150PF07714PK_Tyr_Ser-Thr1223725.3e-2795.5
TkA08G206150PF04558tRNA_synt_1c_R11381630.2112.2
TkA08G206150PF01636APH1502080.006816.9
TkA08G206150PF03109ABC11942730.001118.9
TkA08G206150PF06293Kdo2142660.009616.1
TkA08G206150PF14531Kinase-like2243660.009116.0
TkA08G206150PF23564EF-hand_FSTL12352660.00219.2
TkA08G206150PF01636APH2382690.006816.9
TkA08G206150PF13405EF-hand_63593738.1e-2688.0
TkA08G206150PF13833EF-hand_84064483.8e-2072.1
TkA08G206150PF20742DUF5580_M4074840.0001522.5
TkA08G206150PF12763EH4164464.9e-0936.7
TkA08G206150PF12763EH4184854.9e-0936.7
TkA08G206150PF25825SAPC2_N4184857.1e-0523.3
TkA08G206150PF00069Pkinase4194621.2e-79268.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q06850Arabidopsis thalianasp|Q06850|CDPK1_ARATH Calcium-dependent protein kinase 174.500%Swiss-ProtHigh
Q38870Arabidopsis thalianasp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 272.000%Swiss-ProtHigh
Q6F3A6Oryza sativa subsp. japonicasp|Q6F3A6|CDPKA_ORYSJ Calcium-dependent protein kinase 1073.200%Swiss-ProtHigh
Q2QQR2Oryza sativa subsp. japonicasp|Q2QQR2|CDPKR_ORYSJ Calcium-dependent protein kinase 2772.100%Swiss-ProtHigh
Q852N6Oryza sativa subsp. japonicasp|Q852N6|CDPKB_ORYSJ Calcium-dependent protein kinase 1163.600%Swiss-ProtHigh

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