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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G149510
Reference: TK1151 Chr: Chr08 Coordinates: 38912785-38916708 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1389 bp · TkA08G149510|TK1151|cDNA

ATGGACTCTCGCTTTATATATATTTTATCTCCACTGCACCACCAAAGCATAGATTCTCTCCATCAAAATGTTGTAACATTTTAAATTCATTATAGCCCTTAAATCGCGATATGAAGCACATTGTGCAGCTGGTTCACTTTTGAATCTTGACATGTTTTATTCTCTTTGTAACCACACAAGCTGCCTATAAATTAAGGCCACACTACCAAAGGTGTCTCCTCAACACATAACAAGTTCTAGTGCAGTTTCTTTAAGATGAG...

CDS

Download CDS FASTA

759 bp · TkA08G149510|TK1151|CDS

ATGAGTTATACAAATGCTTCAGTTGGTTCTGGTAGTAGAAGTGGTAGGAGAAGTGTGGAGTTTGGTAGGACTTATGTTGTGAGGCCAAAAGGGAAGCACCAAGCTACGGTTGTTTGGTTGCATGGTCTTGGTGATAATGGCTCAAGTTGGTCTCAACTCTTGGATAACCTTCCTCTCCCAAACATTAAGTGGATATGCCCAACTGCTCCTACTCGCCCTGTGACCGTTCTTGGTGGATTTCCTTGCACTGCATGGTTTGA...

Protein

Download Protein FASTA

252 aa · TkA08G149510|TK1151|PROTEIN

MSYTNASVGSGSRSGRRSVEFGRTYVVRPKGKHQATVVWLHGLGDNGSSWSQLLDNLPLPNIKWICPTAPTRPVTVLGGFPCTAWFDEGELSEDGPNDVEGLDASVSHIANLLSTEPTDVKLGIGGFSMGAACALYSATCFAMGKYGNGSPYPVNLKAIVGLSGWLPGGRSLRNMIEGSQDGLRRAASLPIFLCHGRGDEVVPYKFGERSSQILSSAGFRYVAFKIYEGLGHYTVPKEMEEVCQWLNARLVG

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G149510
TK1151 IDTkA08G149510
OH-1004 IDLXL04_008557
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)84.100
Protein coverage (%)TK1151 100.000 / OH-1004 98.824
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G149510
LocationChr08:38912785-38916708 (-)
DescriptionSimilar to Lypla2: Acyl-protein thioesterase 2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_008557 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002084 protein depalmitoylation Biological Process
GO:0006631 fatty acid metabolic process Biological Process
GO:0015908 fatty acid transport Biological Process
GO:0042997 negative regulation of Golgi to plasma membrane protein transport Biological Process
GO:0046464 acylglycerol catabolic process Biological Process
GO:1905336 negative regulation of aggrephagy Biological Process
GO:1905344 prostaglandin catabolic process Biological Process
GO:0005654 nucleoplasm Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005795 Golgi stack Cellular Component
KEGG gene cross-reference
hsa:10434
hsa:11313
mmu:26394
pon:100172358
rno:83510
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.640
Rank 1 · TkA08G149510 · TK1151
Cytoplasm0.367
Rank 2 · TkA08G149510 · TK1151
Plastid0.084
Rank 3 · TkA08G149510 · TK1151
Cell membrane0.047
Rank 4 · TkA08G149510 · TK1151
Endoplasmic reticulum0.041
Rank 5 · TkA08G149510 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF02230Abhydrolase_225-248 aa
PF12146Hydrolase_432-62 aa
PF00561Abhydrolase_136-58 aa
PF12697Abhydrolase_637-155 aa
PF03959FSH181-205 aa
PF01738DLH108-232 aa
PF01764Lipase_3108-144 aa
PF12146Hydrolase_4113-136 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G149510PF02230Abhydrolase_2252481.4e-42146.7
TkA08G149510PF12146Hydrolase_432622.6e-0627.7
TkA08G149510PF00561Abhydrolase_136580.03814.4
TkA08G149510PF12697Abhydrolase_6371553.3e-0525.3
TkA08G149510PF03959FSH1812052.2e-0834.7
TkA08G149510PF01738DLH1082320.003717.6
TkA08G149510PF01764Lipase_31081440.1712.5
TkA08G149510PF12146Hydrolase_41131362.6e-0627.7
TkA08G149510PF03583LIP1181380.05413.5
TkA08G149510PF00326Peptidase_S91211370.01815.3
TkA08G149510PF00561Abhydrolase_11211370.03814.4
TkA08G149510PF12146Hydrolase_41722342.6e-0627.7
TkA08G149510PF00561Abhydrolase_11782330.03814.4
TkA08G149510PF12697Abhydrolase_61822423.3e-0525.3
TkA08G149510PF03583LIP1862510.05413.5
TkA08G149510PF00326Peptidase_S91882450.01815.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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