Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1164 bp · TkA08G129230|TK1151|cDNA
ATTCCATAACGACATTAGCCATTTAGCCTACTCTCCTACAATAACCAGATAATGTTTTCACACCGCACCACACTAAATACTTAAATCCATCATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCGTACACCATGGGCCCTACTCTTTTGGACGCACTCAATGTCCGAGTAGTTGGCTCCGGCAAGAAGTTCATGGTTCTGGCGCACGGATTGGGCACCGATCAGTCTGTGTGGAGTCGCATTCTCC...
801 bp · TkA08G129230|TK1151|CDS
ATGGGCCCTACTCTTTTGGACGCACTCAATGTCCGAGTAGTTGGCTCCGGCAAGAAGTTCATGGTTCTGGCGCACGGATTGGGCACCGATCAGTCTGTGTGGAGTCGCATTCTCCCCTACTTCCGCTCTCACTACAGAGTCATCCTCTACGACCTTGTCTTCGCCGGCAGCGTTAACCCTGACTACTTCGATTTCAATCGCTACAACTCTCTAGACGCCTATGTCGACGACCTCCTCCAAATCCTTGACTCTCTCGGTGT...
Protein
Download Protein FASTA266 aa · TkA08G129230|TK1151|PROTEIN
MGPTLLDALNVRVVGSGKKFMVLAHGLGTDQSVWSRILPYFRSHYRVILYDLVFAGSVNPDYFDFNRYNSLDAYVDDLLQILDSLGVDRCYYVGHSLSSMIGILAAIRRPELFSKLILVGASPRFLNDKDYHGGFEEGEVEKVFLAMESNYEAWVNGFAPLAVGADVPTAVREFSRTLFNMRPDISLFVSRTVFNSDLRGVLGLVKVPCCIIQTAKDVSVPTSVATYLKEHLGGRNTVEMMNVEGHLPHLSHPVMLAHHL...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G129230 |
|---|---|
| TK1151 ID | TkA08G129230 |
| OH-1004 ID | LXL04_031769 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 96.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G129230 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:33526454-33527869 (-) | ||||||||||||
| Description | Similar to DAD2: Probable strigolactone esterase DAD2 | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
| ||||||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0010223 secondary shoot formation Biological Process GO:0036377 arbuscular mycorrhizal association Biological Process GO:0080167 response to karrikin Biological Process GO:1901601 strigolactone biosynthetic process Biological Process GO:1902348 cellular response to strigolactone Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0016787 hydrolase activity Molecular Function GO:0016788 hydrolase activity, acting on ester bonds Molecular Function | ||||||||||||
| KEGG gene cross-reference | ath:AT3G03990 dosa:Os03g0203200 dosa:Os03g0437600 osa:4333199 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF12146Hydrolase_418-121 aaPF00561Abhydrolase_121-133 aaPF12697Abhydrolase_621-254 aaPF03096Ndr66-123 aaPF12146Hydrolase_4202-234 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA08G129230 | PF12146 | Hydrolase_4 | 18 | 121 | 3.4e-05 | 24.0 |
| TkA08G129230 | PF00561 | Abhydrolase_1 | 21 | 133 | 2.5e-15 | 57.5 |
| TkA08G129230 | PF12697 | Abhydrolase_6 | 21 | 254 | 1.2e-12 | 49.6 |
| TkA08G129230 | PF03096 | Ndr | 66 | 123 | 0.3 | 10.5 |
| TkA08G129230 | PF12146 | Hydrolase_4 | 202 | 234 | 3.4e-05 | 24.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.