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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G065240
Reference: TK1151 Chr: Chr08 Coordinates: 16678632-16681475 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1497 bp · TkA08G065240|TK1151|cDNA

ACCACCACCACCGTATCTCTCTCCTCACGACGGCGACTTCCAATCACACACAGTGGACAAAAAAATGGGAAGATCATTCCGTTATGTGATAATCGGTGGAGGTGTCGCTGCTGGTTATGCAGCTCTCGAATTCACCAAAAAAGGCGTCTCTCATGGTGAACTCTGCATCATCTCCGACGAACCTGTGGCTCCTTATGAGCGACCAGCACTCAGCAAAGGGTTTCTACTTCCAGAAGCTTCTGCACGTCTCCCTGGCTTTC...

CDS

Download CDS FASTA

1383 bp · TkA08G065240|TK1151|CDS

ATGGGAAGATCATTCCGTTATGTGATAATCGGTGGAGGTGTCGCTGCTGGTTATGCAGCTCTCGAATTCACCAAAAAAGGCGTCTCTCATGGTGAACTCTGCATCATCTCCGACGAACCTGTGGCTCCTTATGAGCGACCAGCACTCAGCAAAGGGTTTCTACTTCCAGAAGCTTCTGCACGTCTCCCTGGCTTTCATACTTGTGTAGGTGCCAATGAAGAGAGGTTAACACCCAATTGGTACAAAGAATATGGGATAGA...

Protein

Download Protein FASTA

460 aa · TkA08G065240|TK1151|PROTEIN

MGRSFRYVIIGGGVAAGYAALEFTKKGVSHGELCIISDEPVAPYERPALSKGFLLPEASARLPGFHTCVGANEERLTPNWYKEYGIELILGTRVESIDVRRKTLLTTTGETISYKFLIIATGSRAVKLEEIGIKGSDAENVCYLHDLADATNLVNIMQKCSGGNAIVVGGGYIGMECAASLVANKINVSIVFPGPHCMERLFTPKIASYYEDFYKSKGVNFVKGTSLSSFEFNSEGMVTGANLRDGRQLPADMIVVGIGA...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G065240
TK1151 IDTkA08G065240
OH-1004 IDLXL04_018503
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.600
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G065240
LocationChr08:16678632-16681475 (-)
DescriptionSimilar to MDAR4: Monodehydroascorbate reductase 4, peroxisomal
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g27820 Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process.
Arabidopsis peroxisomes possess functionally redundant membrane and matrix isoforms of monodehydroascorbate reductase.2005 · DOI: 10.1111/j.1365-313x.2005.02503.x
MONODEHYROASCORBATE REDUCTASE4 is required for seed storage oil hydrolysis and postgerminative growth in Arabidopsis.2007 · DOI: 10.1105/tpc.106.043992

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0707100 Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process. No verified direct reference in this release
Os02g0707000 Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process. No verified direct reference in this release
Os09g0567300 Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018503 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0042744 hydrogen peroxide catabolic process Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005778 peroxisomal membrane Cellular Component
GO:0009941 chloroplast envelope Cellular Component
GO:0016656 monodehydroascorbate reductase (NADH) activity Molecular Function
KEGG gene cross-reference
ath:AT3G27820
dosa:Os02g0707000
dosa:Os02g0707100
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.373
Rank 1 · TkA08G065240 · TK1151
Cytoplasm0.273
Rank 2 · TkA08G065240 · TK1151
Peroxisome0.235
Rank 3 · TkA08G065240 · TK1151
Plastid0.131
Rank 4 · TkA08G065240 · TK1151
Nucleus0.106
Rank 5 · TkA08G065240 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13241NAD_binding_75-39 aa
PF07992Pyr_redox_26-320 aa
PF13738Pyr_redox_36-28 aa
PF00070Pyr_redox7-29 aa
PF01266DAO7-28 aa
PF03486HI0933_like7-27 aa
PF01134GIDA8-28 aa
PF04820Trp_halogenase8-27 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G065240PF13241NAD_binding_75390.0117.1
TkA08G065240PF07992Pyr_redox_263201.7e-56192.5
TkA08G065240PF13738Pyr_redox_36281.3e-0835.1
TkA08G065240PF00070Pyr_redox7292.2e-1764.1
TkA08G065240PF01266DAO7288.7e-0729.5
TkA08G065240PF03486HI0933_like7270.0006620.0
TkA08G065240PF01134GIDA8280.03413.9
TkA08G065240PF04820Trp_halogenase8270.1511.6
TkA08G065240PF29717AF_1314_N8260.2612.4
TkA08G065240PF00890FAD_binding_28280.3110.9
TkA08G065240PF13450NAD_binding_89280.2112.6
TkA08G065240PF03486HI0933_like801260.0006620.0
TkA08G065240PF00070Pyr_redox821032.2e-1764.1
TkA08G065240PF13738Pyr_redox_3822951.3e-0835.1
TkA08G065240PF01266DAO821258.7e-0729.5
TkA08G065240PF01593Amino_oxidase871270.01715.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LK94Arabidopsis thalianasp|Q9LK94|MDAR4_ARATH Monodehydroascorbate reductase 4, peroxisomal65.600%Swiss-ProtHigh
Q8S3R2Oryza sativa subsp. japonicasp|Q8S3R2|MDAR2_ORYSJ Monodehydroascorbate reductase 2, peroxisomal63.200%Swiss-ProtHigh
Q8S3R1Oryza sativa subsp. japonicasp|Q8S3R1|MDAR1_ORYSJ Monodehydroascorbate reductase 1, peroxisomal61.400%Swiss-ProtHigh
Q652L6Oryza sativa subsp. japonicasp|Q652L6|MDAR3_ORYSJ Monodehydroascorbate reductase 3, cytosolic52.600%Swiss-ProtHigh

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