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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G061390
Reference: TK1151 Chr: Chr08 Coordinates: 15729067-15733425 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3343 bp · TkA08G061390|TK1151|cDNA

GATTCAACGTCCATGATCTGTCGGCTCCTTACAACGGACCCTACAGATTCGAATTCAAACCAGGACTAACGGTCATCTCTGCAACTTAATTGAAAACTCCACATTCCCATGGTTCTTCTGCCAAGAAGATACACATATTGAACCCACTATTCACTTCACTCACTAATCCTTCTCTCTCGATTTTAGGGTTTTCACTTTCCTCTCTCTACTTTCAGTACAAAATTGTCGTTGACGTAGAAAACCCTTTTTTCTCGACGGTT...

CDS

Download CDS FASTA

2724 bp · TkA08G061390|TK1151|CDS

ATGGAGGTGATTGCGTCAAGAACAAGTCATGATTTTAATTTGGCTTCAAGAAAAGCCCAAGAAGCTGTTTGGAGGAGGTATCAAGCTACCGAATGGCTTGAGAGTTTCGTGGGTTCATTAGGTATATCAAAGCAGCCATCGGAGAAGGAGTTCATTTCTTGCTTGAGAAATGGATTGATTCTCTGCAACGCCATTAACAAAATTCAACCTGGGTCTGTCCCAAAGGTGGTGGAGATTACTCGGTTTCATTCCCAACCGCA...

Protein

Download Protein FASTA

907 aa · TkA08G061390|TK1151|PROTEIN

MEVIASRTSHDFNLASRKAQEAVWRRYQATEWLESFVGSLGISKQPSEKEFISCLRNGLILCNAINKIQPGSVPKVVEITRFHSQPHTWDSQPLPAYQFFENVRNFLKAVEGLNLPVFEASVFERDNLEAGSSTKIVDCVLGLKDYTERKNGSSKRTMRSPLMHSSSKIPRSGLNLDPNRQLDLSTNREKQSPSQNDAKKLEDLLLKALDDCMIDAKENLDGNLLSSIRNGNMDSIKSLSRILSSTLQEQLQLKLNPNLN...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G061390
TK1151 IDTkA08G061390
OH-1004 IDLXL04_018914
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)47.200
Protein coverage (%)TK1151 78.390 / OH-1004 74.227
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G061390
LocationChr08:15729067-15733425 (+)
DescriptionSimilar to KIN14I: Kinesin-like protein KIN-14I
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g10310 Kinesin-like protein KIN-14L. No verified direct reference in this release
At5g27000 Microtubule-binding motor protein. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0243100 Kinesin-like protein KIN-14A. No verified direct reference in this release
Os11g0672400 Kinesin-like protein KIN-14P. No verified direct reference in this release
Os12g0547500 Minus end-directed motor protein that transports actin filaments along microtubules.
Dynamic bridges--a calponin-domain kinesin from rice links actin filaments and microtubules in both cycling and non-cycling cells.2009 · DOI: 10.1093/pcp/pcp094
A kinesin with calponin-homology domain is involved in premitotic nuclear migration.2010 · DOI: 10.1093/jxb/erq164
The non-processive rice kinesin-14 OsKCH1 transports actin filaments along microtubules with two distinct velocities.2015 · DOI: 10.1038/nplants.2015.111
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018914 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007017 microtubule-based process Biological Process
GO:0007018 microtubule-based movement Biological Process
GO:0007097 nuclear migration Biological Process
GO:0031534 minus-end directed microtubule sliding Biological Process
GO:0051647 nucleus localization Biological Process
GO:0005634 nucleus Cellular Component
GO:0005874 microtubule Cellular Component
GO:0015629 actin cytoskeleton Cellular Component
GO:0015630 microtubule cytoskeleton Cellular Component
GO:0003777 microtubule motor activity Molecular Function
GO:0003779 actin binding Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT2G47500
ath:AT5G27000
dosa:Os03g0301800
dosa:Os12g0547500
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.708
Rank 1 · TkA08G061390 · TK1151
Nucleus0.288
Rank 2 · TkA08G061390 · TK1151
Cell membrane0.109
Rank 3 · TkA08G061390 · TK1151
Golgi apparatus0.044
Rank 4 · TkA08G061390 · TK1151
Mitochondrion0.041
Rank 5 · TkA08G061390 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00307CH26-144 aa
PF27821CEP162_helical_3184-204 aa
PF15035Rootletin252-335 aa
PF10368YkyA295-360 aa
PF25764KIF21A_4th296-366 aa
PF07926TPR_MLP1_2305-348 aa
PF14197Cep57_CLD_2321-337 aa
PF27821CEP162_helical_3325-334 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G061390PF00307CH261441.2e-1042.3
TkA08G061390PF27821CEP162_helical_31842046.17.8
TkA08G061390PF15035Rootletin2523350.1313.0
TkA08G061390PF10368YkyA2953602.08.8
TkA08G061390PF25764KIF21A_4th2963660.4610.8
TkA08G061390PF07926TPR_MLP1_23053482.29.0
TkA08G061390PF14197Cep57_CLD_23213371.69.6
TkA08G061390PF27821CEP162_helical_33253346.17.8
TkA08G061390PF29809YycH_C3373830.1112.5
TkA08G061390PF16796Microtub_bd3495082e-41142.2
TkA08G061390PF00225Kinesin3976894.3e-106355.3
TkA08G061390PF29809YycH_C4755170.1112.5
TkA08G061390PF27821CEP162_helical_36927216.17.8
TkA08G061390PF15035Rootletin6947200.1313.0
TkA08G061390PF07926TPR_MLP1_26947322.29.0
TkA08G061390PF14197Cep57_CLD_26957211.69.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4J2M6Arabidopsis thalianasp|F4J2M6|KN14L_ARATH Kinesin-like protein KIN-14L53.800%Swiss-ProtHigh
O81635Arabidopsis thalianasp|O81635|KN14G_ARATH Kinesin-like protein KIN-14G46.300%Swiss-ProtMedium
B9EUM5Oryza sativa subsp. japonicasp|B9EUM5|KN14A_ORYSJ Kinesin-like protein KIN-14A47.300%Swiss-ProtMedium
B9G8P1Oryza sativa subsp. japonicasp|B9G8P1|KN14P_ORYSJ Kinesin-like protein KIN-14P46.700%Swiss-ProtMedium
Q0IMS9Oryza sativa subsp. japonicasp|Q0IMS9|KN14Q_ORYSJ Kinesin-like protein KIN-14Q48.400%Swiss-ProtMedium

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