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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G057260
Reference: TK1151 Chr: Chr08 Coordinates: 14643137-14648606 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3467 bp · TkA08G057260|TK1151|cDNA

CTCATTCATCCCGCTGCTTTTCACTTCATTTTCATCAAATCAGATTAGTTCGAAGAGAGAAGGAGAGTGAGAGATCGAGAAAGCGAACATTCGATCGAATTTGAAGCAACGGAGCTTCAATCTTTCTTCTTTCACACACCAGCACACAAAATCCGTGTGTAAATATGTCCTTTCGCCATGAAAAAGGCGTCAATGTCCAGGTGCTATTGCGTTGCAGGCCGTTTAGTAGCGACGAGTTAAAGAACAATGCACCTCAGGTG...

CDS

Download CDS FASTA

2082 bp · TkA08G057260|TK1151|CDS

ATGTCCTTTCGCCATGAAAAAGGCGTCAATGTCCAGGTGCTATTGCGTTGCAGGCCGTTTAGTAGCGACGAGTTAAAGAACAATGCACCTCAGGTGGTAACGTGTAACGAGTATCAGAGAGAAGTTGCGGTTTCGCAGAGTATTGCTGGGAAGCAAATAGATAGGGTTTTTACATTTGACAAGGTTTTTGGCCCTAAAGCTCAGCAAAAAGATTTATACGAAGAAGCTGTAATACCAATTGTAAACGAAGTTCTAGAAGG...

Protein

Download Protein FASTA

693 aa · TkA08G057260|TK1151|PROTEIN

MSFRHEKGVNVQVLLRCRPFSSDELKNNAPQVVTCNEYQREVAVSQSIAGKQIDRVFTFDKVFGPKAQQKDLYEEAVIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRAKSGPNGELPLEAGVIPRSVKQIFDTLEGQNAEYSVKVTFLELYNEEITDLLAPEEVSKVGVEDKQKKLLPLMEDGKGGVLVRGLEEEIVTSASEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIHIKESTPEGEELIKCGKLN...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G057260
TK1151 IDTkA08G057260
OH-1004 IDLXL04_018362
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)98.800
Protein coverage (%)TK1151 92.929 / OH-1004 63.826
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G057260
LocationChr08:14643137-14648606 (+)
DescriptionSimilar to KIN5C: Kinesin-like protein KIN-5C
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g36200 Responsible for microtubule translocation. No verified direct reference in this release
At3g45850 Responsible for microtubule translocation. No verified direct reference in this release
At2g28620 Responsible for microtubule translocation. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os08g0558400 Responsible for microtubule translocation. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018362 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0051231 spindle elongation Biological Process
GO:0090307 mitotic spindle assembly Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005876 spindle microtubule Cellular Component
GO:0072686 mitotic spindle Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
GO:0008574 plus-end-directed microtubule motor activity Molecular Function
KEGG gene cross-reference
ath:AT2G36200
dosa:Os05g0117798
nta:107774014
osa:9268593
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.726
Rank 1 · TkA08G057260 · TK1151
Nucleus0.237
Rank 2 · TkA08G057260 · TK1151
Golgi apparatus0.091
Rank 3 · TkA08G057260 · TK1151
Cell membrane0.089
Rank 4 · TkA08G057260 · TK1151
Mitochondrion0.057
Rank 5 · TkA08G057260 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd10-164 aa
PF00225Kinesin16-357 aa
PF04048Sec8_N68-98 aa
PF13479AAA_2491-106 aa
PF11055Gsf2364-455 aa
PF19387DUF5962370-443 aa
PF16796Microtub_bd404-443 aa
PF24627PUMA_CC405-435 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G057260PF16796Microtub_bd101648.2e-2691.5
TkA08G057260PF00225Kinesin163571.3e-115386.6
TkA08G057260PF04048Sec8_N68980.04414.4
TkA08G057260PF13479AAA_24911061.59.2
TkA08G057260PF11055Gsf23644550.001917.8
TkA08G057260PF19387DUF59623704430.212.7
TkA08G057260PF16796Microtub_bd4044438.2e-2691.5
TkA08G057260PF24627PUMA_CC4054353.58.4
TkA08G057260PF25450Rab11-FIP34064821.110.3
TkA08G057260PF01496V_ATPase_I4066436.05.4
TkA08G057260PF08614ATG164065186.17.7
TkA08G057260PF07889DUF16644104822.48.9
TkA08G057260PF13479AAA_244125341.59.2
TkA08G057260PF24627PUMA_CC4154783.58.4
TkA08G057260PF23338PTHB1_hp4294695.28.3
TkA08G057260PF04048Sec8_N4314820.04414.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
P82266Arabidopsis thalianasp|P82266|KN5C_ARATH Kinesin-like protein KIN-5C74.400%Swiss-ProtHigh
Q9LZU5Arabidopsis thalianasp|Q9LZU5|KN5D_ARATH Kinesin-like protein KIN-5D60.700%Swiss-ProtHigh
F4IIS5Arabidopsis thalianasp|F4IIS5|KN5A_ARATH Kinesin-like protein KIN-5A56.800%Swiss-ProtHigh
B7EJ91Oryza sativa subsp. japonicasp|B7EJ91|KN5C_ORYSJ Kinesin-like protein KIN-5C72.800%Swiss-ProtHigh

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